LOCUS BC041124 3564 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens neutral sphingomyelinase (N-SMase) activation associated factor, mRNA (cDNA clone MGC:47757 IMAGE:5785460), complete cds. ACCESSION BC041124 VERSION BC041124.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3564) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3564) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: m Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31543296. FEATURES Location/Qualifiers source 1..3564 /db_xref="H-InvDB:HIT000052512" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47757 IMAGE:5785460" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3564 /gene="NSMAF" /gene_synonym="FAN" /db_xref="GeneID:8439" /db_xref="HGNC:HGNC:8017" /db_xref="MIM:603043" CDS 197..2950 /gene="NSMAF" /gene_synonym="FAN" /codon_start=1 /product="neutral sphingomyelinase (N-SMase) activation associated factor" /protein_id="AAH41124.1" /db_xref="GeneID:8439" /db_xref="HGNC:HGNC:8017" /db_xref="MIM:603043" /translation="MAFIRKKQQEQQLQLYSKERFSLLLLNLEEYYFEQHRANHILHK GSHHERKIRGSLKICSKSVIFEPDSISQPIIKIPLRDCIKIGKHGENGANRHFTKAKS GGISLIFSQVYFIKEHNVVAPYKIERGKMEYVFELDVPGKVEDVVETLLQLHRASCLD KLGDQTAMITAILQSRLARTSFDKNRFQNISEKLHMECKAEMVTPLVTNPGHVCITDT NLYFQPLNGYPKPVVQITLQDVRRIYKRRHGLMPLGLEVFCTEDDLCSDIYLKFYEPQ DRDDLYFYIATYLEHHVAEHTAESYMLQWQRGHLSNYQYLLHLNNLADRSCNDLSQYP VFPWIIHDYSSSELDLSNPGTFRDLSKPVGALNKERLERLLTRYQEMPEPKFMYGSHY SSPGYVLFYLVRIAPEYMLCLQNGRFDNADRMFNSIAETWKNCLDGATDFKELIPEFY GDDVSFLVNSLKLDLGKRQGGQMVDDVELPPWASSPEDFLQKSKDALESNYVSEHLHE WIDLIFGYKQKGSDAVGAHNVFHPLTYEGGVDLNSIQDPDEKVAMLTQILEFGQTPKQ LFVTPHPRRITPKFKSLSQTSSYNASMADSPGEESFEDLTEESKTLAWNNITKLQLHE HYKIHKEAVTGITVSRNGSSVFTTSQDSTLKMFSKESKMLQRSISFSNMALSSCLLLP GDATVITSSWDNNVYFYSIAFGRRQDTLMGHDDAVSKICWHDNRLYSASWDSTVKVWS GVPAEMPGTKRHHFDLLAELEHDVSVDTISLNAASTLLVSGTKEGTVNIWDLTTATLM HQIPCHSGIVCDTAFSPDSRHVLSTGTDGCLNVIDVQTGMLISSMTSDEPQRCFVWDG NSVLSGSQSGELLVWDLLGAKISERIQGHTGAVTCIWMNEQCSSIITGGEDRQIIFWK LQY" BASE COUNT 1036 a 781 c 811 g 936 t ORIGIN 1 ggatgctgcg gtgagcgcgg ccgggacgcc gcgtcgggct ctcggccgcc cagcggcgcc 61 gcaggggaag ccaggccggc agccgcgcgc tccccagccg gccaccaatc ccgccctccc 121 cggctcctcc ggacctcctc ggcaggcggc ggcggggcct gcctgtgcgc tctgcgcccg 181 cccgcgccta ccctccatgg cgtttatccg gaagaagcag caggagcagc agctgcagct 241 ctactccaag gagagatttt ccttgctgct gcttaacttg gaggagtact actttgaaca 301 gcatagagcc aatcacattt tgcacaaggg cagtcaccat gaaaggaaaa tcagaggctc 361 cttaaaaata tgttcaaaat cggtgatttt tgaaccagat tcaatatccc agcccatcat 421 caagattcct ttgagagact gtataaaaat aggaaagcat ggagaaaatg gagccaatag 481 acacttcaca aaggcaaaat ctgggggtat ttcactcatt ttcagtcagg tatatttcat 541 taaagaacat aatgttgttg caccatataa aatagaaagg ggcaaaatgg aatatgtttt 601 tgaattggat gttcccggga aagtggaaga tgttgtggag acgttgcttc agcttcacag 661 agcatcctgc cttgacaaat tgggtgacca aaccgccatg ataacagcta ttttgcagtc 721 tcgtttagct agaacatcat ttgacaaaaa caggttccaa aacatttctg aaaagctgca 781 catggaatgc aaagcagaaa tggtgacgcc tctggtgact aatcctggac acgtgtgcat 841 cacggacaca aacctgtatt ttcagcccct caacggctac ccgaaacctg tggtccagat 901 aacactccaa gatgtccgcc gcatctacaa aaggaggcac