LOCUS       BC041595                3546 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1
            (chondrocyte-derived), mRNA (cDNA clone MGC:52223 IMAGE:5443230),
            complete cds.
ACCESSION   BC041595
VERSION     BC041595.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3546)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3546)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 44 Row: i Column: 24.
FEATURES             Location/Qualifiers
     source          1..3546
                     /db_xref="H-InvDB:HIT000096781"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:52223 IMAGE:5443230"
                     /tissue_type="Brain, astrocytoma, grade IV"
                     /clone_lib="NIH_MGC_98"
                     /lab_host="DH10B"
                     /note="Vector: pOTB7"
     gene            1..3546
                     /gene="FARP1"
                     /gene_synonym="CDEP"
                     /gene_synonym="MGC87400"
                     /gene_synonym="PLEKHC2"
                     /db_xref="GeneID:10160"
                     /db_xref="HGNC:HGNC:3591"
                     /db_xref="MIM:602654"
     CDS             266..3403
                     /gene="FARP1"
                     /gene_synonym="CDEP"
                     /gene_synonym="MGC87400"
                     /gene_synonym="PLEKHC2"
                     /codon_start=1
                     /product="FERM, RhoGEF (ARHGEF) and pleckstrin domain
                     protein 1 (chondrocyte-derived)"
                     /protein_id="AAH41595.1"
                     /db_xref="GeneID:10160"
                     /db_xref="HGNC:HGNC:3591"
                     /db_xref="MIM:602654"
                     /translation="MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKI
                     QMLDDTQEAFEVPQRAPGKVLLDAVCNHLNLVEGDYFGLEFPDHKKITVWLDLLKPIV
                     KQIRRPKHVVVKFVVKFFPPDHTQLQEELTRYLFALQVKQDLAQGRLTCNDTSAALLI
                     SHIVQSEIGDFDEALDREHLAKNKYIPQQDALEDKIVEFHHNHIGQTPAESDFQLLEI
                     ARRLEMYGIRLHPAKDREGTKINLAVANTGILVFQGFTKINAFNWAKVRKLSFKRKRF
                     LIKLRPDANSAYQDTLEFLMASRDFCKSFWKICVEHHAFFRLFEEPKPKPKPVLFSRG
                     SSFRFSGRTQKQVLDYVKEGGHKKVQFERKHSKIHSIRSLASQPTELNSEVLEQSQQS
                     TSLTFGEGAESPGGQSCRRGKEPKVSAGEPGSHPSPAPRRSPAGNKQADGAASAPTEE
                     EEEVVKDRTQQSKPQPPQPSTGSLTGSPHLSELSVNSQGGVAPANVTLSPNLSPDTKQ
                     ASPLISPLLNDQACPRTDDEDEGRRKRFPTDKAYFIAKEVSTTERTYLKDLEVITSWF
                     QSTVSKEDAMPEALKSLIFPNFEPLHKFHTNFLKEIEQRLALWEGRSNAQIRDYQRIG
                     DVMLKNIQGMKHLAAHLWKHSEALEALENGIKSSRRLENFCRDFELQKVCYLPLNTFL
                     LRPLHRLMHYKQVLERLCKHHPPSHADFRDCRAALAEITEMVAQLHGTMIKMENFQKL
                     HELKKDLIGIDNLVVPGREFIRLGSLSKLSGKGLQQRMFFLFNDVLLYTSRGLTASNQ
                     FKVHGQLPLYGMTIEESEDEWGVPHCLTLRGQRQSIIVAASSRSEMEKWVEDIQMAID
                     LAEKSSSPAPEFLASSPPDNKSPDEATAADQESEDDLSASRTSLERQAPHRGNTMVHV
                     CWHRNTSVSMVDFSIAVENQLSGNLLRKFKNSNGWQKLWVVFTNFCLFFYKSHQDNHP
                     LASLPLLGYSLTIPSESENIQKDYVFKLHFKSHVYYFRAESEYTFERWMEVIRSATSS
                     ASRPHVLSHKESLVY"
BASE COUNT          879 a         1015 c          969 g          683 t
ORIGIN      
        1 gcgacccgga gcccgctccc cacccacccc gcctgctccg ccctcccctc cgccccgcgc
       61 cacctttgat ggctcggacc tcagccggcc accgccagcc ctgctcgcgc gcccgcgccg
      121 ccgccgtccg cgggtattaa tagccggcgc cgccgcgccc tcggccgccg ggggcttggg
      181 agccgccgat cccggagccc gagccgggag agggagccgc cgcagccgcc ggcgctgtgg
      241 agatattctc taagccgctt tcatcatggg agaaatagag cagaggccga ccccaggatc
      301 acgactgggg gccccggaaa attcggggat cagtaccttg gaacgtggac agaagccgcc
      361 cccaacacct tcaggaaaac tcgtgtccat caaaatccag atgctggatg acacccagga
      421 ggcatttgaa gttccacaaa gagctcctgg gaaggtgctg ctggatgcag tttgcaacca
