LOCUS BC041709 3241 bp mRNA linear HUM 06-DEC-2007 DEFINITION Homo sapiens chromosome 5 open reading frame 41, mRNA (cDNA clone MGC:49003 IMAGE:5761775), complete cds. ACCESSION BC041709 VERSION BC041709.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3241) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3241) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: m Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23957697. FEATURES Location/Qualifiers source 1..3241 /db_xref="H-InvDB:HIT000052599" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:49003 IMAGE:5761775" /tissue_type="Lung, Spleen, fetal, pooled" /clone_lib="NIH_MGC_122" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3241 /gene="C5orf41" /db_xref="GeneID:153222" /db_xref="HGNC:HGNC:24050" CDS 305..2224 /gene="C5orf41" /codon_start=1 /product="chromosome 5 open reading frame 41" /protein_id="AAH41709.1" /db_xref="GeneID:153222" /db_xref="HGNC:HGNC:24050" /translation="MPQPSVSGMDPPFGDAFRSHTFSEQTLMSTDLLANSSDPDFMYE LDREMNYQQNPRDNFLSLEDCKDIENLESFTDVLDNEGALTSNWEQWDTYCEDLTKYT KLTSCDIWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQSVSDSLYYPDSL FSVKQNPLPSSFPGKKITSRAAAPVCSSKTLQAEVPLSDCVQKASKPTSSTQIMVKTN MYHNEKVNFHVECKDYVKKAKVKINPVQQSRPLLSQIHTDAAKENTCYCGAVAKRQEK KGMEPLQGHATPALPFKETQELLLSPLPQEGPGSLAAGESSSLSASTSVSDSSQKKEE HNYSLFVSDNLGEQPTKCSPEEDEEDEEDVDDEDHDEGFGSEHELSENEEEEEEEEDY EDDKDDDISDTFSEPGYENDSVEDLKEVTSISSRKRGKRRYFWEYSEQLTPSQQERML RPSEWNRDTLPSNMYQKNGLHHGKYAVKKSRRADVEDLTPNPKKLLQIGNELRKLNKV ISDLTPVSELPLTARPRSRKEKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFV INSIKQEIVNRVQNPRDERGPNMGQKLEILIKDTLGLPVAGQTSEFVNQVLEKTAEGN PTGGLVGLRIPTSKV" BASE COUNT 1126 a 597 c 688 g 830 t ORIGIN 1 cgggaacccg tcaggaagga cataaacaaa acaaacccga ggcagcatgg agaggggccg 61 tggcccctgc agcggaaccg gacccagtcc ctgagccgcc cctacaccca cagacagcat 121 cgcacagaat tattttaaaa aaaagcagtg atccaagcaa ttgaattgga agcactctgg 181 ggaaacctgc tgtttattgt ggaaatcatc ttcgatcttg gaattgaaag taaagctgga 241 aaggaattta caaacaagaa aaaaaagaag tttggaatcg gattcacagg atctgggctt 301 ggaaatgcct cagcctagtg taagcggaat ggatccgcct ttcggggatg cctttcgaag 361 ccacaccttt tcggaacaaa ctctgatgag cacagatctc ttagcaaaca gttcggatcc 421 agatttcatg tatgaactgg atagagagat gaactaccaa cagaatccta gagacaactt 481 tctttctttg gaggactgca aagacattga aaatctggag tctttcacag atgtcctgga 541 taatgagggt gctttaacct caaactggga acagtgggat acatactgtg aagacctaac 601 gaaatatacc aaactaacca gctgtgacat ctggggaaca aaagaagtgg attacttggg 661 tcttgatgac ttttctagtc cttaccaaga tgaagaggtt ataagtaaaa ctccaacttt 721 agctcaactt aatagtgagg actcacagtc tgtttctgat tccctttatt accccgattc 781 acttttcagt gtcaaacaaa atcccttacc ctcttcattc cctggtaaaa agatcacaag 841 cagagcagct gctcctgtgt gttcttctaa gactctgcag gctgaggtcc ctttgtcaga 901 ctgtgtccaa