LOCUS BC041383 3954 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens ADP-ribosylation factor GTPase activating protein 3, mRNA (cDNA clone IMAGE:5275602), with apparent retained intron. ACCESSION BC041383 VERSION BC041383.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3954) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3954) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 75 Row: h Column: 1 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..3954 /db_xref="H-InvDB:HIT000096658" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5275602" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" BASE COUNT 1030 a 872 c 846 g 1206 t ORIGIN 1 agcggaggat tgcttgaatc caggagttgg aggctgcagt gagccatgat catgccacac 61 taccctccag cctaggtgac agagtcagac catctcaaaa aacaaagaaa agggccagga 121 gcggtggctc acgcctgtga tcctcggcct cccagagtgc tgggattgcg ggcgtgagcc 181 actgcgcctg gccatacgta gttttacgaa aatattaatg tgcatgcttt tctctgtagt 241 cttccttttt tcatcaacat gggtgttcca ccaatgacac caatgccaag tacaacagtc 301 gtgctgctca gctctatagg gagaaaatca aatcgctcgc ctctcaagca acacggaagc 361 atggcactga tgtaagtcac tggaggctgg attgtttcct ttagatacat gttcacttca 421 tagaaaaagt gatttttatc ctgaatagta aaacttttct acctgagttg tcttacaagg 481 aattagtgta cagtagattc ttactattga agtagttatg ttctgtaaat tcatcatgag 541 tactggatta gtgaatacta aaacattgct cctaggagaa atacaggatt aggttcctat 601 aagctctggt ctcattttca tcaactgatc aatacataac cttatttaac atgtgtttct 661 atttaaagac acctttttaa atatatattg atggctcatg aatattgaac tcacagccaa 721 ggactataac tcagccctga atgaagctta tttaatgcct gaattttctc catgaggcac 781 atcacagcct tcatgtgctt cagaacatta gatagccctt cagtactgca cttgagaggc 841 atcttaaaaa atgacatcct caataaaaag catgggaata tgaagaacat agcacaaaat 901 aaactgcaga aaggacattt gttatgagaa ctgaaacaag aaggcagagt agtgtgtctt 961 gttctacctc agctgagaat gtgcttcttg ggcaactcat tttttgctgc actattctcc 1021 aaatgactga aaacaccacg aggactaatt ttgggttaaa cgtaaatttt agcaagtagg 1081 tagattcata aatatggaat ccatgaataa caaggattga ttatcatttg gaacctgcat 1141 ttagatatga agtctttgat ctttcctttt cagaaatggt ttatgtgttt gaggtccttg 1201 acttcctcaa ggtttggaag caaaatttac tggatgatag attactaaag tgcacgcaga 1261 ggtcctctgt agggatgtta ctgattttat aagaatggaa agcaccaatc tttaggaaac 1321 aggtctctaa gggaagtgaa aggtatcaaa taaaatcctt tacaggccgg atgaaatgct 1381 cagccctgtg ttgttttttt gttctagctg tggcttgata gttgtgtggt tccacctttg 1441 tcccctccac caaaggagga agattttttt gcctctcacg tttctcctga ggtatgtatt 1501 atgcttcaca tcattttaaa gtgtgcttac tctgacagtt aacaaaaggt gcatatttaa 1561 aatgttagga tgtaggctaa gctcttgtaa caagaagtgc tgaaacataa ctactgaaga 1621 gagaaatgac attatcaaca attccaaggt taggatatct gctattgact gatggactta 1681 ctttgctgtt ctcaacatgt ggcttccatc tcagggtcta aagcagctgc tccagtttaa 1741 gactctccca gattaagaga aaaagacaag catccttgag agctaatgcc ctattcttct 1801 atttatttat ttttgggggg actgaatctg gctctgtttc ccaggctgga gtgcagtggc 1861 acgatctcag ctcattacaa cctctgcccc ctgggttcaa gtgattctcc agcctcagcc 1921 tcccgagtag ctgggactac aggtgcgcac caacacaccc agctaatatt ttttttgaga 1981 tggagtttcg ctcttgtcac ctagggtgga gtgcaatggt gtgatcttgg ctcactgcaa 2041 tctccgcctc ctgggttcaa gcgattctct tgcctcagcc tcccgagtag ctgggacaac 2101 aggtgcacgc caccacacct ggctaatttt tgtatttgta gtagagacga ggtttcacca 2161 tattggctag gctggtctcg aactcctgac ctcaggtgat acccccgcct tggccaccca 2221 aagttctggg attataggtg tgagccacca taccccacca cagatgccct attcttttac 2281 agaaaaagtc tggagggagc tcccatccct tctacttatg tcctatgagc tggaatttag 2341 ttgcatgtct tatctagctg ctagggagaa ctgagaattt attactagta gtgtgccaca 2401 gttcagttca gagctctgaa actgactaaa aatgaaaaca tttttaatag gggtttcatt 2461 ctcagtgctc cagttttgct gtttatgtag tattatctca aagctattgg atgagttaat 2521 gcaggtaaaa gtacttagta cctggcacaa agtaagcctt cagtaagtgc tctaaatatc 2581 actatcttca tctttgtgac ctgatagcaa cagtgacagc aatccatagt acttctgtgg 2641 cctctcctca gatcacttag atctagggaa agtaaagcct aaaaggcgac aatatttact 2701 atttggccct ttcttttctt tcttcctttc tttttttttt ttttttttta aagacggagt 2761 tttccctctt gtttcccagg ctgtagcgca atggcgcgat ctcggctcac tgcaacatcc 2821 acctcccggg ttcaagcgat tctcctgcct cggcctccca actagctggg attataggca 2881 tgtgccacca cacctggcta attttgtatt tttagtggag acggggtttc gccatgttgg 2941 tcaggcttgt ctcaaactcc tgacctcagg tgatccacct gcttcggcct cctaaagtgc 3001 tgggattata ggcatgagcc accacaccgg gcctactatt tagcccttta aggtaacgtg 3061 tgcctacctc tgtcttggac catcatatgt tctgccagct actctagctc ctcccagtcc 3121 cactgggtaa ggagcacgat ttgttgaact cttgctcaat ctattcttta attttctttt 3181 tttctttcgt tttttttttt tttgagatgg agtcttactc ttctgtcacc cacgttggag 3241 tgcactggca caatcttggc tcactgcagc ctctgcctcc caggttcagg tgattctcct 3301 gcctcagcct cccaagtagt tgggattaca ggcccacacc accacgcctg gctaattttt 3361 tttgtaattt tagtagagac agggtttcac catattggcc agtctggtct cgaactcctg 3421 acctcaggtg atctgcctgc cgcagcctcc caaaatgctg ggattacaga tgtgagccac 3481 tgtgcccagc ttattcctta attttcaatt taaaactatg taaagttgta cacaggttgt 3541 taaagcttgt tttttgggtt tttttttttt tttgctatta taatttgcac atacttatta 3601 gcattgtcac agtcaatagt taccaaaaat ggttatcaag aaagaggaga acaggccagg 3661 catgttggct catgcctgta atctcagcag tttgggaggc cgaggtggga ggatagcttg 3721 agcccaggcg tttgagacga gcctgggcag catagtgaga ctccttctct acaaaaaatt 3781 taaactttag ctgggcgtgg tggcacatgc ctgcaatctc agctactcag gaggctgagg 3841 tggaagcact gcttgagcct gggaggtcaa ggctccagtg agctgtgatt gtgcttctgc 3901 actctagcct gggcaacaga agagtaagac cctgtttcta aaaaaaaaaa aaaa //