LOCUS BC041350 4844 bp mRNA linear HUM 30-JUL-2005
DEFINITION Homo sapiens protein phosphatase 1K (PP2C domain containing), mRNA
(cDNA clone IMAGE:5272432), complete cds.
ACCESSION BC041350
VERSION BC041350.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4844)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4844)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: a Column: 19
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..4844
/db_xref="H-InvDB:HIT000096630"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5272432"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4844
/gene="PPM1K"
/gene_synonym="DKFZp761G058"
/gene_synonym="PTMP"
/gene_synonym="UG0882E07"
/db_xref="GeneID:152926"
CDS 1122..1574
/gene="PPM1K"
/gene_synonym="DKFZp761G058"
/gene_synonym="PTMP"
/gene_synonym="UG0882E07"
/codon_start=1
/product="PPM1K protein"
/protein_id="AAH41350.1"
/db_xref="GeneID:152926"
/translation="MSTAALITLVRSGGNQVRRRVLLSSRLLQDDRRVTPTCHSSTSE
PRCSRFDPDGSGSPATWDNFGIWDNRIDEPILLPPSIKYGKPIPKISLENVGCASQIG
KRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMYVQ"
BASE COUNT 1457 a 835 c 961 g 1591 t
ORIGIN
1 agcggctcta cctgcagtgg ggtaggagtt cccctgggta acaccctgta atgccaagag
61 aggttttagg attgagtttc agggtggagt ccagaaatgg gggtgtaaag taatcgtttc
121 aaagaagtgt agtctcaagt gtcgttgggt tgttagggtt ggggaaagga gagctgcagc
181 tgtgaatgta aatatataga tcactcgttc agaaatcagg gctgcttgtc acaaatgcag
241 tgctgccagg ttcctgagat catacccaca taccctccta gtgagagagt ctgctaggat
301 ggggagcatc aaaactggct tatctttgtg cctctggggt gtttgcacac caatttatat
361 ttaccatagt aatatagtat gtaaagctta gtaggttaag aaatgttaaa ataaaactta
421 gatttatcct agattatgtt tttgttaaaa cttggccatt ctttggaaac agaactattt
481 taagtattct attagcctgt tattttttcc tgaagagact ttgttgctat tgttaatatt
541 tatccctacc ttttctttaa agcaatagag ttaatgaagg gaagtatatt tatttatacc
601 tgtattctgt gttcttgcta ctagaagtgt aacttgggga ccagcagctt ctgtatcacc
661 agggtgttgg ttagaaatgc agagtgactc caccccatag ccactgggtc agaacatgca
721 ttttaacaag tgattgcagg ttcaagttta agagatacat gttctgtgta tgtgcacact
781 gttaaatttt tatagaattt aaatgctgtg aatgcggtag gaaaatcgat tcatttttga
841 tccactgttc ttagaagcag gctactggat gcctacccaa tatataacat aaatatatgt
901 attttctgtc aaatccttta tgagcttcat ttttggtaat atttgatgac atatcagtta
961 tattcaaaat ttctgatggt ctctctctct ctgtctctct ccctctcctc ctctgcccct
1021 ctctccctct gtcccctgtg acttgcatca tttttcttga agacattcca ttattgttcc
1081 attgaccttt ccctcatcac tgagtccttt ggagctgagt tatgtcaaca gctgccttaa
1141 ttactttggt cagaagtggt gggaaccagg tgagaaggag agtgctgcta agctcccgcc
1201 tgctgcagga cgacaggcgg gtgacaccca cgtgccacag ctccacttca gagcctaggt
1261 gttctcggtt tgacccagat ggtagtggga gtccagctac ctgggacaat tttgggatct
1321 gggataaccg cattgatgag ccaattctgc tgccacccag cattaagtat ggcaagccaa
1381 ttcccaaaat cagcttggaa aatgtggggt gcgcctcaca gattggcaaa cggaaagaga
1441 atgaagatcg gtttgacttc gctcagctga cagatgaggt cctgtacttt gcagtgtatg
1501 atggacacgg tggacctgca gcagctgatt tctgtcatac ccacatggag aaatgtatta
1561 tgtatgtaca atgactttca ctcctgactt tgcagttcct atacttccta cttaaacttt
1621 caccctttgg ctgaggcttc cagcgtaaac atagttactt gagtggttgc atgctgctgc
1681 ttcacgaatg agcagtagtt taagtgtgcc atttattact tatggttatc acaatttcag
1741 aaatgcatgt tttaacaact cccctggggg aaagcattaa ccaaaatcta tagcacttaa
1801 tttgtgatca ttttaagtga agtggcataa tgtacatgag ataacctatg agaagcattt
1861 actcccatca gtgtaggaca gataagtgct tcagtaaatg gtaattactc tttcaagtgg
1921 tgtgaatagc tttgaatacc tgacttgttg aaaatagctt tggatgattg gcattagtgt
