LOCUS BC042019 2072 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens neuritin 1, mRNA (cDNA clone MGC:44811 IMAGE:5312094),
complete cds.
ACCESSION BC042019
VERSION BC042019.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2072)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2072)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 77 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34878876.
FEATURES Location/Qualifiers
source 1..2072
/db_xref="H-InvDB:HIT000052636"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44811 IMAGE:5312094"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2072
/gene="NRN1"
/gene_synonym="dJ380B8.2"
/gene_synonym="MGC44811"
/gene_synonym="NRN"
/db_xref="GeneID:51299"
/db_xref="HGNC:HGNC:17972"
/db_xref="MIM:607409"
CDS 653..1081
/gene="NRN1"
/gene_synonym="dJ380B8.2"
/gene_synonym="MGC44811"
/gene_synonym="NRN"
/codon_start=1
/product="neuritin 1"
/protein_id="AAH42019.1"
/db_xref="GeneID:51299"
/db_xref="HGNC:HGNC:17972"
/db_xref="MIM:607409"
/translation="MGLKLNGRYISLILAVQIAYLVQAVRAAGKCDAVFKGFSDCLLK
LGDSMANYPQGLDDKTNIKTVCTYWEDFHSCTVTALTDCQEGAKDMWDKLRKESKNLN
IQGSLFELCGSGNGAAGSLLPAFPVLLVSLSAALATWLSF"
BASE COUNT 544 a 487 c 504 g 537 t
ORIGIN
1 aaaacccccc tgcatcgtag agagcgggct ggattctctg tggtgctgat ggaggagggg
61 gagcaggttg aaacaatcga gtgggcgcgc caggactccc cagctcctgg cggggaaggg
121 agggggagcc actgttctgc gcagggaggc ggcggggctg gggggccccc ggaacgagga
181 agaggcaggg gtgaccgcta gaataggaaa gtgctcaccc ccgggaggca aaatttcgtt
241 cagatcgcac attaattgga gatatctgat taattccagc ttctgatgac tataaatggc
301 gattctctac caaggtgtct atattaaaaa aaaaaatcat tccgtgtcat cccccacgtc
361 aggcctgctc gtgggcgtga ggctgtactt cctccgcccc cttctaatgg agtgaaccat
421 tcccagctct ccccccccct cagcctctct ctctctctct ctttctctct ctctctctct
481 ttctgtctct tcctcgctcc ctctctttct ctcctccctc tgccttccca gtgcataaag
541 tctctgtcgc tcccggaact tgttggcaat gcctattttt tggctttccc ccgcgttctc
601 taaactaact atttaaaggt ctgcggtcgc aaatggtttg actaaacgta ggatgggact
661 taagttgaac ggcagatata tttcactgat cctcgcggtg caaatagcgt atctggtgca
721 ggccgtgaga gcagcgggca agtgcgatgc ggtcttcaag ggcttttcgg actgtttgct
781 caagctgggc gacagcatgg ccaactaccc gcagggcctg gacgacaaga cgaacatcaa
841 gaccgtgtgc acatactggg aggatttcca cagctgcacg gtcacagccc ttacggattg
901 ccaggaaggg gcgaaagata tgtgggataa actgagaaaa gaatccaaaa acctcaacat
961 ccaaggcagc ttattcgaac tctgcggcag cggcaacggg gcggcggggt ccctgctccc
1021 ggcgttcccg gtgctcctgg tgtctctctc ggcagcttta gcgacctggc tttccttctg
1081 agcgtggggc cagctccccc cgcgcgccca cccacactca ctccatgctc ccggaaatcg
1141 agaggaagat ccattagttc tttggggacg ttgtgattct ctgtgatgct gaaaacactc
1201 atataggatt gtgggaaatc ctgattctct tttttatttc gtttgatttc ttgtgtttta
1261 tttgccaaat gttaccaatc agtgagcaag caagcacagc caaaatcgga cctcagcttt
1321 agtccgtctt cacacacaaa taagaaaacg gcaaacccac cccatttttt aattttatta
1381 ttattaattt tttttgttgg caaaagaatc tcaggaacgg cgctgggcca cctactatat
1441 taatcatgct agtaacatga aaaatgatgg gctcctccta ataggaaggc gaggagagga
1501 gaaggccagg ggaatgaatt caagagagat gtccacggac gaaacatacg gtgaataatt
1561 cacgctcacg tcgttcttcc acagtatctt gttttgatca tttccactgc acatttctcc
1621 tcaagaaaag cgaaaggaca gactgttggc tttgtgtttg gaggatagga gggagagagg
1681 gaaggggctg aggaaatctc tggggtaaga gtaaagtctt ccagaagaca tgctgctatg
1741 gtcactgagg ggttagcttt atctgctgtt gttgatgcat ccgtccaagt tcactgcctt
1801 tattttccct cctccctctt gttttagctg ttacacacac agtaatacct gaatatccaa
1861 cggtatagat cacaaggggg ggatgttaaa tgttaatcta aaatatagct aaaaaaagat
1921 tttgacataa aagagccttg attttaaaaa aaaagagaga gagatgtaat ttaaaaagtt
1981 tattataaat taaattcagc aaaaaaagat ttgctacaaa gtatagagaa gtataaaata
2041 aaagttattg tttgaagaaa aaaaaaaaaa aa
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