LOCUS BC041166 1687 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens necdin-like 2, mRNA (cDNA clone MGC:48906
IMAGE:5730248), complete cds.
ACCESSION BC041166
VERSION BC041166.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1687)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1687)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: j Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29826297.
FEATURES Location/Qualifiers
source 1..1687
/db_xref="H-InvDB:HIT000096605"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48906 IMAGE:5730248"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1687
/gene="NDNL2"
/gene_synonym="HCA4"
/gene_synonym="MAGEG1"
/gene_synonym="MAGEL3"
/db_xref="GeneID:56160"
/db_xref="HGNC:HGNC:7677"
/db_xref="MIM:608243"
CDS 68..982
/gene="NDNL2"
/gene_synonym="HCA4"
/gene_synonym="MAGEG1"
/gene_synonym="MAGEL3"
/codon_start=1
/product="necdin-like 2"
/protein_id="AAH41166.2"
/db_xref="GeneID:56160"
/db_xref="HGNC:HGNC:7677"
/db_xref="MIM:608243"
/translation="MLQKPRNRGRSGGQAERDRDWSHSGNPGASRAGEDARVLRDGFA
EEAPSTSRGPGGSQGSQGPSPQGARRAQAAPAVGPRSQKQLELKVSELVQFLLIKDQK
KIPIKRADILKHVIGDYKDIFPDLFKRAAERLQYVFGYKLVELEPKSNTYILINTLEP
VEEDAEMRGDQGTPTTGLLMIVLGLIFMKGNTIKETEAWDFLRRLGVYPTKKHLIFGD
PKKLITEDFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPK
DWPAQYCEALADEENRARPQPSGPAPSS"
BASE COUNT 494 a 394 c 415 g 384 t
ORIGIN
1 ccgacccgca atccccgccg cggctgcttg cctaccggag tgtgcgccgg cacctgccgc
61 cggagacatg ttgcaaaaac cgaggaaccg gggccgctct ggcggccagg ccgagaggga
121 cagagactgg agccatagcg gaaaccccgg ggcttcgcgg gccggggaag acgcccgggt
181 tctcagagac ggctttgccg aggaggcccc gagcacgtcc cgcgggccgg gcggctcgca
241 ggggtcgcag ggcccctcgc ctcagggcgc ccgccgggcc caggccgccc ccgccgtggg
301 gcccaggagc cagaagcagc tggagctgaa agtgtccgag ctggtgcagt tcttgctgat
361 taaagaccag aagaagattc cgatcaagcg ggccgacata ctgaagcacg tcatcgggga
421 ctacaaggac atcttccccg acctcttcaa acgggccgcc gagcgcctcc agtacgtctt
481 cgggtataag ctggtggaac ttgaacccaa gagcaacact tacatcctca tcaacaccct
541 ggagcctgtg gaggaggatg ccgagatgag gggtgaccaa ggcacgccca ctacgggcct
601 cctgatgatc gtcttagggc tcatctttat gaagggcaac accatcaagg aaactgaagc
661 ctgggacttt ctgcggcgct taggggtcta ccccaccaag aagcatttaa ttttcggaga
721 tccaaagaaa ctcattactg aggactttgt gcgacagcgt tacctggaat accggcggat
781 accccacacc gaccccgtcg actacgaatt ccagtggggc ccgcgaacca acctggaaac
841 cagcaagatg aaagttctta agtttgtggc caaggtccat aatcaagacc ccaaggactg
901 gccagcgcag tactgtgagg ctttggcaga tgaggagaac agggccagac ctcagcctag
961 tggcccagct ccatcctctt gaaaggtgga ttcagaggga cccccgggac aagggtctga
1021 gacccaaagg cacagtttag aggattgggg gaagggagaa cgaacccagg gagcatattg
1081 ctgtaaacgc ttcaatgtgt gtagctttag gatgtgtttg caaagttttg tttttttaat
1141 gttgtgttat tttgctccag attttcatct ataaacaaag gagcatttgt tttgatttta
1201 ctctttttgg tataaaaaat tttgctagct tagtaaaacg aattggaaaa cttgactatg
1261 atctggaaca gataatgcaa gaaggaacac ataagtaagt tgctttggtg ccaagaaaat
1321 aaaaaagcta ttatcaggtc tcctaactac cccagtttgt aaggaaaaat aaaagttttt
1381 ataaaattaa aaaaaataat tgcctatatc cttattatgt taacctattt tatttttcta
1441 tatttcgtac atatataagt attattcatg gttccaagca atgagtgtaa tgtattttct
1501 cccaatagta attgtttata ttcataatta ttcagctctg ctgctaaaca cgtagttcca
1561 cttcgttttt ttcttcttgc tactgtagtt attacaataa atactgtatt tttgaagcaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaa
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