1981 ggaaaaatgc atttaatgca ggcattttgg agctcttccg tttatttact tcaactagta
2041 ttaatgcatt tttgaggatc acattactgc taaaattgaa agagggagaa catgtgatgg
2101 agttacgacc atgtgactat ttttgacttc ccagtgacca tttcttgact tcctgtgtat
2161 accgcattcc acgaaagaac tcacaatggg aaggaactct cgacctctca gggttgtggt
2221 agtgaggatc aattcttcaa ggacaaggac ttggactttc attgttgtgc ccttaaaagc
2281 ttatcacagt gcctgatact ttgtggattc tcaataggta ttccttagcc agtaggtctt
2341 cagcatttga caggaaaatc ctgaggcccg ttgtgtggaa tgactgctag ctagagtaac
2401 agtgaggaga aaaacctatt gtaaaatgat tgtttaaggc tctttttttc ctccccacaa
2461 agggatttgc ttcctaagga gaagaacttg gaaactctgt tgaccttggc ttttctagaa
2521 atagataaag ccttttcgag tcatgcccgc ctgtctgctg atggtatgta aaactatcac
2581 attccttgga tcctagggag tacatggggt gggggaggag taaaaaggaa acactttaag
2641 tcctttgggg gaggggattt taatggacaa ttgtttgtaa ggatttatgt agaaatgagt
2701 ttatatgaag aatcacatta aatgctgttg ggaactccaa ttaatgttaa tacctcactt
2761 ttaaatgaaa tatattggag aatttttcag aaagagaagc cccgaaacag ttctgatgtt
2821 gtactttagt ttttaaaaga ttttaaaaat gtttaatctg tttgcttatt ttatggacaa
2881 aatgtccata ctatgagttt tgttttgggt ttttggtttt ttttttagat ggatctggtg
2941 accaagtgct gaaatacact acagggtaat cacatctagc gaggacagtc attgtccaac
3001 aagaaaaaaa ttgcaaatag gtcctaaata gaaaaagaca atggttaata tgcactaatt
3061 tgtataacta gaaggaaaat atttttctgt cacttcttaa aaagctcaat cttgcagctt
3121 ttctctggta actagtgata ttttcagcat aaggtcatgc tagctgaatt taaaattttg
3181 tgtactgtat gtccttaaat tttgaaagtg aaatgtttct ggttttgact aaatttatca
3241 aaaccatttc acgaaaattc agcaaacgtt ttctagttag ctagtcccaa atcttttgct
3301 gttaaagtta accctgaaaa tttctgtacc agccaaatta atgtgtgcat gtaaccttgt
3361 aaatgatttg aaaatgaatc atgcaataat cttgatctgt atttggttca tccttttctt
3421 aaaaaaaaga aagaaaccaa gtgcaccaca gaaatgtcat ttgcacagtc ttcagttgga
3481 atacataagg atagagattg tttgcatttc acagcgaagg aactgaagat tagagtggta
3541 aaggtcagtt cagagttagg gctgggattt tcctgaccac cagcattatc tctcttctct
3601 catgaggaga ggagaaggta actctgcgat ggctctattt accatcttga gattttttcc
3661 tgagcttttt ttgagaacct tactatcaca ctcctcagga aagcattaca gtccactctc
3721 ttcagggata tgttttccag tttgtagatc atttaggccc attttctttt ctttcattcc
3781 tttggaattt ttctttttcc tttcaactgg acccttacct ttaagaagac agaagctgaa
3841 agaggtaaac tttatgcata agacttagct cttgttccaa atagttaaaa cacatgaagg
3901 aaaagaggaa atgaaatatt ttcttatggt tttattttta ttacttcctg aattttggta
3961 tgctcttatt tcatagtaac tgagttggct gtgcatctgg ctatgtctca caccacaatg
4021 tttgttgact gtagtgccgg tggtgtgccc cagctgttct gtaaatagct gcagcttact
4081 gggcaaggtt tttggatgag aatgtccaaa tttatcccag gcatgtgacc accaaccaaa
4141 aacattggcc ttctcaatgc catcagcctc ttttaaaagt atctagtcaa tgtagatgct
4201 taaaccaatc ggtgattgac ttgatgtaaa atatgacagg actcctttta ttattgaatg
4261 aagtataact caacagaatt ttgaacttaa agaatttaat taacttgcct atcttaaaag
4321 aaactttcta aagatacctt tgtcacaaaa acattaaaca gttgtataaa gaaattaatc
4381 acaaaaatgt aattcatatg ctaacttcag cagcacatac actaaaattg gaatgataca
4441 gagatcagca tggtccttgt gcaaggatgg cacacaaatg catgaagagt tccatatttt
4501 ttattcttac taaaatcaat tcatttgtaa taaagaaatt aaaatgcatt atttaattta
4561 attcctctat catatgcttt gaagtaatga tcccagaaca ttcttaagat attttaaaat
4621 gtatttttca tataatggta atttgtttga aagtataatg gagcaagaca agatgatgct
4681 cttagtgtgt actaaaagaa aaggtctatt ataatattgt tattaaatct tattttgtta
4741 ttaaatttgt tatttgttat taaaatctta ttttgtatat ataaaaaaaa aaaaaaaaaa
4801 aaaaaaaaaa aaaaaaaaaa aaaaaaagaa aaaaaaaaaa aaaa
//