LOCUS BC041345 4767 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens adenosylmethionine decarboxylase 1, mRNA (cDNA clone
IMAGE:5272193), with apparent retained intron.
ACCESSION BC041345
VERSION BC041345.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4767)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4767)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: a Column: 9
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4767
/db_xref="H-InvDB:HIT000096626"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5272193"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1384 a 853 c 940 g 1590 t
ORIGIN
1 agcggctggg ggatactgga ctaaacagcc cctccccccc cttttttttt ctgaggcgga
61 gtctcagtct gtccaggctg gagtgcattg gcgcaatctc ctctcactgc aacctctgcc
121 gcccaggttc aagcgatttt cttgcctcag cctcccaagt agctggtatt acaggcgcct
181 gccactgtgc ccggctaatt tttgtatttt tagtagagac ggggtttcat catcttggcc
241 aggctggtct tgaactcctg acgtggtgat ccacctcggc cgcctaaagt gctgggatta
301 caggtgtgag ccactgtgcc tggcctctct cttttttttt tttaaactaa gtttatatta
361 tgaatatacg aatgtttatc aaaatgctta ccatgtgcca agccctgggg atgttttgta
421 tactagaaaa ggaaaagaat aatgtgttac ttgcttcctt gagatcctaa tatttaaaag
481 tactagccaa aattgtaaat gataattaaa ttggttgatt gcaccctcag tagtacatta
541 gtattgttat aatattgtga cttttttcaa ctgcagtgag agtagcatgt ttgtctccaa
601 gagacgtttc attttgaaga catgtggtac caccctcttg ctgaaagcac tggttcccct
661 gttgaagctt gctagggatt acagtgggtt tgactcaatt caagtaagta agcaaacatt
721 taaatatttt tcaggcataa atgttagcgt tcttatcctg taatatgcga agtaaataaa
781 tttatatact tactgccttt gttacaatgc atgcaaacac gtggtaaggt gttcatacct
841 taggaagaga tctgattctc aagaacagca gaaaatagga agcagagaat gagttaggat
901 gaaattcaaa tgggagaaag aaatgaagaa gccagatact tccagtagtt aatttcttaa
961 catggctact tataataata gagaaatggt aagaaaagaa ggaaaagcaa gaaaaatgtc
1021 gttactgaaa ttgtccagtc tttataatga agagttagga tgaagagcaa cagtcagtat
1081 tgagttaaat tcttatactt ttcaagaact aaggtgtttt tacctagggt ataattttct
1141 gattagcagt tgttacattt tatttatttt ctattttttt gagatggagt ttcgctcttg
1201 tttcccaggc tggaatgcaa tagcacgatc tcagctcact gcaatctgca cctcccaggt
1261 tcaagtgatt ctcctgcctc agcctcccaa gtagctggga tcacaggtgc ccaccaccat
1321 gcctggctaa ttttttttgt atttttagta gagacggtgt ttcaccatgt tggccaggct
1381 ggtctcttaa ctcctgacct caggtgatcc acccacctca gtctcctaaa gtgctgggat
1441 tgcaggcgtg agccactgca cccggcctga attttaatct ttaacttcat aaggaaagga
1501 tggattgtca ttagtactca atacagtttt tgttgttatg aattgatcct tgtaagaaat
1561 ctaaagcaat gtgtgcttaa ccgatgctta aaactaatat gttattcccc ccaaattttt
1621 gcttatatga ctattaataa gctcagttta gaaactactg ttctagaaag gaatatactt
1681 ggtgttaata gttgttatga cccatcatca ctagactggg ctttttaaaa aaaagagaga
1741 gaaagagaga tggggcctca gtatgttgcc caggctggac tcctgggcca agtgatcctc
1801 ctgcctccta atagcgagac tacaggcata tgctaccatg ccaagctaaa atatttgagt
1861 tttgattttg ccgagttttt gatatgtgga caatagttga ttagcttcga aaagtgatag
1921 aattctacat ctaaagtcat cttttttttt ctttcttttc ttttttaata aagagcttct
1981 tttattctcg taagaatttc atgaagcctt ctcaccaagg gtacccacac cggaatttcc
2041 aggaagaaat agagtttctt aatgcaattt tcccaaatgg agcagcatat tgtatgggac
