LOCUS BC041656 1908 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens beta-carotene oxygenase 2, mRNA (cDNA clone MGC:47563
IMAGE:5175925), complete cds.
ACCESSION BC041656
VERSION BC041656.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1908)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1908)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: c Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41350209.
FEATURES Location/Qualifiers
source 1..1908
/db_xref="H-InvDB:HIT000052584"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47563 IMAGE:5175925"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1908
/gene="BCO2"
/gene_synonym="B-DIOX-II"
/db_xref="GeneID:83875"
/db_xref="HGNC:HGNC:18503"
/db_xref="MIM:611740"
CDS 81..1601
/gene="BCO2"
/gene_synonym="B-DIOX-II"
/codon_start=1
/product="BCO2 protein"
/protein_id="AAH41656.2"
/db_xref="GeneID:83875"
/db_xref="HGNC:HGNC:18503"
/db_xref="MIM:611740"
/translation="MFFRVFLHFIRSHSATAVDFLPVMVHRLPVFKRYMGNTPQKKAV
FGQCRGLPCVAPLLTTVEEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHW
FDGMALLHQFRMAKGTVTYRSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFER
FMSRFELPGKAAGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPSYYHSFGMT
RNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYY
SKPFVTFHQINAFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQVHNSAAKSF
PRRFVLPLNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEGGIEF
PQIYYDRFSGKKYHFFYGCGFRHLVGDSLIKVDVVNKTLKVWREDGFYPSEPVFVPAP
GTNEEDGGVILSVVITPNQNESNFLLVLDAKNFEELGRAEVPVQMPYGFHGTFIPI"
BASE COUNT 571 a 372 c 461 g 504 t
ORIGIN
1 gtgcgtgttc actgtttagt agtactcaaa actgccagtg tgagaggatt tggaaatcac
61 tggatctgct caatacaaaa atgttttttc gagtctttct ccattttatc aggagtcatt
121 ctgccactgc agtggatttc cttcctgtga tggtgcaccg gctcccagtt ttcaaaaggt
181 acatgggaaa tactcctcag aaaaaagccg tctttgggca gtgtcggggt ctgccatgtg
241 ttgcaccgct gctgaccaca gtggaagagg ctccacgggg catctctgct cgagtctggg
301 gacattttcc taagtggctc aatggctctc tacttcgaat tggacctggg aaattcgagt
361 ttgggaagga taagtacaat cattggtttg atgggatggc gctgcttcac cagttcagaa
421 tggcaaaggg cacagtgaca tacaggagca agtttctaca gagtgataca tataaggcca
481 acagtgctaa aaaccgaatt gtgatctcag aatttggcac actggctctc ccggatccat
541 gcaagaatgt ttttgaacgt ttcatgtcca ggtttgagct gcctggtaaa gctgcaggtt
601 tctcctataa ggttattcgg gttcctccag agaaggtgga ccttggggag acaatccatg
661 gagtccaggt gatatgttct attgcttcta cagagaaagg gaaaccttct tactaccata
721 gctttggaat gacaaggaac tatataattt tcattgaaca acctctaaag atgaacctgt
781 ggaaaattgc cacttctaaa attcggggaa aggccttttc agatgggata agctgggaac
841 cccagtgtaa tacgcggttt catgtggtgg aaaaacgcac tggacagctc cttccaggga
901 gatactacag caaacctttt gttacatttc atcaaatcaa tgcctttgag gaccagggct
961 gtgttataat tgatttgtgc tgtcaagata atggaagaac cctagaagtt taccagttac
1021 agaatctcag gaaggctggg gaagggcttg atcaggtcca taattcagca gccaaatctt
1081 tccctcgaag gtttgttttg cctttaaatg tcagtttgaa tgcccctgag ggagacaacc
1141 tgagtccatt gtcctatact tcagccagtg ctgtgaaaca ggctgatgga acgatctggt
1201 gctctcatga aaatctacat caggaggacc tagaaaagga aggaggcatt gaatttcctc
1261 agatctacta tgatcgattc agtggcaaaa agtatcattt cttttatggc tgtggctttc
1321 ggcatttagt gggggattct ctgatcaagg ttgatgtggt gaataagaca ctgaaggttt
1381 ggagagaaga tggcttttat ccctcagaac ctgtttttgt tccagcacca ggaaccaatg
1441 aagaagatgg tggggttatt ctttctgtgg tgatcactcc caaccagaat gaaagcaatt
1501 ttctcctagt tttggatgcc aagaactttg aagagctggg ccgagcagag gtacctgtgc
1561 agatgcctta tgggttccat ggtaccttca tacccatctg atgggacaac cacaaggtct
1621 ggaaactagg tttaaaataa gtgtgcactt ggacataaag actggagaaa taaacactga
1681 ggactccaaa aggggggcaa ggaggaagag gggcaggggt taaaaagcta cctattgaat
1741 actatgttcc ctatttgggt gatgggttcg ttagaagtcc aaacctcagc agcacacaat
1801 atactcatgt aacaagcctg cacatgtacc ccagaatcta aaataaaaat aaaaagaaaa
1861 acaaagaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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