      481 cctcaacctc gtggaaggtg actattttgg cctcgagttt cctgatcaca aaaagatcac
      541 ggtgtggctg gatctcctaa aacccattgt gaaacagatt agaaggccaa agcacgttgt
      601 tgttaagttt gtggtgaaat tctttccgcc tgaccacaca caactccaag aagaactcac
      661 aaggtacctg ttcgcgctgc aggtgaagca ggacttggct caaggcaggt tgacgtgtaa
      721 tgacaccagc gcagctctct tgatttcaca cattgtgcaa tctgagattg gggattttga
      781 tgaagccttg gacagagagc acttagcaaa aaataaatac atacctcagc aagacgcact
      841 agaggacaaa atcgtggaat ttcaccataa ccacattgga caaacaccag cagaatcaga
      901 tttccagctc ctagagattg cccgtcggct agagatgtat ggaatccggt tgcacccggc
      961 caaggacagg gaaggcacga agatcaatct ggccgttgcc aacacgggaa ttctagtgtt
     1021 tcagggtttc actaagatca atgccttcaa ctgggccaag gtgcggaagc tgagcttcaa
     1081 gaggaagcgc tttctcatca agctccggcc agatgccaat agtgcgtacc aggatacctt
     1141 ggaattcctg atggccagtc gggatttctg caagtccttc tggaaaatct gtgttgaaca
     1201 tcatgccttc tttagacttt ttgaagagcc caaaccaaag cccaagcccg tcctctttag
     1261 ccgggggtca tcatttcggt tcagtggtcg gactcagaag caggttctcg actatgttaa
     1321 agaaggagga cataagaagg tgcagtttga aaggaagcac agcaagattc attctatccg
     1381 gagccttgct tcacagccta cagaactgaa ttcggaagtg ctggagcagt ctcagcagag
     1441 caccagcctt acatttggag aaggtgccga atctccaggg ggccagagct gccggcgagg
     1501 aaaggaaccg aaggtttccg ccggggagcc ggggtcgcac ccgagccctg cgccgaggag
     1561 aagccccgcg ggtaacaagc aggcggacgg agccgcctcg gcgcccacgg aggaagagga
     1621 ggaggtcgtt aaggatagga cccagcagag taaacctcag cccccgcagc caagcacagg
     1681 ctccctgact ggcagtcctc acctttccga gctgtctgtg aactcgcagg ggggagtggc
     1741 ccctgccaac gtgaccttgt ctcccaacct gagccccgac accaagcagg cctctccctt
     1801 gatcagcccg ctgctgaatg accaggcctg cccccggacg gacgatgagg atgagggccg
     1861 gaggaagaga ttcccaactg ataaagcgta cttcatagct aaggaagtgt ctaccaccga
     1921 gcgaacatat ctgaaggatc tcgaagttat cacttcgtgg tttcagagca cagtgagcaa
     1981 agaggacgcc atgccggaag cactgaaaag tctcatattc ccgaattttg aacctttgca
     2041 caaatttcat actaattttc tcaaggaaat tgagcaacga cttgccctgt gggaaggccg
     2101 ctcaaatgcc caaatcagag attaccaaag aatcggcgat gtcatgctga agaacattca
     2161 gggcatgaag cacctggcgg ctcacctgtg gaagcacagc gaggccttgg aggccctgga
     2221 gaatggaatc aagagctccc ggcggctgga gaacttctgc agagactttg agctgcagaa
     2281 ggtgtgttac ctaccgctca acaccttcct cctgcggcca ctgcaccggc tcatgcacta
     2341 caagcaggtc ctggagcggc tgtgcaaaca ccacccgccg agccacgccg acttcaggga
     2401 ctgccgagcc gctttggcag agatcacgga gatggtggca cagctccacg gtacgatgat
     2461 caagatggag aatttccaga agctgcacga actcaagaaa gatttgattg gcattgacaa
     2521 tcttgtggtt ccgggaaggg agttcatccg tctgggcagc ctcagcaagc tctcggggaa
     2581 ggggctccag cagcgcatgt tcttcctgtt caacgacgtc ctgctataca cgagccgggg
     2641 gctgacggcc tccaatcagt ttaaagtcca cgggcagctc ccgctctatg gcatgacgat
     2701 tgaggagagc gaagacgagt ggggggtgcc ccactgcctg accctccggg gccagcggca
     2761 gtccatcatc gtggccgcca gttctcggtc cgagatggag aagtgggttg aggacatcca
     2821 gatggccatt gacctggcgg agaagagcag cagccccgcc cctgagttcc tggccagcag
     2881 cccccctgac aacaagtccc ctgatgaagc caccgcggct gaccaggagt cagaggatga
     2941 cctgagcgcc tcgcgcacat cgctggagcg ccaggccccg caccgcggca acacaatggt
     3001 gcacgtgtgc tggcaccgca acaccagcgt ctccatggtg gacttcagca tcgcagtgga
     3061 gaatcagttg tctggaaacc tgctgaggaa attcaaaaac agcaacgggt ggcagaagct
     3121 gtgggtggtg ttcacaaact tctgcctgtt cttctacaaa tcacaccagg acaatcatcc
     3181 ccttgccagc ctgcctctgc tcggctactc gctcaccatc ccctctgagt ccgagaacat
     3241 ccagaaagac tacgtgttca agctgcactt caagtcccac gtctactact tcagggcgga
     3301 aagcgagtac acgttcgaaa ggtggatgga agtgatccgc agtgccacca gctctgcctc
     3361 gcgaccccac gtgttgagcc acaaagagtc tcttgtgtat tgatggccgg acacactcgt
     3421 ttccgcagtg gctgctttcc tggaagacgt ttcctttctt ctgtattaat gaagcctggt
     3481 aaaattaaca cctgtctgaa aatcaaaaac atggcttccc agcagctcaa aaaaaaaaaa
     3541 aaaaaa
//