LOCUS BC042057 1898 bp mRNA linear HUM 19-JUL-2004
DEFINITION Homo sapiens papilin, proteoglycan-like sulfated glycoprotein, mRNA
(cDNA clone IMAGE:5588745), complete cds.
ACCESSION BC042057
VERSION BC042057.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1898)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1898)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 88 Row: h Column: 7
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1898
/db_xref="H-InvDB:HIT000052642"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5588745"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1898
/gene="PAPLN"
/gene_synonym="MGC50452"
/db_xref="GeneID:89932"
CDS 53..442
/gene="PAPLN"
/gene_synonym="MGC50452"
/codon_start=1
/product="PAPLN protein"
/protein_id="AAH42057.1"
/db_xref="GeneID:89932"
/translation="MRLLLLVPLLLAPAPGSSAPKVRRQSDTWGPWSQWSPCSRTCGG
GVSFRERPCYSQRRDGGSSCVGPARSHRSCRTESCPDGARDFRAEQCAEFDGAEFQGR
RYRWLPYYSAPNKCELNCIPKVLGLQA"
BASE COUNT 519 a 449 c 480 g 450 t
ORIGIN
1 cgacggagcg gccctggctg cagcctcccg gcgccagcga agacaggctg agatgcggct
61 gctcctgctc gtgccgctgc tgctggctcc agcgcccggg tcctcggctc ccaaggtgag
121 gcggcagagt gacacctggg gaccctggag ccagtggagc ccctgcagcc ggacctgtgg
181 agggggtgtc agcttccggg agcgcccctg ctactcccag aggagagatg gaggctccag
241 ctgcgtgggc cccgcccgga gccaccgctc ttgtcgcacg gagagctgcc ccgacggcgc
301 ccgggacttc cgggccgagc agtgcgcgga gttcgacgga gcggagttcc aggggcggcg
361 gtatcggtgg ctgccctact acagcgcccc aaacaagtgt gaactgaact gcattcccaa
421 agtgctggga ttacaggcat gagccaccac gcccagccat caatgcattt tttttatttt
481 tttttttgag acagagtttc gcacttcttg cccaggctgg agtacaatgg tgcgatcttg
541 gctcactgca acctccacct cctgggttca agcgcttctc cagcctcagc ctcctgagta
601 gctgggatta caggtatgtg ccaccatgcc tggctaattt tgtattttta gtagagacgg
661 ggtttctcca tgttggtcag actggtcttg aactcccgac ctcaggtaat ccgcccgcct
721 cggcctccca aaatgctggg attagaggtg tgagccactg tgcccagccc atcaatgtgt
781 tttaaagcta gctgtcaggg ttccacttaa tttaaagctg ggcagggaga tgtgtaatga
841 tttcaaagtt aacacctgtt tgttttctaa agggcatgcc aagtcctgct gtatcaggga
901 agtattctgt gctaaaatca gcgatggttc attgctctag tctctctcac ccttctaggc
961 agtgcatcag tcagctctaa atctggtgca gagggttaac agcataaccc ttgttggcaa
1021 aatggaatag atgttaagac ctcaaatagg gatttgggat gaaacagctg cagttagcac
1081 tgttatctga gcatgaaaga actggaaacg ctccttacgt cgagatgttg gaccttgaag
1141 ccctcctgag gccaacatgc aaatctggct gtgacggttc atctgacacc tgtgtaaagc
1201 tgaccagcct gctctgtaca gtgacaatga ggagcccctc tcttccttaa gtaggaatct
1261 gtgaagcaaa atgtttgctg ccaaagacaa atcagactgt cagtcattaa aaacagcatt
1321 agcaggatga ggatagcaat ggggaagggt tgtgggcaat gcagtaacag ggaaatggct
1381 tcagaaatgg tttgagttgg aagacaacat tcttcatctc tcaggacttc taattccttg
1441 atgctaaaag aagaggcatg gattctatga gcttccaagt ccctttccac tttaaccttc
1501 tacaaatctt tcagaggact gcctagtagc aaaggttatt cctggacaca ggaaagacgg
1561 gcattacagg gaccaaagct ctgaaaggtg acttttatta ccaacacact ggctggaaaa
1621 gggacaaacc acatcacggg tgagtgatac ttctcagtct tctctactca ttcaacaaag
1681 gaaatgtggg ctggggcaga ggtctttttt tcatttaata ctggaaaaat attgaagagc
1741 atccatgttc acttatggct ggttttgcta tagaaattgg aaaataaagg ccactttttt
1801 gaaatcccca gtttaattaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//