LOCUS BC041139 2630 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 22 (KOX 15), mRNA (cDNA clone
MGC:47687 IMAGE:5751460), complete cds.
ACCESSION BC041139
VERSION BC041139.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2630)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2630)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: j Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55775473.
FEATURES Location/Qualifiers
source 1..2630
/db_xref="H-InvDB:HIT000096597"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47687 IMAGE:5751460"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2630
/gene="ZNF22"
/gene_synonym="HKR-T1"
/gene_synonym="KOX15"
/gene_synonym="Zfp422"
/gene_synonym="ZNF422"
/db_xref="GeneID:7570"
/db_xref="HGNC:HGNC:13012"
/db_xref="MIM:194529"
CDS 595..1269
/gene="ZNF22"
/gene_synonym="HKR-T1"
/gene_synonym="KOX15"
/gene_synonym="Zfp422"
/gene_synonym="ZNF422"
/codon_start=1
/product="zinc finger protein 22 (KOX 15)"
/protein_id="AAH41139.1"
/db_xref="GeneID:7570"
/db_xref="HGNC:HGNC:13012"
/db_xref="MIM:194529"
/translation="MRLAKPKAGISRSSSQGKAYENKRKTGRQRQKWGMTIRFDSSFS
RLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSFFQSSNLIQHR
RIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSSHLIQHQRT
HTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWKAGTGRK
SVAGLR"
BASE COUNT 834 a 505 c 549 g 742 t
ORIGIN
1 tgaaatcaga ctttggagcc acaaagaacc attccaattc tgggtcgtcc gcttacacac
61 ggtgaacgga gcacatttct tctctgagcc ttggttcctt tcctgtaaat ggagtataac
121 cactcccatc ttgcaggagc tttttggtga taattaaggt gacttcgtga aaagtaccag
181 ggtctcaaaa atctcaaatt ttgtggaaag tatgcagttt ctaggttgga gaggctagag
241 tttggtttca aaagcctcga ccacacacag gggcggttac agctcttgag gtcccggggg
301 tcacaggacg ccttccgagt tggggggagg agaaaacaaa accacaggaa gaaacgaaca
361 acgctttcgg gtgggcccgg gaccatagag ggtcgctccg ccactttcct agagcgaccg
421 cggcggcgcc agagcgcggc gaggccctca cttccggcgg cgcgggaggc gcccagcgag
481 ccagagtggt ggctggtccc gcgcgaaaat tctgagctgt acacctctag gaaatgaaac
541 actagttcag aagaagcctg taaactctct tacaaataca tttggttatt caccatgagg
601 ttagcaaagc ctaaagcggg tatttctcgg agctcaagcc aaggaaaggc ctatgagaac
661 aagcgcaaaa caggccggca gcggcagaag tggggcatga ctattcgatt tgactcaagc
721 ttcagtagac tcagaagaag cttggatgac aaaccctata aatgtactga atgtgaaaag
781 agtttcagtc agagttcaac tctttttcaa caccagaaga tccatactgg aaagaaatcc
841 cataaatgtg ctgattgtgg gaaaagtttc tttcagagtt ctaatctcat tcagcatcga
901 cggatccata cgggggaaaa gccctacaaa tgtgatgagt gtggagaaag cttcaaacag
961 agctcaaatc tcattcagca ccagagaatt catactggag aaaaacccta tcagtgtgat
1021 gagtgtggcc ggtgtttcag ccagagctcc caccttattc aacatcagag aacccacact
1081 ggggagaaac cctaccagtg cagtgaatgt ggcaaatgtt tcagtcagag ctctcatctg
1141 aggcagcaca tgaaggtgca taaagaagag aagcctcgta aaacccgggg caaaaatatc
1201 agggtgaaga ctcacttacc ctcttggaaa gctggtacag gaaggaagtc tgtggctggt
1261 ctccgttaag tatagggctt tttgacagct ttttgagacc tcttaagaaa aaataaaaag
1321 taaaaaatga aaggaatctt ttttagaaat agagatgctt tatagtagat cacttaaata
1381 ctggatcttt tgctagtgtg aaaacattgg gaatttaatg acattattga gctgaaagaa
1441 attacatgag tccagctacc ctcatttctt ttttatgtga catggagcac aaagaactga
1501 aaatatgttt tgagggagca tgacatcctt gacctcattt gaaattactt ccattttcaa
1561 aaaccatcat gttttgcaga tacattttga gaaaaaccat catgttttga ggatacattt
1621 gtgaaagtgc aggcatgcca atgactactc agttttagga cttttgtgga agaaaaatta
1681 aaagggagaa gaaatcaatt ccactacttt tgaagttctg caacagatga gattttgttt
1741 gtaaagtttt gtagtatatt aaccattggt ttatcactct agattcaaca tattaaaatg
1801 tattcaagct cacagatttt taatcagtaa ggcctatcta tattagttgt cttttatttc
1861 ttctccttgt ggacagttgt taatgaaagg agtaaggatt tccctttttt tgttttgttt
1921 gttttgtttt ttttaaccaa attcttagag atactataga atccaaatga gaactgaatt
1981 ggacctcaag tcttctattc ctactaatag agttctttgt gatggtaact gctgtgtcgt
2041 ttgttttcca caagttggga tggattcatg tcgatacatc cccatgccct tgacctcttc
2101 tggcattctc ctgtgctctg acaaactgag ccagcctttt agatctacat gaataaacaa
2161 actattttac caagaaaaat ctcagcttgc ttactgctta attaaaaacc tacaatttac
2221 acacctccct gccttcaaga ctgtgagctt tggatagccc tgcttaaatg tttgtcaaca
2281 acaagagtcg taatgtgtca gtacattgta gctcctttga aatttaactc tttctgtgtt
2341 acatgaattg ttttaaggag tccggcaaac atgtttcttc acttccatga gaatggtgcc
2401 aagtgtcaga ctctaatgag ccctcagctc aggttttaat ttctattgaa tgctaacatt
2461 cttctgattt tttggtatct tttataatca tatcggtttc tgctgtatta atgacaatta
2521 ttcatgaaaa taaaaaatga aatattttgt atactaaaaa aaaaaaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//