LOCUS BC041888 2620 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens RAB GTPase activating protein 1-like, mRNA (cDNA clone
MGC:44489 IMAGE:5298493), complete cds.
ACCESSION BC041888
VERSION BC041888.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2620)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2620)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 77 Row: b Column: 23.
FEATURES Location/Qualifiers
source 1..2620
/db_xref="H-InvDB:HIT000052632"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44489 IMAGE:5298493"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2620
/gene="RABGAP1L"
/gene_synonym="EVI5"
/gene_synonym="HHL"
/gene_synonym="TBC1D18"
/db_xref="GeneID:9910"
/db_xref="MIM:609238"
CDS 282..2099
/gene="RABGAP1L"
/gene_synonym="EVI5"
/gene_synonym="HHL"
/gene_synonym="TBC1D18"
/codon_start=1
/product="RABGAP1L protein"
/protein_id="AAH41888.1"
/db_xref="GeneID:9910"
/db_xref="MIM:609238"
/translation="MEVRASLQKIVSNGDEQLEKAMEEILRDSEKRPSSLLVDCQSSS
EISDHSFGDIPASQTNKPSLQLILDPSNTEISTPRPSSPGGLPEEDSVLFNKLTYLGC
MKVSSPRNEVEALRAMATMKSSSQYPFPVTLYVPNVPEGSVRIIDQSSNVEIASFPIY
KVLFCARGHDGTTESNCFAFTESSHGSEEFQIHVFSCEIKEAVSRILYSFCTAFKRSS
RQVSDVKDSVIPTPDSDVFTFSVSLEVKEDDGKGNFSPVPKDRDKFYFKLKQGIEKKV
VITVQQLSNKELAIERCFGMLLSPGRNVKNSDMHLLDMESMGKSYDGRAYVITGMWNP
NAPVFLALNEETPKDKQVYMTVAVDMVVTEVVEPVRFLLETVVRVYPANERFWYFSRK
TFTETFFMRLKQSEGKGHTNAGDAIYEVVSLQRESDKEEPVTPTSGGGPMSPQDDEAE
EESDNELSSGTGDVSKDCPEKILYSWGELLGKWHSNLGARPKGLSTLVKSGVPEALRA
EVWQLLAGCHDNQAMLDRYRILITKQQMKFSLTPRQTIHLVKYEGSMKVSMTPCNQLQ
FDIRLDVLITYTFCFSSFPEPELYKYVLKHQLIKRLNAC"
BASE COUNT 763 a 520 c 601 g 736 t
ORIGIN
1 ggcctggacg agcgcgcttc cgacccgccg ccaccgcctc ctcccctcct tctcggcccg
61 ccccctccct cgcctcttcc tgccaggcgg cccttctccc ctcccctctc agttccctcc
121 gccctcctcg ggctccagcg gtggcggagc gaacgggacc ggcccggctt cagagcgcga
181 ggtggagggt ggaacgcggg cgcctgaagg agttgttgtc tcggcagcgc ccgcggagac
241 gtgaagaggt ggttgtggga agagaagttt gcagaactga aatggaggtc agagcttcat
301 tacagaagat agtttctaat ggtgatgaac aattggaaaa agccatggaa gagattttga
361 gagattccga gaaaaggcca agcagtcttc ttgttgattg tcagagttcc agtgagattt
421 cagaccattc gtttggagat attccagcca gccaaacaaa taagccatct cttcagttaa
481 ttttggatcc gtctaacaca gaaatttcta cacccagacc atcttctcca ggtggactac
541 ctgaagaaga tagtgtttta tttaataaac tgacctactt aggatgtatg aaggtttctt
601 ccccacgtaa tgaagtagag gctttacggg caatggcaac catgaaatct tccagtcaat
661 acccctttcc tgttaccctg tatgtaccaa atgttccaga aggttctgtg agaattatag
721 accaatccag caatgtggag atagcatctt ttccaatcta taaggtgtta ttctgtgcac
781 gtggacatga cggaacaaca gagagcaatt gctttgcatt tacagagagt tcccatggtt
841 cggaagaatt tcagatacat gttttctcct gtgaaattaa agaggcagta agcagaattt
901 tgtacagttt ctgtacagca ttcaaacgtt cttccagaca agtgtctgat gttaaagact
961 cagttattcc tacccccgac agtgatgtgt ttaccttcag tgtctccttg gaggtaaaag
1021 aagacgatgg aaaaggaaac tttagccctg tgcctaagga tagagataaa ttttatttca
1081 aattaaagca aggaatagag aagaaggttg tgattacagt gcagcaactt tctaacaaag
1141 aattagctat tgaaagatgt tttggaatgt tattaagccc aggtcgaaac gtgaagaaca
1201 gtgacatgca tttactggat atggaatcca tgggaaagag ctatgatggg agagcttatg
1261 tcatcactgg catgtggaac cccaatgcac cagtatttct ggcacttaac gaggaaaccc
1321 caaaagataa gcaagtatac atgactgtgg cagtggatat ggtagtcaca gaggtggtgg
1381 agcctgttcg ctttctcctg gagacagtag tccgtgtgta ccctgcaaat gagcgatttt
1441 ggtatttcag cagaaagact ttcacagaga ccttcttcat gagattgaaa cagtctgagg
1501 gaaaaggcca taccaatgct ggagatgcaa tatatgaggt ggtgagtcta cagcgagagt
1561 ctgacaagga ggaaccagtc actcctacta gtggaggggg tccaatgtca ccccaggatg
1621 atgaagcaga agaggagagt gataatgaac tctcaagtgg aacaggtgat gtgtctaagg
1681 attgtcctga gaagatcctg tattcttggg gagagttgct aggaaaatgg cacagtaacc
1741 ttggtgcacg accgaaaggg ctgtctactc tggtgaagag tggtgtccct gaagcattga
1801 gggcagaggt atggcagtta ttggcaggct gccatgacaa ccaggcaatg ctggatagat
1861 accgaattct tatcacaaag caacagatga aatttagtct tacaccgaga cagactattc
1921 acctagttaa atatgaaggg tctatgaagg tctccatgac accctgtaac cagctgcaat
1981 ttgacattag acttgatgtt ctgattactt atactttttg ttttagttcc tttcctgagc
2041 ctgaattgta caaatatgtc ctaaaacacc aacttattaa gaggcttaat gcctgttaaa
2101 tgcgtcagtg ctcttggcag cttagcatga gtgctttctt tgcatgggag gttgcagttt
2161 agaagcaact ttatggatca tttcccaggt tgatgttaca tatgttcatt ttacaacctg
2221 tgtgcataat ctctcagggt gaaggtaatt aagagaaagc ataatctaca gaattgaagc
2281 caagtaatct aagattctgt ttttaaactc tttgctatat aacattagtt aagttgttta
2341 ccctcttaat ttatccattt gtaaaatgat agtttttgtt tttaaagtgc tctattaccc
2401 ttactttaaa agtcctgtct accatatatt taaaactata agtggaaata atgaagaaac
2461 tctgaacttg cttttgctta tatatggata tatcatatta tatgcctaag attggagata
2521 aattttataa cctgattttc tcatggcagt gtacaaatga aattattctg taagtttttc
2581 aaaacagtaa aatcactatt tttcaaaaaa aaaaaaaaaa
//