ggcctcatgc ctctgggctt 961 ggaagtattt tgcacagaag atgatctgtg ttccgacatc tacctaaagt tctatgaacc 1021 tcaagataga gatgatctct atttttacat tgccacatac ctagagcacc atgtggcgga 1081 gcacactgct gagagctaca tgctgcagtg gcagcgtgga cacctttcca actatcagta 1141 cctccttcac ctcaacaacc tggccgaccg cagctgcaac gacctctccc agtaccctgt 1201 gtttccatgg ataatacatg attattccag ctcagaacta gatttgtcaa atccaggaac 1261 cttccgggat ctcagtaagc cagtaggggc cctaaataag gaacggctgg agagactact 1321 gacacgctac caggaaatgc ctgaaccaaa gttcatgtat gggagtcact actcttcccc 1381 gggttatgta cttttttatc ttgttaggat tgcaccagag tatatgctgt gcctgcagaa 1441 tggaagattt gataatgcag atagaatgtt caacagtatt gcagaaactt ggaaaaactg 1501 tctggatggt gcaacggatt ttaaagagtt aattccagaa ttctatggtg atgatgtgag 1561 ctttctagtc aatagcctga agttggattt gggaaagaga caaggaggac agatggttga 1621 cgatgtggag cttccccctt gggcttccag tcccgaggac tttctccaga agagcaaaga 1681 tgcattggaa agcaattatg tgtctgaaca ccttcacgag tggattgatc taatatttgg 1741 ctacaaacaa aaagggagtg atgcagttgg ggcccataat gtatttcatc ccctgaccta 1801 tgaaggaggt gtagacttga acagcatcca ggatcctgat gagaaggtag ccatgcttac 1861 gcaaatcttg gaatttgggc agacaccaaa acaactattt gtgacaccac atcctcgaag 1921 gatcacccca aagtttaaaa gtttgtccca gacctccagt tataatgctt ctatggcaga 1981 ttccccaggt gaagagtctt ttgaagacct gaccgaagaa agcaaaacac tggcctggaa 2041 taacatcacc aaactgcagt tacacgagca ctataaaatc cacaaagaag cagttactgg 2101 aatcacggtc tctcgcaatg gatcttcagt attcacaaca tcccaagatt ccaccttgaa 2161 gatgttttct aaagaatcaa aaatgctaca aagaagtata tcattttcaa atatggcttt 2221 atcgtcttgt ttacttttac caggagatgc cactgtcata acttcttcat gggataataa 2281 tgtctatttt tattccatag catttggaag acgccaggac acgttaatgg gacatgatga 2341 tgctgttagt aagatctgtt ggcatgacaa caggctatat tctgcatcgt gggactctac 2401 agtgaaggtg tggtctggtg ttcctgcaga gatgccaggc accaaaagac accactttga 2461 cttgctggcc gagctggaac atgatgtcag tgtagataca atcagtttaa atgctgcaag 2521 cacactgtta gtttccggca ccaaagaagg cacagtgaat atttgggacc tcacaacggc 2581 caccttaatg caccagattc catgccattc agggattgta tgtgacactg cttttagccc 2641 agatagtcgc catgtcctca gcacaggaac agatggctgt cttaatgtca ttgatgtgca 2701 gacaggaatg ctcatctcct ccatgacatc agatgagccc cagaggtgct ttgtctggga 2761 tggaaattcc gttttatctg gcagtcagtc tggtgaactg ctcgtttggg acctccttgg 2821 agcaaaaatc agtgagagaa tacagggcca cacaggtgct gtgacatgta tatggatgaa 2881 tgaacagtgt agcagtatca tcacaggagg ggaagacaga caaattatat tctggaaatt 2941 gcagtattaa gtgccttttc ctctcctgaa tattaaattg aactctattt aatgcatttt 3001 taaaccaaac ttttaaacgg actggtgaat gtgcaatgtt agtaattaga agttttacca 3061 catggaaaat ttgtggtttt aaactttcta aatcatggtg acttcattga aagccattag 3121 ttgctattct cttagggcag ataaaatgcg gctgtgttag gaaaaacatg ttacactgta 3181 aggcagatga tcgtccccgt atgatgattg tcagaagaca ggactaagta gcagagaata 3241 gctaagagat aaattgggct ggggaaactt gtcagaaagc actgaacaat taagaaattt 3301 tccaagaaaa tgtgcagtat tctctgctac ttctgaatct gttttgtctt cctaatctat 3361 cacaattgcc acccatcggg ttttgggtgt gtgttttcat agcgtggtta ctttctataa 3421 tgctgtaccc agattctaag aacctggaga aggattagca gttcttagta agtttactgt 3481 gtataggaac ggtttgtatt tcattacagc tattcatctt ttctacatta aaaatatttt 3541 tctctaaaga aaaaaaaaaa aaaa //