LOCUS BC041334 1712 bp mRNA linear HTC 16-SEP-2003 DEFINITION Homo sapiens cDNA clone IMAGE:5277044, with apparent retained intron. ACCESSION BC041334 VERSION BC041334.2 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1712) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1712) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC041334.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 75 Row: j Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 10190671 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1712 /db_xref="H-InvDB:HIT000096618" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5277044" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescript" BASE COUNT 292 a 514 c 644 g 262 t ORIGIN 1 gcggacgccc gggagcgacg agcgcgcagc gaaccgggtg ccgggtcatg cgccgccgcc 61 tgtggctggg cctggcctgg ctgctgctgg cgcgggcgcc ggacgccgcg ggaaccccga 121 gcgcgtcgcg gggaccgcgc agctacccgc acctggaggg cgacgtgcgc tggcggcgcc 181 tcttctcctc cactcacttc ttcctgcgcg tggatcccgg cggccgcgtg cagggcaccc 241 gctggcgcca cggccaggac agtgagtgcg gggcggcggg ggcctggggt ggggaggcgg 301 cgggtgacgg caacgcggcg gccgtcttca cggtgacctg cgcccgcggg ggagtcccgg 361 aggctcctct gtgcagcctc ggcctcagtt tctgtggtct gtgagatggg tgcagcctgc 421 ctggtgggag ggttgcactg ttaaagcgaa ggctgcagcg gcggacccgg ctcaggggca 481 gagaagcgtc cgtgtggtac aaccctgtgg gtggggccac ccatctgcag gtgggaaact 541 gaggctccag aggggctggg gcaggcccag ctgcatggcg gaagcggcgg ggggctgacc 601 tccggactcc tgacatcaca gaatccagtc agggctgcct gagtcggggc cccctctgct 661 tcttcccaga caccccatct ggcaggtgag gacaaggagg cacacagagg ggatgggacc 721 tgcccagggt cacactgaca ggggtggcgg agctgggtcc ccacagggcc caggacgtca 781 cggagcgggc gtctctgtcc ccagggtctg ccgagcacac tgaggtaggc cctcagtgtt 841 tgtggaatgt caggagcaag aggagaggct gggcacagca ggggatgtgg gtacctggag 901 gccaggggag tcggtgtccc cgccgggcgg ggggcactgg gaagggggcc cgggcccgct 961 ggctgccgcc tgaatcacca ccattagggc aggtaatcaa cccctgtcct tcccaccgct 1021 ttcatctggg cgccaaggcc ctcattaggc cgcacacgac gagggcggac aggggactgg 1081 ctgggccggt ccatccatgg cgggcatggc caggcggggt ggcctcgggc cggggcagag 1141 gcctggctcc gctgcctgac ctggaacagt ctctgcctct ctccaagcct cggtttcccc 1201 agctggacgg tgatgggggt gagggctagc tgagggctct cctgcccttc gtgcattcgc 1261 tggtcactaa tcgggcacct tgtgggtgct gtgctccgca tgggggaccc agtggtgaca 1321 gagacgccca ccctcctggg gctcccagag cagaggcgcg cagcagttag acacgtgaac 1381 aagggcgcag gtgggtgcac agaacagtga acggttggcc gggtgcagtg gctcacgtcg 1441 gtaatcccag cactttggga ggccgaggcg ggcagatcac gaggtcagga gatcgagacc 1501 atcctggcta acacggtgaa accccgtctc taccaaaaat acaaaaatta gccgggtgtg 1561 gtggcgggcg cctgtagtcc cagctactcg ggaggctgag gcaggagaat gacgtgaagc 1621 cgggaggtgg agcttgcagt gagctgagat cgcgccactg ccctccaccc tgggcgacag 1681 agcgagactc cgtctcaaaa aaaaaaaaaa aa //