LOCUS BC041172 1590 bp mRNA linear HUM 01-SEP-2006 DEFINITION Homo sapiens nuclear receptor subfamily 1, group H, member 3, mRNA (cDNA clone MGC:48988 IMAGE:5744574), complete cds. ACCESSION BC041172 VERSION BC041172.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1590) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1590) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 84 Row: k Column: 15. FEATURES Location/Qualifiers source 1..1590 /db_xref="H-InvDB:HIT000052534" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:48988 IMAGE:5744574" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1590 /gene="NR1H3" /gene_synonym="LXR-a" /gene_synonym="LXRA" /gene_synonym="RLD-1" /db_xref="GeneID:10062" /db_xref="HGNC:HGNC:7966" /db_xref="MIM:602423" CDS 177..1385 /gene="NR1H3" /gene_synonym="LXR-a" /gene_synonym="LXRA" /gene_synonym="RLD-1" /codon_start=1 /product="NR1H3 protein" /protein_id="AAH41172.1" /db_xref="GeneID:10062" /db_xref="HGNC:HGNC:7966" /db_xref="MIM:602423" /translation="MPHSAGGTAGVGLEAAEPTALLTRAEPPSEPTEIRPQKRKKGPA PKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMR RKCQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQ LSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHSREARQQRFAHFTELAIV SVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSY NREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVE RLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPP LLSEIWDVHE" BASE COUNT 401 a 445 c 454 g 290 t ORIGIN 1 ctggggtgcg gggaaaaggc gcagtctcgg tgggattgcg tgcaggaggg tcgtggtctg 61 gctgtggcgg aggagcataa gaagactctg cggtggagct gtggaagcca ggcgcacagg 121 atgcaagcag ccaggcccag ggaggcagca gctgcatcct cagagaggaa gccaggatgc 181 cccactctgc tgggggtact gcaggggtgg ggctggaggc tgcagagccc acagccctgc 241 tcaccagggc agagccccct tcagaaccca cagagatccg tccacaaaag cggaaaaagg 301 ggccagcccc caaaatgctg gggaacgagc tatgcagcgt gtgtggggac aaggcctcgg 361 gcttccacta caatgttctg agctgcgagg gctgcaaggg attcttccgc cgcagcgtca 421 tcaagggagc gcactacatc tgccacagtg gcggccactg ccccatggac acctacatgc 481 gtcgcaagtg ccaggagtgt cggcttcgca aatgccgtca ggctggcatg cgggaggagt 541 gtgtcctgtc agaagaacag atccgcctga agaaactgaa gcggcaagag gaggaacagg 601 ctcatgccac atccttgccc cccagggctt cctcaccccc ccaaatcctg ccccagctca 661 gcccggaaca actgggcatg atcgagaagc tcgtcgctgc ccagcaacag tgtaaccggc 721 gctccttttc tgaccggctt cgagtcacgc cttggcccat ggcaccagat ccccatagcc 781 gggaggcccg tcagcagcgc tttgcccact tcactgagct ggccatcgtc tctgtgcagg 841 agatagttga ctttgctaaa cagctacccg gcttcctgca gctcagccgg gaggaccaga 901 ttgccctgct gaagacctct gcgatcgagg tgatgcttct ggagacatct cggaggtaca 961 accctgggag tgagagtatc accttcctca aggatttcag ttataaccgg gaagactttg 1021 ccaaagcagg gctgcaagtg gaattcatca accccatctt cgagttctcc agggccatga 1081 atgagctgca actcaatgat gccgagtttg ccttgctcat tgctatcagc atcttctctg 1141 cagaccggcc caacgtgcag gaccagctcc aggtagagag gctgcagcac acatatgtgg 1201 aagccctgca tgcctacgtc tccatccacc atccccatga ccgactgatg ttcccacgga 1261 tgctaatgaa actggtgagc ctccggaccc tgagcagcgt ccactcagag caagtgtttg 1321 cactgcgtct gcaggacaaa aagctcccac cgctgctctc tgagatctgg gatgtgcacg 1381 aatgactgtt ctgtccccat attttctgtt ttcttggccg gatggctgag gcctggtggc 1441 tgcctcctag aagtggaaca gactgagaag ggcaaacatt cctgggagct gggcaaggag 1501 atcctcccgt ggcattaaaa gagagtcaaa ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //