LOCUS BC041806 2926 bp mRNA linear HUM 23-OCT-2007
DEFINITION Homo sapiens progesterone immunomodulatory binding factor 1, mRNA
(cDNA clone MGC:41850 IMAGE:5269898), complete cds.
ACCESSION BC041806
VERSION BC041806.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2926)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2926)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: j Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55769582.
FEATURES Location/Qualifiers
source 1..2926
/db_xref="H-InvDB:HIT000096861"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41850 IMAGE:5269898"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2926
/gene="PIBF1"
/gene_synonym="RP11-505F3.1"
/db_xref="GeneID:10464"
/db_xref="HGNC:HGNC:23352"
/db_xref="MIM:607532"
CDS 258..2354
/gene="PIBF1"
/gene_synonym="RP11-505F3.1"
/codon_start=1
/product="PIBF1 protein"
/protein_id="AAH41806.1"
/db_xref="GeneID:10464"
/db_xref="HGNC:HGNC:23352"
/db_xref="MIM:607532"
/translation="MSRKISKESKKVNISSSLESEDISLETTVPTDDISSSEEREGKV
RITRQLIERKELLHNIQLLKIELSQKTMMIDNLKVDYLTKIEELEEKLNDALHQKQLL
TLRLDNQLAFQQKDASKYQELMKQEMETILLRQKQLEETNLQLREKAGDVRRNLRDFE
LTEEQYVKLKAFPEDQLSIPEYVSVRFYELVNPLRKEICELQVKKNILAEELSTNKNQ
LKQLTETYEEDRKNYSEVQIRCQRLALELADTKQLIQQGDYRQENYDKVKSERDALEQ
EVIELRRKHEILEASHMIQTKERSELSKEVVTLEQTVTLLQKDKEYLNRQNMELSVRC
AHEEDRLERLQAQLEESKKAREEMYEKYVASRDHYKTEYENKLHDELEQIRLKTNQEI
DQLRNASREMYERENRNLREARDNAVAEKERAVMAEKDALEKHDQLLDRYRELQLSTE
SKVTEFLHQSKLKSFESERVQLLQEETARNLTQCQLECEKYQEKLEVLTKEFYSLQAS
SEKRITELQAQNSEHQARLDIYEKLEKELDEIIMQTAEIENEDEAERVLFSYGYGANV
PTTAKRRLKQSVHLARRVLQLEKQNSLILKDLEHRKDQVTQLSQELDRANSLLNQTQQ
PYRYLVESVRQRDSKIDSLTESIAQLEKDVSNLNKEKSALLQTKNQMALDLEQLLNHR
EVFFLFCHNCNHFRLF"
BASE COUNT 1071 a 489 c 558 g 808 t
ORIGIN
1 acttacggcg gcttgtggga gtgctggttc tgtcctcctt gcgggtgcgg agatggttgt
61 cttggttacg ggtcctaacg gtcccctgcc ttgaaatccc ttgttgaggg cctgcaacct
121 tgtgcttccg actggagacg cctttggtcc ctcggtgtct gcactggctg ctggtcaagg
181 cttcagtgtg gagtaattga cactttcgag aatattaaaa tcaaattaga gaagaaaact
241 gatccataat aataaaaatg tctcgaaaaa tttcaaagga gtcaaaaaaa gtgaacatct
301 ctagttctct ggaatctgaa gatattagtt tagaaacaac agttcctacg gatgatattt
361 cctcatcaga agagcgagag ggcaaagtca gaatcaccag gcagctaatt gaacgaaaag
421 aactacttca taatattcag ttactaaaaa ttgagctatc ccagaaaact atgatgatcg
481 acaatttgaa agtggattat cttacaaaga ttgaagaatt ggaggagaaa cttaatgatg
541 cacttcacca gaagcagcta ctaacattga gattagacaa ccaattggct tttcaacaga
601 aagatgccag caaatatcaa gaattaatga aacaagaaat ggaaaccatt ttgttgagac
661 agaaacaact agaagagaca aatcttcagc taagagaaaa agctggagat gttcgtcgaa
