LOCUS BC042037 1451 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens heparan-alpha-glucosaminide N-acetyltransferase, mRNA
(cDNA clone IMAGE:5259991), partial cds.
ACCESSION BC042037
VERSION BC042037.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1451)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1451)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: m Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..1451
/db_xref="H-InvDB:HIT000097072"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5259991"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..1451
/gene="HGSNAT"
/gene_synonym="FLJ22242"
/gene_synonym="FLJ32731"
/gene_synonym="HGNAT"
/db_xref="GeneID:138050"
/db_xref="HGNC:HGNC:26527"
CDS <1..662
/gene="HGSNAT"
/gene_synonym="FLJ22242"
/gene_synonym="FLJ32731"
/gene_synonym="HGNAT"
/codon_start=3
/product="HGSNAT protein"
/protein_id="AAH42037.1"
/db_xref="GeneID:138050"
/db_xref="HGNC:HGNC:26527"
/translation="VGRALAALLLAASVLSAALLAPGGSSGRDAQAAPPRDLDKKRHA
ELKMDQALLLIHNELLWTNLTVYWKSECCYHCLFQVLVNVPQSPKAGKPSAAAASVST
QHGSILQLNDTLEEKEVCRLEYRFGEFGNYSLLVKNIHNGVSEIACDLAVNEDPVDSN
LPVSIAFLIGLAVIIVISFLRLLLRVLLCHPGWSAVAPSRLTPSSASRVHTILLPQPP
E"
BASE COUNT 332 a 364 c 389 g 366 t
ORIGIN
1 gggtgggcag ggcgctggcc gcgctgctgc tggccgcgtc cgtgctgagc gccgcgctgc
61 tggcccccgg cggctcttcg gggcgcgatg cccaggccgc gccgccacga gacttagaca
121 aaaaaagaca tgcagagctg aagatggatc aggctttgct actcatccat aatgaacttc
181 tctggaccaa cttgaccgtc tactggaaat ctgaatgctg ttatcactgc ttgtttcagg
241 ttctggtaaa cgttcctcag agtccaaaag cagggaagcc tagtgctgca gctgcctctg
301 tcagcaccca gcacggatct atcctgcagc tgaacgacac cttggaagag aaagaagttt
361 gtaggttgga atacagattt ggagaatttg gaaactattc tctcttggta aagaacatcc
421 ataatggagt tagtgaaatt gcctgtgacc tggctgtgaa cgaggatcca gttgatagta
481 accttcctgt gagcattgca ttccttattg gtcttgctgt catcattgtg atatcctttc
541 tgaggctctt gttgagagtc ttgctatgtc acccaggctg gagtgcggtg gcaccatctc
601 ggctcactcc aagctctgcc tcccgggttc acaccattct cctacctcag cctcctgagt
661 agctggaact gcagtttgga tgactttaac aattggattt ctaaagccat aagttctcga
721 gaaactgatc gcctaatcaa ttctgagctg ggatctccca gcaggacaga ccctctcgat
781 ggtgatgttc agccagcaac gtggcgtcta tctgccctgc cgccccgcct ccgcagcgtg
841 gacaccttca gggggattgc tcttatactc atggtctttg tcaattatgg aggaggaaaa
901 tattggtact tcaaacatgc aagttggaat gggctgacag tggctgacct cgtgttcccg
961 tggtgagttg ccggtctgcc ctcttctctt ccacgggttg actccaatct cctgtttttc
1021 agatgatgct ggagcctctc ttctgagacg ggcatgtgtt atgtggttag gaagtccttc
1081 caaaagtcct gttactggat agttctcata cttgacccgg tgcctacacg tgtgtataaa
1141 agagtgattt gtggccgggc gcggtggctc acgcctgtaa tcctagcact ttgggaggct
1201 gaggcaggcg aattacctga ggtcaggagt tcaagaccag cctggccaac atggtgaaac
1261 tctgtctcta ctaaaaatac aaaaaattag ctgggtgcag tggcacgtgc ctgtaatccc
1321 agctactcgg gaggctgagg aaggagaatc acttgaaccc aggaggcggg ggttgcggtg
1381 agcagagatc acgccactgc actccagcct gggcgacaga gtgagacttc atctcaaaaa
1441 aaaaaaaaaa a
//