LOCUS BC041663 3443 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens tumor necrosis factor (ligand) superfamily, member 4, mRNA (cDNA clone MGC:47852 IMAGE:4510740), complete cds. ACCESSION BC041663 VERSION BC041663.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3443) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3443) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: b Column: 20. FEATURES Location/Qualifiers source 1..3443 /db_xref="H-InvDB:HIT000052586" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47852 IMAGE:4510740" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3443 /gene="TNFSF4" /gene_synonym="CD134L" /gene_synonym="CD252" /gene_synonym="GP34" /gene_synonym="OX-40L" /gene_synonym="OX4OL" /db_xref="GeneID:7292" /db_xref="HGNC:HGNC:11934" /db_xref="MIM:603594" CDS 246..647 /gene="TNFSF4" /gene_synonym="CD134L" /gene_synonym="CD252" /gene_synonym="GP34" /gene_synonym="OX-40L" /gene_synonym="OX4OL" /codon_start=1 /product="TNFSF4 protein" /protein_id="AAH41663.1" /db_xref="GeneID:7292" /db_xref="HGNC:HGNC:11934" /db_xref="MIM:603594" /translation="MVSHRYPRIQSIKVQFTEYKKEKGFILTSQKEDEIMKVQNNSVI INCDGFYLISLKGYFSQEVNISLHYQKDEEPLFQLKKVRSVNSLMVASLTYKDKVYLN VTTDNTSLDDFHVNGGELILIHQNPGEFCVL" BASE COUNT 1017 a 661 c 700 g 1065 t ORIGIN 1 aaaacacagg acacatggct ccattcaagg ctaactgatt gcacaacggc tctgagcagg 61 agagagcaaa aggtgaacca cagttgtaca gcttgctggt ggttggggtc acattggact 121 atcaatatcc aggagatgtt gagaaaaaga ggggatcctt tccaacaagt catccagcaa 181 ctctgggaca gaaggaaagc tgtgggaaga aaagcagggt gctggtttct aggacactaa 241 acctcatggt atcacatcgg tatcctcgaa ttcaaagtat caaagtacaa tttaccgaat 301 ataagaagga gaaaggtttc atcctcactt cccaaaagga ggatgaaatc atgaaggtgc 361 agaacaactc agtcatcatc aactgtgatg ggttttatct catctccctg aagggctact 421 tctcccagga agtcaacatt agccttcatt accagaagga tgaggagccc ctcttccaac 481 tgaagaaggt caggtctgtc aactccttga tggtggcctc tctgacttac aaagacaaag 541 tctacttgaa tgtgaccact gacaatacct ccctggatga cttccatgtg aatggcggag 601 aactgattct tatccatcaa aatcctggtg aattctgtgt cctttgaggg gctgatggca 661 atatctaaaa ccaggcacca gcatgaacac caagctgggg gtggacaggg catggattct 721 tcattgcaag tgaaggagcc tcccagctca gccacgtggg atgtgacaag aagcagatcc 781 tggccctccc gcccccaccc ctcagggata tttaaaactt attttatata ccagttaatc 841 ttatttatcc ttatattttc taaattgcct agccgtcaca ccccaagatt gccttgagcc 901 tactaggcac ctttgtgaga aagaaaaaat agatgcctct tcttcaagat gcattgtttc 961 tattggtcag gcaattgtca taataaactt atgtcattga aaacggtacc tgactaccat 1021 ttgctggaaa tttgacatgt gtgtggcatt atcaaaatga agaggagcaa ggagtgaagg 1081 agtggggtta tgaatctgcc aaaggtggta tgaaccaacc cctggaagcc aaagcggcct 1141 ctccaaggtt aaattgattg cagtttgcat attgcctaaa tttaaacttt