LOCUS BC041401 3434 bp mRNA linear HTC 29-AUG-2005
DEFINITION Homo sapiens cDNA clone IMAGE:5277957, with apparent retained
intron.
ACCESSION BC041401
VERSION BC041401.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3434)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3434)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: l Column: 15
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3434
/db_xref="H-InvDB:HIT000096673"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5277957"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1076 a 539 c 599 g 1220 t
ORIGIN
1 agcggggggt tcccttggct ccatgttgtt cccaggtggc ccattgtcct gccttgcttt
61 actccattct ccatagattg tttctttgat tattcccaat gcaagtacct ggatgtttca
121 gttgcaggtg ctgtatttat gtataccttg cattcctgtc tatgagaact gcacagtcta
181 gctgcttcta gtcagcaatc tcgatcactt ttctctaaag ggaacctact tttttatatt
241 aaaaggattc aatatttttc aaaagcaaat ttcaatgtaa tttaactctt acatttgatg
301 ctgtgtcttc atttctagaa tttatgtgaa agaacatggt cagtggttgc accagagttg
361 tgagaggttc ttctatatta gatggacaga tttatatact tttccatgga ggattaagta
421 aactgaaacc taagacacac gaagaaattc taagtggaaa ggccacttat tagttagttt
481 acagcagtat cgtaagtgac aggatgatag gagtgtggta agtgatcagg ataataatct
541 gcttagtaag agaaacaatt tgaattttag aaggaaattg ccttaccatt tgcaaattaa
601 ggtaattaaa atacagtgaa tttcaaaatg cctttttaat gacaatgtgt gaacttaatt
661 tgttttaata aaccaaaatt gttgttattg tgttaaggct attttacatt gaatgtgtat
721 cttgccactg atgttaactt atcccatctt acccaaggtt gtaggtaaca atatactatt
781 gggtgacagt ggactaacat ctctagtgat ccctttgtca gtggtcttta acttaaaata
841 atttagagaa tatggtttct acaacttaca tttttgtttt cttgtaacta cagattatta
901 tgatggttgt aatgaagatt atgagtataa ttggagctat atgtttctga attctgaaca
961 actatttata aaattttatc ctactttttt ctgttgaaca tatgacttct ctggtctgct
1021 aaacacatac agacctttag ttttggttta catggattta aatatataga tatatcactg
1081 taaaataaac ttcaggtgta acagatttat agagaaagta atcatatttg tttatggttg
1141 tgtacctact ttgagaagaa aagaaaaata ttagaatgaa cagataattt tacaagtgtt
1201 gatcacttac cagcaaacca gaaacttcag agattttgaa agcaaatcta ttttctatgc
1261 tgtgtattaa attcatttat ctaaaatgtt attgctcctg gcttagaatc atcttgtgca
1321 aattctcttt ttttgttgtt tgtctgtttg cctgttgctc accatagaca taattttctt
1381 ttcataaaac attctttgta taatcacctc agagattatg aaagtgactt tgataaaatt
1441 taatggtgtt cacaaaataa ttttcacgtg agtaatttca cagtgcgtgt attgtatgtt
1501 atttagtgta ttttatattt tgtttcaatt agagaatgct attgaatcca gtttttgttt
1561 agttactgtt cattttactt tataaaattg acataattga gtttattaaa tttattgggc
1621 caatttaagt aaacagttga acgtttcata agtcatgagg tctttttggc atatacatga
1681 agtaaacaaa gacaatacta gctatgtaat agaagctaca taattagaag taaatattct
1741 ttttgaaatt ggcctgtggt ctcaggtgaa aaatggaaaa tatctatagt aaaaaaaatg
1801 acattaattc tgcatatgaa gagagcataa ttgtacccat gccacacaat tgactcacaa
1861 ttgaaacaag atgaagagat ggacatttta gcaaaactaa gtgaaaacct tgtaaaattt
1921 tcagattatg tttctacatt taaacatcta ctgggggagg cagaggccaa ttctatgcag
1981 tcaaacctgg aattgctgac acaggttaag agtatccacc acaggtatcg aaacctaaaa
2041 tgccctgaac tcttttcata tagattaata aaatatggtt ttagtcttcc ttctctatat
2101 tctggcttag acagaactat caagccattt caagtagatt taattctaga tctttttttt
2161 tttttctttt tttgagatgg agtcttgctc tgtcacccaa gctggtgtgc agtggtgtga
2221 tctcggctcg ctgcagcctc cacctcccag gttcaagcaa ttctcctgcc tcaccctccc
2281 aaatagctga gactacaggc acctgccacc aggcccagct aattttttgt atttttagta
2341 gggatggggt ttcaccatgt tagctaggat ggtcttgatc tcctgacctc atgatccacc
2401 cacctcagcc ttccaaagtg ctgggaatgc acatgtgagc caccgcgcct gtccttgatt
2461 ttagatcttg acacagcaca tcctcaactt attgtctccg aggatagaaa agctgtgtga
2521 tggaagaaca aaaccaaaca tatgttataa cccaaggaga ttttatttct gccctgcttt
2581 cctgggctct cagaagtgta gttctgacag acattactgg aaggtagagg tgggaaacaa
2641 gcctaaatga aaattaggtg tgtgtcaaga ttgtcttctt aggacctggc aggatcagcc
2701 ttcagttctg ggttgatttg ggggcaattg gatgatatat agagtggtta tgctgcatca
2761 ggtcctaaga aaacccacct tctgccagta gtaaaatcca gtaagattgg tattcttttg
2821 gactatgaat tgggtgattt tttaaagtaa tataaataat aggtttgttc tgtatatttt
2881 aatgatcttt cacaagagct gtttggcctt atttctatgc tgaagcagat tctgaacgtc
2941 ttaaaatctg ttcattatca gatgctgaaa gataaagagc aagtaaatga atctatttca
3001 gtttttgtgg gtaatttagc cagtaaattt aatcttattt ctttaatctt taagttttac
3061 tactgaaggc cagaatagat ttttttctct taaatttttg gcaagtataa aagcacattc
3121 agaatgtcac tttcatagat actatgaata tcaattgtca agtgtgttga tttctaagat
3181 aaaatatttg agaattaata ttacccaact tgtccaataa aatgttttta agttgcctat
3241 tttttaaaaa atctatcaat tttgaattgc atacctagct aaattttttt aagattgagg
3301 ataatatgta aaataattta tacaagtaat ataaactaag tttacttaaa ttatttactt
3361 atttaagaaa tctaattaca ttttaaataa attgctgtta cctgttaaaa aaaaaaaaaa
3421 aaaaaaaaaa aaaa
//