721 acctgcgtga ctttgagttg acagaagagc aatatgttaa attaaaagct tttcctgaag
781 atcagctttc tattcctgaa tatgtatctg ttcgcttcta tgagctagtg aatccattaa
841 gaaaggaaat ctgtgaacta caagtgaaaa agaatatcct agcagaagaa ttaagtacaa
901 acaaaaacca actgaagcag ctgacagaga catatgagga agatcgaaaa aactactctg
961 aagttcaaat tagatgtcaa cgtttggcct tagaattagc agacacaaaa cagttaattc
1021 agcaaggtga ctaccgtcaa gagaactatg ataaagtcaa gagtgaacgt gatgcacttg
1081 aacaggaagt aattgagctt aggagaaaac atgaaatact tgaagcctct cacatgattc
1141 aaacaaaaga acgaagtgaa ttatcaaaag aggtagtcac cttagagcaa actgttactt
1201 tactgcaaaa ggataaagaa tatcttaatc gccaaaacat ggagcttagt gttcgctgtg
1261 ctcatgaaga ggatcgcctt gaaagacttc aagctcaact ggaagaaagc aaaaaggcta
1321 gagaagagat gtatgaaaaa tatgtagcat ccagagacca ttataaaaca gaatatgaaa
1381 ataaactaca tgatgaacta gaacaaatca gattgaaaac caaccaagaa attgatcaac
1441 ttcgaaatgc ctctagggaa atgtatgaac gagaaaacag aaatctccga gaagcaaggg
1501 ataatgctgt ggctgaaaag gaacgagcag tgatggctga aaaggatgct ttagaaaaac
1561 acgatcagct cttagacagg tacagagaac tacaacttag tacagaaagc aaagtaacag
1621 aatttctcca tcaaagtaaa ttaaaatctt ttgaaagtga gcgtgttcaa cttctgcaag
1681 aggaaacagc aagaaatctc acacagtgtc aattggaatg tgaaaaatat caggaaaaat
1741 tggaggtttt aaccaaagaa ttttatagtc tccaagcctc ttctgaaaaa cgcattactg
1801 aacttcaagc acagaactca gagcatcaag caaggctaga catttatgag aaactggaaa
1861 aagagcttga tgaaataata atgcaaactg cagaaattga aaatgaagat gaggctgaaa
1921 gggttctttt ttcctacggc tatggtgcta atgttcccac aacagccaaa agacgactaa
1981 agcaaagtgt tcacttggca agaagagtgc ttcaattaga aaaacaaaac tcgctgattt
2041 taaaagatct ggaacatcga aaggaccaag taacacagct ttcacaagag cttgacagag
2101 ccaattcgct attaaaccag actcaacagc cttacaggta tctcgttgaa tcagtgcgtc
2161 agagagattc taagattgat tcactgacgg aatctattgc acaacttgag aaagatgtca
2221 gcaacttaaa taaagaaaag tcagctttac tacagacgaa gaatcaaatg gcattagatt
2281 tagaacaact tctaaatcat cgtgaggtat ttttcctatt ttgtcataat tgtaatcatt
2341 ttaggctttt ttaaaaactg ctatcaggtt aaaattattg gatcacagtt gtgcatgttc
2401 attaatgact tctcttattt atgtctcact gtaattttgt ccttttttat tcaacttttg
2461 atatacttct tagagttaat tcttattcct agaataaccc cttcttgttg tgttgatatc
2521 tgtcactgaa tttccccata ttatttaata ataatctgtt ttatcttatt ctgcaactag
2581 acagttaatt tccttagtgt gcctctcgtc ttctttatca atgtatgccc agtgcctgta
2641 gtgtagataa tttgtgttga gctttaaagt tcataaaatt attttctttt cttcatttgt
2701 tccctaccaa aattctttta gagtaaatat aattcctatt ttatagatgg agaaatgagt
2761 tttaagtggc ttgcccatgg cagttagtaa ctaagagata agttctgttt tgttttgttt
2821 ttttccttta aggtttattg agttataatc tacaaagaat aaaattaacc ttttttagca
2881 gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa agaaaaaaaa aaaaaa
//