2101 gtatgaattc tgactgttgg tacttatata ctctggattt cccagagagt cgggtaatca
2161 gtcagccaga tcaaaccttg gaaattctga tgagtgagct tgacccagca gttatggacc
2221 agttctacat gaaagatggt gttactgcaa aggatgtcac tcgtgagagt ggaattcgtg
2281 acctgatacc aggttctgtc attgatgcca caatgttcaa tccttgtggg tattcgatga
2341 atggaatgaa atcggatgga acttattgga ctattcacat cactccagaa ccagaatttt
2401 cttatgttag ctttgaaaca aacttaagtc agacctccta tgatgacctg atcaggaaag
2461 ttgtagaagt cttcaagcca ggaaaatttg tgaccacctt gtttgttaat cagagttcta
2521 aatgtcgcac agtgcttgct tcgccccaga agattgaagg ttttaagcgt cttgattgcc
2581 agagtgctat gttcaatgat tacaattttg tttttaccag ttttgctaag aagcagcaac
2641 aacagcagag ttgattaaga aaaatgaaga aaaaacgcaa aaagagaaca catgtagaag
2701 gtggtggatg ctttctagat gtcgatgctg ggggcagtgc tttccataac caccactgtg
2761 tagttgcaga aagccctaga tgtaatgata gtgtaatcat tttgaattgt atgcattatt
2821 atatcaagga gttagatatc ttgcatgaat gctctcttct gtgtttaggt attctctgcc
2881 actcttgctg tgaaattgaa gtgcatgtag aaaaaacctt ttactatatg aaactttaca
2941 acacttgtga aagcaactca atttggttta tgcacagtgt aatatttctc caagtatcat
3001 ccaaaattcc ccacagacaa ggctttcgtc ctcattaggt gttggcctca gcctaaccct
3061 ctaggactgt tctattaaat tgctgccaga attttacatc cagttacctc cactttctag
3121 aacatattct ttactaatgt tattgaaacc aatttctact tcatactgat gtttttggaa
3181 acagcaatta aagtttttct tccatgagtt gagtccttaa gaaaatgatt ccagttactc
3241 attttgcata tttgctattt taacattatt ggaccctgca tttatagtcc tttgatttct
3301 tccctctccc tggtgtctcc cccaagaccc caaataaagc aatacactgt taacactgtg
3361 ggtttatata ctaattctat accccagatg gggaatgggg gagatggtcc ctgggcttaa
3421 tattctttaa agggcatggg aatttagcct ctcttttatt gtaatgtgct cttttggaaa
3481 atagttggtt agcagggaag acccagagtt gtagattgag attagggtgt actggctgaa
3541 ctgtggaaaa catacaattc tgtgttcctc agtaaatgag attagcgtct aatgagtagc
3601 acccctttac taacttagta gtagtataaa atcattttta tttagttaat taccagagag
3661 atttagcata attttgttct ggattcagta aatcaagtca gcttggatca ttcaccttaa
3721 cttttccttt agcagccatt tccactagtt tccattaagt agtgttctat aaactttgat
3781 ccaaagcaga atcaatgtct tttccatctc gtgacttaaa gttctgtgac tgtgatgcat
3841 gtgagtgttc cgacttcatc tgttcctctt aactacggtg tttcccttac catggcattc
3901 ataggatgaa atgaatgact gcccagaatg agaatttgtc cagattattc agataaacat
3961 cataaagcag aatacattat aaataagtag aatatgaata aatagaataa taaaattcca
4021 aaatactcaa tgggaaatga ctagtaatat aggctttcaa gagttggtac cttttagcta
4081 tatttgcaga ttctctggga ttttaaggaa ctgagaaaac agcaaagttg actaaatttt
4141 atatttcttg tcctctaaat attttgataa tttctggatt gatgcagtga tgtttttgtt
4201 ccttccgtat ttataaatga aacacctttt tttagtgttt ctaaacctaa aatctacttg
4261 gtttgaaatc aagtggttgg aacactgttt gacttttatt tgaagcatgt tgttgattga
4321 aaatttcatt gaggaagttt tcaatcagtg tgatcagttt gattctgtaa tgagcacagc
4381 acctaatatt ttgaggagct ctgttttgag gaccaatgct taaggtggac tttgttcgta
4441 aacaatatcc caatagattt gttgacttga ggtctggttt ggttttgttt ttgttttgtt
4501 ttgttttgtt ttgtttccaa tagaattaag aattctaatg ttgaaaaact gcacaaattt
4561 ttatgggaca aagcctagaa aagagaaatg tagtttgaat cataatctaa atcatcgtat
4621 gatagaagag ggaaagtttt ggtgccataa tttctccttt cactggtgtt ggacttaaat
4681 cagttgaaat gtatttctgt accacaattt acgcttcaat aaaagtttaa ttgtctagtg
4741 acattcagaa gaaaaaaaaa aaaaaaa
//