aaagcaagta aacccacttc aagcacacaa atcatggtga agaccaacat 961 gtatcataat gaaaaggtga actttcatgt tgaatgtaaa gactatgtaa aaaaggcaaa 1021 ggtaaagatc aacccagtgc aacagagccg gcccttgttg agccagattc acacagatgc 1081 agcaaaggag aacacctgct actgtggtgc agtggcaaag agacaagaga aaaaagggat 1141 ggagcctctt caaggtcatg ccactcccgc tttgcctttt aaagaaaccc aggaactatt 1201 actaagtccc ctgccccagg aaggtcctgg gtcacttgca gcaggagaga gcagcagtct 1261 ttctgccagt acatcagtct cagattcatc ccagaaaaaa gaagagcaca attattctct 1321 ttttgtctcc gacaacttgg gtgaacagcc aactaaatgc agtcctgaag aagatgagga 1381 ggacgaggag gatgttgatg atgaggacca tgatgaagga ttcggcagtg agcatgaact 1441 gtctgaaaat gaggaggagg aagaagagga agaggattat gaagatgaca aggatgatga 1501 tattagtgat actttctctg aaccaggcta tgaaaatgat tctgtagaag acctgaagga 1561 ggtgacttca atatcttcac ggaagagagg taaaagaaga tacttctggg agtatagtga 1621 acaacttaca ccatcacagc aagagaggat gctgagacca tctgagtgga accgagatac 1681 tttgccaagt aatatgtatc agaaaaatgg cttacatcat ggaaaatatg cagtaaagaa 1741 gtcacggaga gctgatgtag aagacctgac tccaaatcct aaaaaactcc tccagatagg 1801 caatgaactt cggaaactga ataaggtgat tagtgacctg actccagtca gtgagcttcc 1861 cttaacagcc cgaccaaggt caaggaagga aaaaaataag ctggcttcca gagcttgtcg 1921 gttaaagaag aaagcccagt atgaagctaa taaagtgaaa ttatggggcc tcaacacaga 1981 atatgataat ttattgtttg taatcaactc catcaagcaa gagattgtaa accgggtaca 2041 gaatccaaga gatgagagag gacccaacat ggggcagaag cttgaaatcc tcattaaaga 2101 tactctcggt ctaccagttg ctgggcaaac ctcagaattt gttaaccaag tgttagagaa 2161 gactgcagaa gggaatccca ctggaggcct tgtaggatta aggataccaa catcaaaggt 2221 gtaatcagcc tcattggacc actggtcaga aatgtctgcg ttttgtcacg ttatccattg 2281 taaattttca ttctgttttg catgtcagtt agcattatgt aaacatttac aattaggtta 2341 cattgtttta agaactaagt agcataagtg aagcatgatc caaaatactt gattattgca 2401 ttttcagagc ataaaccatg attaaaactg ctactggcat cagaattgaa aatcatatgt 2461 ttaagtaaat gttaggtaca gattacaaaa atctgttaaa gcaaaacatt ttggaggagt 2521 gaaatagtaa aatgccaagt attgtggcag atttatgctc tgaaccacac aaaaaaattg 2581 aggaagcatt tttttaaaca gtcggtttaa attgttttta gaattattgc ttttgttcta 2641 attttccaca accattaatc tcacttgtat atggcacacc cagcacttgt gcctgtgggc 2701 catattagat gttcattgtc agagctcaag atgatatata taaatatata tatatatata 2761 tatatataca cacacacaca caaatgtctg tgcaagtaag aaaaaaaaag catattcttt 2821 gtgccttgta ttttggggaa actctaaaac tggtaatatt ttgtatgatg aaaaccctaa 2881 tgagaaaaaa caagatatat agatggaaaa attatggggt ttaaatgttt ttttgttcca 2941 actctttttc agattttttg aatgtatata gggctatgtt gaaatgtaga tatatgccac 3001 agagtctgtg tattgtataa aaaacaaaac aaaaaacaac aaaaaaaaga tggctctaga 3061 aaactcatat ttcggtactt gaccggaaga agacaaatac ttgcacatta ttgcgattgt 3121 tttatttttt gtaccaaaga caaatgcaac tgatatggca aactgccagt ctaagtaaag 3181 ttttgcacag cttacatgat actgtatgaa tgtatgaaaa aaaaaaaaaa aaaaaaaaaa 3241 a //