LOCUS BC041129 2824 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens aryl hydrocarbon receptor nuclear translocator-like, mRNA (cDNA clone MGC:47515 IMAGE:5753529), complete cds. ACCESSION BC041129 VERSION BC041129.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2824) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2824) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: k Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42716310. FEATURES Location/Qualifiers source 1..2824 /db_xref="H-InvDB:HIT000052515" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47515 IMAGE:5753529" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2824 /gene="ARNTL" /gene_synonym="BMAL1" /gene_synonym="BMAL1c" /gene_synonym="JAP3" /gene_synonym="MGC47515" /gene_synonym="MOP3" /gene_synonym="PASD3" /gene_synonym="TIC" /db_xref="GeneID:406" /db_xref="HGNC:HGNC:701" /db_xref="MIM:602550" CDS 384..2261 /gene="ARNTL" /gene_synonym="BMAL1" /gene_synonym="BMAL1c" /gene_synonym="JAP3" /gene_synonym="MGC47515" /gene_synonym="MOP3" /gene_synonym="PASD3" /gene_synonym="TIC" /codon_start=1 /product="aryl hydrocarbon receptor nuclear translocator-like" /protein_id="AAH41129.2" /db_xref="GeneID:406" /db_xref="HGNC:HGNC:701" /db_xref="MIM:602550" /translation="MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSST DYQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC NAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLF VVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRER LIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKDRK SFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRV KSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVL QTREKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVLEGGDP TFPQLTASPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRI RGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSSGLLSGQAQENPGYPYS DSSSILGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWP L" BASE COUNT 849 a 618 c 646 g 711 t ORIGIN 1 ttagggaagg cagaaagtag gtcagggacg gaggtgcctg tttacccgcg ccggactcac 61 cgccgccgcc gccgcgggat ccgagtgcgg gcgcgggcgc gggcgctccc ggcgagccac 121 ggtggtgctg gctagagtgt atacgtttgg acccaagctt aacttttcca atgtggaatc 181 ctgggccttc attggttccg atgtcatagg aatctacgct agagggcttc ctgtgtgccg 241 ggcactgtgg tttttggaag aagctgaccg cctgaaaaga aattataaaa catgaaaatc 301 gctttgaggt gaccaagtcc agaggcccct aactcctccc aagctggatc tggggtgtaa 361 gaactgtgac ttcagatcat ccaatggcag accagagaat ggacatttct tcaaccatca 421 gtgatttcat gtccccgggc cccaccgacc tgctttccag ctctcttggt accagtggtg 481 tggattgcaa ccgcaaacgg aaaggcagct ccactgacta ccaagaaagc atggacacag 541 acaaagatga ccctcatgga aggttagaat atacagaaca ccaaggaagg ataaaaaatg 601 caagggaagc tcacagtcag attgaaaagc ggcgtcggga taaaatgaac agttttatag 661 atgaattggc ttctttggta ccaacatgca acgcaatgtc caggaaatta gataaactta 721 ctgtgctaag gatggctgtt cagcacatga aaacattaag aggtgccacc aatccataca 781 cagaagcaaa ctacaaacca acttttctat cagacgatga attgaaacac ctcattctca 841 gggcagcaga tggatttttg tttgtcgtag gatgtgaccg agggaagata ctctttgtct 901 cagagtctgt cttcaagatc ctcaactaca gccagaatga tctgattggt cagagtttgt 961 ttgactacct gcatcctaaa gatattgcca aagtcaagga gcagctctcc tcctctgaca 1021 ccgcaccccg ggagcggctc atagatgcaa aaactggact tccagttaaa acagatataa 1081 cccctgggcc atctcgatta tgttctggag cacgacgttc tttcttctgt aggatgaagt 1141 gtaacaggcc ttcagtaaag gttgaagaca aggacttccc ctctacctgc tcaaagaaaa 1201 aagatcgaaa aagcttctgc acaatccaca gcacaggcta tttgaaaagc tggccaccca 1261 caaagatggg gctggatgaa gacaacgaac cagacaatga ggggtgtaac ctcagctgcc 1321 tcgtcgcaat tggacgactg cattctcatg tagttccaca accagtgaac ggggaaatca 1381 gggtgaaatc tatggaatat gtttctcggc acgcgataga tggaaagttt gtttttgtag 1441 accagagggc aacagctatt ttggcatatt taccacaaga acttctaggc acatcgtgtt 1501 atgaatattt tcaccaagat gacataggac atcttgcaga atgtcatagg caagttttac 1561 agacgagaga aaaaattaca actaattgct ataaatttaa aatcaaagat ggttctttta 1621 tcacactacg gagtcgatgg ttcagtttca tgaacccttg gaccaaggaa gtagaatata 1681 ttgtctcaac taacactgtt gttttagcca acgtcctgga aggcggggac ccaaccttcc 1741 cacagctcac agcatccccc cacagcatgg acagcatgct gccctctgga gaaggtggcc 1801 caaagaggac ccaccccact gttccaggga ttccaggggg aacccgggct ggggcaggaa 1861 aaataggccg aatgattgct gaggaaatca tggaaatcca caggataaga gggtcatcgc 1921 cttctagctg tggctccagc ccattgaaca tcacgagtac gcctccccct gatgcctctt 1981 ctccaggagg caagaagatt ttaaatggag ggactccaga cattccttcc agtggcctac 2041 tatcaggcca ggctcaggag aacccaggtt atccatattc tgatagttct tctattcttg 2101 gtgagaaccc ccacataggt atagacatga ttgacaacga ccaaggatca agtagtccca 2161 gtaatgatga ggcagcaatg gctgtcatca tgagcctctt ggaagcagat gctggactgg 2221 gtggccctgt tgactttagt gacttgccat ggccgctgta aacactacat gttgctttgg 2281 caacagctat agtatcaaag tgcattactg gtggagtttt acagtctgtg aagcttactg 2341 gataaggaga gaatagcttt tatgtactga cttcataaaa gccatctcag agccattgat 2401 acaagtcaat cttactatat gtaacttcag acaaagtgga actaagcctg ctccagtgtt 2461 tcctcatcat tgattattgg gctagctgtg gatagcttgc attaattgta tattttggat 2521 tctgtttgtg ttgaattttt taatcattgt gcacagaagc atcattggta gcttttatat 2581 gcaaatggtc atttcagatg tatggtgttt ttacactaca aagaagtccc ccatgtggat 2641 atttcttata ctaattgtat cataaagccg tttattcttc cttgtaagaa tcctttacta 2701 taaatatggg ttaaagtata atgtactaga cagttaaata tttttaataa atgtttccct 2761 tgttctataa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2821 aaaa //