LOCUS BC041771 2516 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens cyclin-dependent kinase 5, regulatory subunit 2 (p39),
mRNA (cDNA clone MGC:26409 IMAGE:4818320), complete cds.
ACCESSION BC041771
VERSION BC041771.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2516)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2516)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: o Column: 7.
FEATURES Location/Qualifiers
source 1..2516
/db_xref="H-InvDB:HIT000096853"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26409 IMAGE:4818320"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2516
/gene="CDK5R2"
/gene_synonym="NCK5AI"
/gene_synonym="P39"
/gene_synonym="p39nck5ai"
/db_xref="GeneID:8941"
/db_xref="HGNC:HGNC:1776"
/db_xref="MIM:603764"
CDS 167..1270
/gene="CDK5R2"
/gene_synonym="NCK5AI"
/gene_synonym="P39"
/gene_synonym="p39nck5ai"
/codon_start=1
/product="cyclin-dependent kinase 5, regulatory subunit 2
(p39)"
/protein_id="AAH41771.1"
/db_xref="GeneID:8941"
/db_xref="HGNC:HGNC:1776"
/db_xref="MIM:603764"
/translation="MGTVLSLSPASSAKGRRPGGLPEEKKKAPPAGDEALGGYGAPPV
GKGGKGESRLKRPSVLISALTWRRLVAASAKKKKGSKKVTPKPASTGPDPLVQQRNRE
NLLRKGRDPPDGGGTAKPLAVPVPTVPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPP
PAPQVAPPVPGGSPRRVIVQASTGELLRCLGDFVCRRCYRLKELSPGELVGWFRGVDR
SLLLQGWQDQAFITPANLVFVYLLCRESLRGDELASAAELQAAFLTCLYLAYSYMGNE
ISYPLKPFLVEPDKERFWQRCLRLIQRLSPQMLRLNADPHFFTQVFQDLKNEGEAAAS
GGGPPSGGAPAASSAARDSCAAGTKHWTMNLDR"
BASE COUNT 383 a 889 c 766 g 478 t
ORIGIN
1 agctcaggat tagagcagcg gagccgccta gcagccacct tcccccgcca gtccgcgcgc
61 ccgggccggg gctaggcccc ccaccgccgg gtcccccggg gctgcagtag cagcggcgcc
121 gcccgcggct cccgctgggg cctgggcgcc ggccccgctc tgcaggatgg gcacagtgct
181 gtctctttcg cctgcctcct cggccaaggg ccggaggccc ggcgggctgc ccgaggagaa
241 gaagaaggcg ccgcccgcgg gggacgaggc gctggggggc tacggggcgc cgccagtggg
301 caagggcggc aaaggcgaga gccgactcaa gcggccgtcc gtgctcatct cggcgctcac
361 ctggaggcgc ctggtggccg cgtccgccaa gaagaagaaa ggcagcaaga aggtgacacc
421 caagccggca tccacgggcc ccgaccccct ggtccagcaa cgcaaccgcg agaaccttct
481 ccgcaagggc cgggatcccc ccgacggcgg cggcaccgcc aagcccctgg cggtgccagt
541 gcccaccgtg cccgcggctg ccgccacctg cgagccaccg tcggggggca gcgcggccgc
601 tcagccgccg ggctcgggcg ggggaaagcc tccgccgccg cctcccccag ccccgcaggt
661 ggcgccgccg gtgcctggcg gctcgccgcg gcgggtcatc gtgcaggcgt ccaccggcga
721 gctgctgcgc tgtctgggcg acttcgtgtg ccgacgctgc tatcgcctca aggagctgag
781 cccgggcgag ctggtgggct ggttccgcgg tgtggaccgc tcgctgctgc tgcagggctg
841 gcaagaccag gccttcatta cgcctgcaaa cctggtgttc gtgtacctgc tgtgccgcga
901 gtcgctgcgt ggggacgagc tggcgtcggc cgccgagctg caggccgcct tcctcacctg
961 cctctacctc gcctactcct acatgggcaa cgagatctcc tacccactca agcccttcct
1021 cgtggagccc gacaaggagc gcttctggca gcgctgcctg cgcctcatcc agcggctcag
1081 cccgcagatg ctgcggctca acgccgaccc ccacttcttc acgcaggtct ttcaagacct
1141 caagaacgag ggcgaggccg ccgccagcgg cgggggccca ccgagcgggg gcgcgcccgc
1201 cgcctcctcg gccgccaggg acagctgcgc ggccggaacc aagcactgga ctatgaacct
1261 ggaccgctag ggatacccag gggccgcgcc catcccccgc cccagcccct gacacacact
1321 cggacccccc gggaccacaa agccaccgcc gctgttaccg ccgctcagcg ccccggctgg
1381 gcggaggagg agacgcccat gcccctcagg ggaaagtgga gaccgggaca ccagaggccg
1441 cggtgtttgg atttgctggg cgtggagtgg ggacggaaga tgagcgcggg aaaggcactc
1501 caacctcact cttcccgtct gtctgcgccc ccatttctcc atttctgccg gggtctcccc
1561 cttcccttca gcccattccc cctcggtttt atccatttcc ttgcctcctt tttgtgtctt
1621 catttttcct cctgtctgca ttcctctctc tctctctccc tctatctcct gttcctctct
1681 ttcttcctcc ctctccctgc ctttccattt tccgttcctt gggtttgtgt gtctgcatct
1741 ccatcttacc ccttgcctga ctgtaccccg tagacccctg tttctcctcc tgcacctgtg
1801 tccccatctg cccttcttgt tgctcctgtc atttgtcacc atcttccctc ctgtctgcct
1861 tcttcctcca cttgtgtcag cttgcatttt tttattcctg actgagtcac cacacccctc
1921 tcccctgatc aaagggaata ttagttttta atttggatcg actgaggtgc caggagaaac
1981 tgcagtccca ggtatccaga cagccaccag gatggtccct cgccccaccc ccaccgcctc
2041 tccccacctt ttccaacgtg ttgcatgctg ggagctgggg ggtgtggggg aaggggctgc
2101 cggcttcttt caggaggctg aggtttggag gcaaaatcaa cctgggagac caccccggcc
2161 gcggcgcctc agtggacagg tgggaggaaa agaaaacttc ttaccttgga ggagggacat
2221 cccgcttcct tatccttagc ttttttgttg ctcctcccca ctgccccttt taatttattt
2281 ggttgtttgc ggagggaggg gggagggggg taggctgggc cgggaactgt ccgaggtgct
2341 gagctggggc gggaccggaa tcctcccggt agggtaccag ggactgagtt gggcctgggg
2401 ccgtgtccaa ggtgccaatg atgcgggccg acagagcggg ccgcactgtc tgtctgtccg
2461 tctgtcccgg aaagaactat aaagcgctgg aagcgcctgc aaaaaaaaaa aaaaaa
//