LOCUS BC041114 2744 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens ras homolog gene family, member T1, mRNA (cDNA clone IMAGE:4154350), partial cds. ACCESSION BC041114 VERSION BC041114.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2744) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2744) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: a Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361737. FEATURES Location/Qualifiers source 1..2744 /db_xref="H-InvDB:HIT000096585" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4154350" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2744 /gene="RHOT1" /gene_synonym="FLJ11040" /gene_synonym="MIRO-1" /db_xref="GeneID:55288" /db_xref="HGNC:HGNC:21168" CDS <1..2030 /gene="RHOT1" /gene_synonym="FLJ11040" /gene_synonym="MIRO-1" /codon_start=3 /product="RHOT1 protein" /protein_id="AAH41114.1" /db_xref="GeneID:55288" /db_xref="HGNC:HGNC:21168" /translation="RRSWRCPGSLAGKQLRGRRGGPRRPKRLAGGAVGWVLLVRGVHS VRAGGGRPPRAADMKKDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPAD VTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINE RTDKDSRLPLILVGNKSDLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYY AQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNT PLAPQALEDVKNVVRKHISDGVADSGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYD DDLDLTPEYLFPLLKIPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFKV FPYIPWGPDVNNTVCTNERGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQE SQASAVTVTRDKKIDLQKKQTQRNVFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIRE DHKSYYAINTVYVYGQEKYLLLHDISESEFLTEAEIICDVVCLVYDVSNPKSFEYCAR IFKQHFMDSRIPCLIVAAKSDLHEVKQEYSISPTDFCRKHKMPPPQAFTCNTADAPSK DIFVKLTTMAMYPHVTQADLKSSTFWLRASFGATVFAVLGFAMYKALLKQR" BASE COUNT 832 a 529 c 603 g 780 t ORIGIN 1 ggaggcggag ctggcgctgt cccggctctc ttgcggggaa gcaactgagg gggcggcgcg 61 gcgggccccg gcggccgaag aggctggcag gtggcgccgt ggggtgggtg ctcctggtga 121 gaggagtcca ctccgtgcgt gcgggcggag gccggccccc gagagccgcc gacatgaaga 181 aagacgtgcg gatcctgctg gtgggagaac ctagagttgg gaagacatca ctgattatgt 241 ctctggtcag tgaagaattt ccagaagagg ttcctccccg ggcagaagaa atcaccattc 301 cagctgatgt caccccagag agagttccaa cacacattgt agattactca gaagcagaac 361 agagtgatga acaacttcat caagaaatat ctcaggctaa tgtcatctgt atagtgtatg 421 ccgttaacaa caagcattct attgataagg taacaagtcg atggattcct ctcataaatg 481 aaagaacaga caaagacagc aggctgcctt taatattggt tgggaacaaa tctgatctgg 541 tggaatatag tagtatggag accatccttc ctattatgaa ccagtataca gaaatagaaa 601 cctgtgtgga gtgttcagcg aaaaacctga agaacatatc agagctcttt tattacgcac 661 agaaagctgt tcttcatcct acagggcccc tgtactgccc agaggagaag gagatgaaac 721 cagcttgtat aaaagccctt actcgtatat ttaaaatatc tgatcaagat aatgatggta 781 ctctcaatga tgctgaactc aacttctttc agaggatttg tttcaacact ccattagctc 841 ctcaagctct ggaggatgtc aagaatgtag tcagaaaaca tataagtgat ggtgtggctg 901 acagtgggtt gaccctgaaa ggttttctct ttttacacac actttttatc cagagaggga 961 gacacgaaac tacttggact gtgcttcgac gatttggtta tgatgatgac ctggatttga 1021 cacctgaata tttgttcccc ctgctgaaaa tacctcctga ttgcactact gaattaaatc 1081 atcatgcata tttatttctc caaagcacct ttgacaagca tgatttggat agagactgtg 1141 ctttgtcacc tgatgagctt aaagatttat ttaaagtttt cccttacata ccttgggggc 1201 cagatgtgaa taacacagtt tgtaccaatg aaagaggctg gataacctac cagggattcc 1261 tttcccagtg gacgctcacg acttatttag atgtacagcg gtgcctggaa tatttgggct 1321 atctaggcta ttcaatattg actgagcaag agtctcaagc ttcagctgtt acagtgacaa 1381 gagataaaaa gatagacctg cagaaaaaac aaactcaaag aaatgtgttc agatgtaatg 1441 taattggagt gaaaaactgt gggaaaagtg gagttcttca ggctcttctt ggaagaaact 1501 taatgaggca gaagaaaatt cgtgaagatc ataaatccta ctatgcgatt aacactgttt 1561 atgtatatgg acaagagaaa tacttgttgt tgcatgatat ctcagaatcg gaatttctaa 1621 ctgaagctga aatcatttgt gatgttgtat gcctggtata tgatgtcagc aatcccaaat 1681 cctttgaata ctgtgccagg atttttaagc aacactttat ggacagcaga ataccttgct 1741 taatcgtagc tgcaaagtca gacctgcatg aagttaaaca agaatacagt atttcaccta 1801 ctgatttctg caggaaacac aaaatgcctc caccacaagc cttcacttgc aatactgctg 1861 atgcccccag taaggatatc tttgttaaat tgacaacaat ggccatgtat ccgcacgtga 1921 cacaagctga cctcaagagc tccacgtttt ggcttcgagc aagttttggt gctactgttt 1981 ttgcagtttt gggctttgct atgtacaaag cattattgaa acagcgatga tataaaaaga 2041 aatactgtcc ctaccaaaaa caaatacttt tatgtacatt ctgaatgctt taagttctgc 2101 tagaattatt gagatattta tacatgcaga gttactttat taatatttgt aattcatgca 2161 taagagtatt ttaatgatag ttataactgc agtattggct agcatatgga aagaaaacag 2221 ctaacagcca aactaaaatg gctaaattcc agaggccaaa agggaatatt ttgtaaatat 2281 atgtacatat tcaggcaaga tatggtctcc caagctgagt tctagaaatg atgtttctag 2341 acatttctaa gtggtattgt tagtgctcac ttggctcact cttctaggtt taagttagcc 2401 cagagattgt atttactcat ggatcacttt atttatttca catttactca gaatgatcct 2461 ttgggttcta taaggacata aggtacaatt tgccattgtc tctccatttt taaaaacata 2521 caagtcagtg tcagcttacc aacatgacat tttttcagtc agttgtggta ggccagcctt 2581 gaagccatcg cacagtctag aaacttgtgt agctgagtgt gcagctcacc tttaagggtg 2641 aagttaggta aaagcaatta gcagaggcgt tatctatgtg attatgttgc ttccttgtca 2701 gtatgttgaa ttttatagcc ctttcaatga aaaaaaaaaa aaaa //