LOCUS       BC041172                1590 bp    mRNA    linear   HUM 01-SEP-2006
DEFINITION  Homo sapiens nuclear receptor subfamily 1, group H, member 3, mRNA
            (cDNA clone MGC:48988 IMAGE:5744574), complete cds.
ACCESSION   BC041172
VERSION     BC041172.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1590)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 84 Row: k Column: 15.
FEATURES             Location/Qualifiers
     source          1..1590
                     /db_xref="H-InvDB:HIT000052534"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:48988 IMAGE:5744574"
                     /tissue_type="Brain, adult medulla"
                     /clone_lib="NIH_MGC_119"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1590
                     /gene="NR1H3"
                     /gene_synonym="LXR-a"
                     /gene_synonym="LXRA"
                     /gene_synonym="RLD-1"
                     /db_xref="GeneID:10062"
                     /db_xref="HGNC:HGNC:7966"
                     /db_xref="MIM:602423"
     CDS             177..1385
                     /gene="NR1H3"
                     /gene_synonym="LXR-a"
                     /gene_synonym="LXRA"
                     /gene_synonym="RLD-1"
                     /codon_start=1
                     /product="NR1H3 protein"
                     /protein_id="AAH41172.1"
                     /db_xref="GeneID:10062"
                     /db_xref="HGNC:HGNC:7966"
                     /db_xref="MIM:602423"
                     /translation="MPHSAGGTAGVGLEAAEPTALLTRAEPPSEPTEIRPQKRKKGPA
                     PKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMR
                     RKCQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQ
                     LSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHSREARQQRFAHFTELAIV
                     SVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSY
                     NREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQVE
                     RLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPP
                     LLSEIWDVHE"
BASE COUNT          401 a          445 c          454 g          290 t
ORIGIN      
        1 ctggggtgcg gggaaaaggc gcagtctcgg tgggattgcg tgcaggaggg tcgtggtctg
       61 gctgtggcgg aggagcataa gaagactctg cggtggagct gtggaagcca ggcgcacagg
      121 atgcaagcag ccaggcccag ggaggcagca gctgcatcct cagagaggaa gccaggatgc
      181 cccactctgc tgggggtact gcaggggtgg ggctggaggc tgcagagccc acagccctgc
      241 tcaccagggc agagccccct tcagaaccca cagagatccg tccacaaaag cggaaaaagg
      301 ggccagcccc caaaatgctg gggaacgagc tatgcagcgt gtgtggggac aaggcctcgg
      361 gcttccacta caatgttctg agctgcgagg gctgcaaggg attcttccgc cgcagcgtca
      421 tcaagggagc gcactacatc tgccacagtg gcggccactg ccccatggac acctacatgc
      481 gtcgcaagtg ccaggagtgt cggcttcgca aatgccgtca ggctggcatg cgggaggagt
      541 gtgtcctgtc agaagaacag atccgcctga agaaactgaa gcggcaagag gaggaacagg
      601 ctcatgccac atccttgccc cccagggctt cctcaccccc ccaaatcctg ccccagctca
      661 gcccggaaca actgggcatg atcgagaagc tcgtcgctgc ccagcaacag tgtaaccggc
      721 gctccttttc tgaccggctt cgagtcacgc cttggcccat ggcaccagat ccccatagcc
      781 gggaggcccg tcagcagcgc tttgcccact tcactgagct ggccatcgtc tctgtgcagg
      841 agatagttga ctttgctaaa cagctacccg gcttcctgca gctcagccgg gaggaccaga
      901 ttgccctgct gaagacctct gcgatcgagg tgatgcttct ggagacatct cggaggtaca
      961 accctgggag tgagagtatc accttcctca aggatttcag ttataaccgg gaagactttg
     1021 ccaaagcagg gctgcaagtg gaattcatca accccatctt cgagttctcc agggccatga
     1081 atgagctgca actcaatgat gccgagtttg ccttgctcat tgctatcagc atcttctctg
     1141 cagaccggcc caacgtgcag gaccagctcc aggtagagag gctgcagcac acatatgtgg
     1201 aagccctgca tgcctacgtc tccatccacc atccccatga ccgactgatg ttcccacgga
     1261 tgctaatgaa actggtgagc ctccggaccc tgagcagcgt ccactcagag caagtgtttg
     1321 cactgcgtct gcaggacaaa aagctcccac cgctgctctc tgagatctgg gatgtgcacg
     1381 aatgactgtt ctgtccccat attttctgtt ttcttggccg gatggctgag gcctggtggc
     1441 tgcctcctag aagtggaaca gactgagaag ggcaaacatt cctgggagct gggcaaggag
     1501 atcctcccgt ggcattaaaa gagagtcaaa ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//