LOCUS BC041874 2701 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens microtubule-associated protein 1 light chain 3 beta, mRNA (cDNA clone MGC:43743 IMAGE:5271912), complete cds. ACCESSION BC041874 VERSION BC041874.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2701) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2701) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 74 Row: p Column: 15. FEATURES Location/Qualifiers source 1..2701 /db_xref="H-InvDB:HIT000096916" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:43743 IMAGE:5271912" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2701 /gene="MAP1LC3B" /gene_synonym="MAP1A/1BLC3" /db_xref="GeneID:81631" /db_xref="HGNC:HGNC:13352" CDS 629..1006 /gene="MAP1LC3B" /gene_synonym="MAP1A/1BLC3" /codon_start=1 /product="microtubule-associated protein 1 light chain 3 beta" /protein_id="AAH41874.1" /db_xref="GeneID:81631" /db_xref="HGNC:HGNC:13352" /translation="MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQL PVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESE KDEDGFLYMVYASQETFGMKLSV" BASE COUNT 719 a 688 c 621 g 673 t ORIGIN 1 acgggcgagc ggcgaccctg cctcccggag acggcgcggc ctgccctgcg cgcctcagcc 61 ccgggtgccg gcgtctcggg cagcaccacc aagtctctct ggaggggaaa ggatggtcgg 121 atttgcccca tgtccctttc tctgacccct ccctcaagag tgccccggga caccccgcct 181 gtggctcagc ctcccccgcc ccgcgctgcc atctcctcag ggccgggcag caggctcccg 241 agcgcccaca gacccggggt gcggcccagc ccacaaccgt cacctcaggg gcctcaggcg 301 cccagcggtg ctgggcgggg ctggggcacg accgggagca tgcgcagagc gcgcgtttcg 361 cccatcgcgc acgcgcacac acctgctccg cccccacgct gcgtgccgct gctgggttcc 421 gccacgcccg tcatggcggc ggccccggcc ggctctggcc ccgcccctcg gtgacgcgtc 481 gcgagtcacc tgaccaggct gcgggctgag gagatacaag ggaagtggct atcgccagag 541 tcggattcgc cgccgcagca gccgccgccc ccgggagccg ccgggaccct cgcgtcgtcg 601 ccgccgccgc cgcccagatc cccgcaccat gccgtcggag aagaccttca agcagcgccg 661 caccttcgaa caaagagtag aagatgtccg acttattcga gagcagcatc caaccaaaat 721 cccggtgata atagaacgat acaagggtga gaagcagctt cctgttctgg ataaaacaaa 781 gttccttgta cctgaccatg tcaacatgag tgagctcatc aagataatta gaaggcgctt 841 acagctcaat gctaatcagg ccttcttcct gttggtgaac ggacacagca tggtcagcgt 901 ctccacacca atctcagagg tgtatgagag tgagaaagat gaagatggat tcctgtacat 961 ggtctatgcc tcccaggaga cgttcgggat gaaattgtca gtgtaaaacc agaaaaaatg 1021 catctcttct agaattgttt aaacccttac caaggaaaaa aaaggggtgt taccaactga 1081 gatcgatcag ttcatccaat cacagatcat gaaacagtag tgttcccacc taggagtgtt 1141 aggaagttgt gtttgtgttt caagcagaaa aactgagctc caagtgagca cattcagctt 1201 tggaaactat attatttaat gtaggctagc ttgttttcaa attttaaaag tttaaaaata 1261 aaatactttg cattctaagt tgccaataaa atagaccttc aagttatttt aatgctcttt 1321 tctcactaat aggaacttgt aattccagca gtaatttaaa ggctttcaga gagaccctga 1381 gtcttctctt caggttcaca gaacccgccg cctttttggg tagaagtttt ctactcagct 1441 agagagatct ccctaagagg atctttaggc ctgagttgtg aagcgcaacc cccgcaaaac 1501 gcatttgcca tcacagttgg cacaaacgca gggtaaacgg gctgtgtgag aaaacggccc 1561 tgactgtaaa ctgctgaagg tccctgactc ctaagagaac cacacccaaa gtcctcactc 1621 ttgcaggggt agacatttct ggtttggttt gttctctaga tagttacaca cataaagaca 1681 ccactcaaaa ggaaacttga ataatttata attttgatcg agtttcttaa aagaccctgg 1741 agaaagagtg gcatttcttc tgtttcaggt tttgtctgag ttcaaactag tgcctgtgtt 1801 gttacggaaa gcagcagtgt accagtgtca ctctggagta cagcgggaga aacacaaaat 1861 agtataactg aaaacattaa cattcagaca cactcccttc tgccttccgg cttaaagctg 1921 tggatgatcc acgtttttgt ttttttaatg ttaaatgtgt aactcagtat tactgaaaag 1981 gtacccacat tttgaatagt agttatcact cttaggtcag acagccatca gaattctccc 2041 acaccaagtg catgtcagtt gtggagaaaa catagcaaaa agagccgtac gctctttaca 2101 gatactaatg tcaagagtta aacctcctca ggttcaacct gtgataaaag actagtgctt 2161 cccagtactt gcatggggtt cactatttat agttttcttg ggagtatcac aggaaaatca 2221 caattacacc actttagacc ctatgtgtag caggtcacaa cttacccttg tgtgtttaga 2281 tgtgtatgaa atacctgtat acgttagtga aagctgttta ctgtaacggg gaaaaccaga 2341 ttctttgcat ctgggccctc tactgattgt taaaggagtt cctgtcacct gctcccccca 2401 cccccgcatg cgtctgtcca cttggctaac ttttaatatg tgtattttta cattatgtat 2461 attcttaact ggactgtctc gtttagactg tatacatcat atctgacatt attgtaacta 2521 ccgtgtgatc agtaagattc ctgtaagaaa tactgctttt taagaaaaaa aataacatgc 2581 tgaggggtga cctatatccc atgtgagtgg tcactttatt tataggatct ttaaaacatt 2641 tttaatgaac taagttgaat aaaggcacaa ttaaaaactg tcatcaaaaa aaaaaaaaaa 2701 a //