LOCUS BC042038 893 bp mRNA linear HUM 14-SEP-2006 DEFINITION Homo sapiens chromosome 3 open reading frame 46, mRNA (cDNA clone IMAGE:4828419), complete cds. ACCESSION BC042038 VERSION BC042038.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 893) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 893) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 90 Row: i Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..893 /db_xref="H-InvDB:HIT000052638" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4828419" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..893 /gene="C3orf46" /db_xref="GeneID:255330" /db_xref="HGNC:HGNC:27399" CDS 245..655 /gene="C3orf46" /codon_start=1 /product="C3orf46 protein" /protein_id="AAH42038.1" /db_xref="GeneID:255330" /db_xref="HGNC:HGNC:27399" /translation="MGKGTVSGLVQVVDAETGKVVIISQDLVQVKVLLLGAVRIRSPI MQIRMGTQLGKNWIHLPLLEGGSTASGGIPSAGTPLVTRPDFSPPMSIYITWITNHQN PFSFGNAMPGLTFHWSVTKRDILDLQGQHHKMSH" BASE COUNT 231 a 242 c 213 g 207 t ORIGIN 1 gttaggttat gacaggagca gcactgcagc cacaagccat ggcagtcgtg gcccggggat 61 cattccaagt ctatttacag cagcaacatt aaaccagccc tgccaacatc ctccctgtgc 121 ttgggccacg ctggggctgg tcacctctga gggcagcccc cagcctcagt ccaacatcct 181 tttctccatc agcaactaga acgttgcact ggtgagcgct tccaggctgg taccaggtct 241 caccatgggg aagggcactg tgtctgggct tgtgcaggtg gtggatgcag agactggcaa 301 ggtggtcatc atctctcagg acctcgttca ggtgaaggtg ctgctgcttg gagccgtgag 361 gatccgcagc cccatcatgc agataaggat gggcacccag ctggggaaga attggataca 421 tctcccactg cttgaaggag gcagcacagc ttctgggggc attcccagtg ctggcacccc 481 gctggtcacc aggcctgact tctccccacc gatgtccatc tatatcacct ggatcaccaa 541 ccaccagaac cctttctcct ttggcaatgc catgccaggc ctgaccttcc actggtctgt 601 caccaagcgg gacatcctgg atctccaagg gcagcatcac aagatgagcc attaagtcca 661 gcccacattc aaggggagag gaagtaagca tcacctcagg cacagaagaa cagaaagaag 721 ttgtgtgcat atctttaaga caaccacata ccaggaactg cttttttttg gtatagaaac 781 tatcttttta aaaatttacc cttgacattt ggaaacttca tccagctatg tctgatttgc 841 aaattcaggt atatctttaa aataattttc tttgatcaaa aaaaaaaaaa aaa //