LOCUS BC041329 2799 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens ELL associated factor 1, mRNA (cDNA clone MGC:41764
IMAGE:5284115), complete cds.
ACCESSION BC041329
VERSION BC041329.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2799)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2799)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC041329.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: m Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38788179.
FEATURES Location/Qualifiers
source 1..2799
/db_xref="H-InvDB:HIT000052538"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41764 IMAGE:5284115"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2799
/gene="EAF1"
/db_xref="GeneID:85403"
/db_xref="HGNC:HGNC:20907"
/db_xref="MIM:608315"
CDS 166..972
/gene="EAF1"
/codon_start=1
/product="ELL associated factor 1"
/protein_id="AAH41329.1"
/db_xref="GeneID:85403"
/db_xref="HGNC:HGNC:20907"
/db_xref="MIM:608315"
/translation="MNGTANPLLDREEHCLRLGESFEKRPRASFHTIRYDFKPASIDT
SCEGELQVGKGDEVTITLPHIPGSTPPMTVFKGNKRPYQKDCVLIINHDTGEFVLEKL
SSSIQVKKTRAEGSSKIQARMEQQPTRPPQTSQPPPPPPPMPFRAPTKPPVGPKTSPL
KDNPSPEPQLDDIKRELRAEVDIIEQMSSSSGSSSSDSESSSGSDDDSSSSGGEDNGP
ASPPQPSHQQPYNSRPAVANGTSRPQGSNQLMNALRNDLQLSESGSDSDD"
BASE COUNT 779 a 619 c 680 g 721 t
ORIGIN
1 aggggagaga acttgcttct ggacccgggt gggtgccggc tcggctctcc ttgtcttcca
61 gagcggtggc ccggaagcac agtcctccca gacgccagcg ccagaagctc ggatcgcggc
121 tgcaccggga gagcgccgat ctgggtgcga ggcaggtgcg gggccatgaa tgggaccgca
181 aacccgctgc tggaccgcga ggaacattgc ctgaggctcg gggagagctt cgagaagcgg
241 ccgcgggcct ccttccacac tattcgttat gattttaaac cagcatctat agacacttcc
301 tgtgaaggag agcttcaagt tggcaaagga gatgaagtca caattacact tccacatatc
361 cctggatcca caccacccat gactgtgttc aaggggaaca aacggcctta ccagaaagac
421 tgtgtgctta ttattaatca tgacactggt gaatttgtgc tggaaaaact cagtagcagc
481 attcaggtga agaaaacaag agctgagggc agcagtaaaa tccaggcccg aatggaacag
541 cagcccactc gtcctccaca gacgtcacag ccaccaccac ctccaccacc tatgccattc
601 agagctccaa cgaagcctcc agttggaccc aaaacttctc ccttgaaaga taacccctca
661 cctgaacctc agttggatga catcaaaaga gagctgaggg ctgaagttga cattattgaa
721 caaatgagca gcagcagtgg gagcagctct tcagactctg agagctcttc gggaagtgat
781 gacgatagct ccagcagtgg aggcgaggac aatggcccag cctctcctcc gcagccttca
841 caccagcagc cctacaacag taggcctgcc gttgccaatg gaaccagccg gccacaagga
901 agcaaccagc tcatgaacgc cctcagaaat gacttgcagt tgagtgagtc tggcagtgac
961 agtgatgact agtgctggat ctttcgaaac ctactttttg gtgcacaaac atgccgcaag
1021 actgagctac tttggcgtgg agtccattgc aagaggaaaa tgttatggat cagtgactgt
1081 agtaggagtt tgaggctctg gaactctcac atattcaagt ctttaactta gtggtgatgg
1141 gtgattttct cgtgtcattt ttgaacaatc tcatctttca aagtttaagt agacctgtag
1201 aagagctaac agaattatat ttctatttag ttaaaattgt taatgaaaaa cagataaatg
1261 tgccctggtc taagttactc aaaggccata tcttcaccag gccagagatt cagttttaaa
1321 cctcagcagc catcagtttg gccaagtggt tggtaccagt ggaatgaagt ctttgatggg
1381 taggagagag agggaaaacc tcaaactaca tcatagaagt atgttaaaac cactttaaat
1441 tgttgacaca aagtggtaag gaagttttgt ctgactcagc ctgacaagcc tggatagaaa
1501 tggacctcag aatacagaat ggagtccttg agtgtcagtt ggtgaggacc atggagtcct
1561 gccagctcaa cctgtcattt acagactaag aaagggaagt acacacctgg cttgtggcca
1621 gtctcctgcc ccctctctgg gctttcctca ctgttctctc ccttgaatct catttgtagg
1681 aatcaagaga ttcctataca tgggactttt agatgtacat tggcacttgg attagattcc
1741 aaaagacaaa agtgttgggt gcttctagct tgaattcagt ccctaaatac atgaggctgg
1801 gtgagcagat gaaaccggta gccactgtgc tgatgcatgt gactccattc agttggggat
1861 tttggttcca tgtggatcca tactaagtat tcttcagtca gtggatttta gcaaggggag
1921 gtaggagtgg aagagaggtg tgaagaaacc tctccgaaca aatgaaccag cagtaagttt
1981 ctaaaaatca gaatctagat agaagttctg caatatgaaa tgagcacatt ctttgataag
2041 gcgtatctat tcatgctttt gtaccactgt tttgtacctg actccctgac cgatttgtat
2101 tttttatata caactagaag gaagtcacaa gattgccttc tacagtgtgc catttccaaa
2161 tggatctgtt gttggaggaa actggttgct agtcaatgtt ctatatttaa tgaatgtgtg
2221 ataaatcatc ctgtaatcag tatggagtaa cctgtttttg tagtttggat gaatatgtcc
2281 tgagaaattt ccatccactt tggttcagcg gacatcaagg tagtaataat aatttttcct
2341 ccacaggtcc ctccactcat atggcctctc cctccacagc tagtggaggg gaagcagtct
2401 ggacttagaa aggaaatagg tggtctgtca taggggcttt cattagagtt aaacttcata
2461 gagtcaactg tttcatcatc atagtgagcc cagagagcca ctgcccagca gcatgctcac
2521 accacctacc ctagtgtagg taataggtct acgctaggac cccgtgctgg gctctcagcc
2581 catcatgaga ttttggtgga tttaatggca ggtaggaact tatttatagt ggattgataa
2641 ttgctttata attccttggt aatgacagct cagggaaggt ttcacaaggt catgatcagg
2701 agacttgaat tgttactgga tgtaggaatt gtttcactgc tcttaacttg ctcaaactgg
2761 ggcaggttcc aggaacttga actaaaaaaa aaaaaaaaa
//