ctcatttggt 1201 gggggttcaa aagaagaatc agcttgtgaa aaatcaggac ttgaagagag ccgtctaaga 1261 aataccacgt gctttttttc tttaccattt tgctttccca gcctccaaac atagttaata 1321 gaaatttccc ttcaaagaac tgtctgggga tgtgatgctt tgaaaaatct aatcagtgac 1381 ttaagagaga ttttcttgta tacagggaga gtgagataac ttattgtgaa gggttagctt 1441 tactgtacag gatagcaggg aactggacat ctcagggtaa aagtcagtac ggattttaat 1501 agcctgggga ggaaaacaca ttctttgcca cagacaggca aagcaacaca tgctcatcct 1561 cctgcctatg ctgagatacg cactcagctc catgtcttgt acacacagaa acattgctgg 1621 tttcaagaaa tgaggtgatc ctattatcaa attcaatctg atgtcaaata gcactaagaa 1681 gttattgtgc cttatgaaaa ataatgatct ctgtctagaa ataccataga ccatatatag 1741 tctcacattg ataattgaaa ctagaagggt ctataatcag cctatgccag ggcttcaatg 1801 gaatagtatc cccttatgtt tagttgaaat gtccccttaa cttgatataa tgtgttatgc 1861 ttatggcgct gtggacaatc tgatttttca tgtcaacttt ccagatgatt tgtaacttct 1921 ctgtgccaaa ccttttataa acataaattt ttgagatatg tattttaaaa ttgtagcaca 1981 tgtttccctg acattttcaa tagaggatac aacatcacag aatctttctg gatgattctg 2041 tgttatcaag gaattgtact gtgctacaat tatctctaga atctccagaa aggtggaggg 2101 ctgttcgccc ttacactaaa tggtctcagt tggatttttt tttcctgttt tctatttcct 2161 cttaagtaca ccttcaacta tattcccatc cctctatttt aatctgttat gaaggaaggt 2221 aaataaaaat gctaaataga agaaattgta ggtaaggtaa gaggaatcaa gttctgagtg 2281 gctgccaagg cactcacaga atcataatca tggctaaata tttatggagg gcctactgtg 2341 gaccaggcac tgggctaaat acttacattt acaagaatca ttctgagaca gatattcaat 2401 gatatctggc ttcactactc agaagattgt gtgtgtgttt gtgtgtgtgt gtgtgtgtgt 2461 atttcacttt ttgttattga ccatgttctg caaaattgca gttactcagt gagtgatatc 2521 cgaaaaagta aacgtttatg actataggta atatttaaga aaatgcatgg ttcattttta 2581 agtttggaat ttttatctat atttctcaca gatgtgcagt gcacatgcag gcctaagtat 2641 atgttgtgtg tgttgtttgt ctttgatgtc atggtcccct ctcttaggtg ctcactcgct 2701 ttgggtgcac ctggcctgct cttcccatgt tggcctctgc aaccacacag ggatatttct 2761 gctatgcacc agcctcactc caccttcctt ccatcaaaaa tatgtgtgtg tgtctcagtc 2821 cctgtaagtc atgtccttca cagggagaat taacccttcg atatacatgg cagagttttg 2881 tgggaaaaga attgaatgaa aagtcaggag atcagaattt taaatttgac ttagccacta 2941 actagccatg taaccttggg aaagtcattt cccatttctg ggtcttgctt ttctttctgt 3001 taaatgagag gaatgttaaa tatctaacag tttagaatct tatgcttaca gtgttatctg 3061 tgaatgcaca tattaaatgt ctatgttctt gttgctatga gtcaaggagt gtaaccttct 3121 cctttactat gttgaatgta tttttttctg gacaagctta catcttcctc agccatcttt 3181 gtgagtcctt caagagcagt tatcaattgt tagttagata ttttctattt agagaatgct 3241 taagggattc caatcccgat ccaaatcata atttgttctt aagtatactg ggcaggtccc 3301 ctattttaag tcataatttt gtatttagtg ctttcctggc tctcagagag tattaatatt 3361 gatattaata atatagttaa tagtaatatt gctatttaca tggaaacaaa taaaagatct 3421 cagaattcaa aaaaaaaaaa aaa //