LOCUS BC041090 1857 bp mRNA linear HUM 17-JUL-2007
DEFINITION Homo sapiens NK2 homeobox 8, mRNA (cDNA clone MGC:46102
IMAGE:5752253), complete cds.
ACCESSION BC041090
VERSION BC041090.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1857)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1857)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: m Column: 23.
FEATURES Location/Qualifiers
source 1..1857
/db_xref="H-InvDB:HIT000052498"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46102 IMAGE:5752253"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1857
/gene="NKX2-8"
/gene_synonym="Nkx2-9"
/gene_synonym="NKX2.8"
/db_xref="GeneID:26257"
/db_xref="HGNC:HGNC:16364"
/db_xref="MIM:603245"
CDS 193..912
/gene="NKX2-8"
/gene_synonym="Nkx2-9"
/gene_synonym="NKX2.8"
/codon_start=1
/product="NK2 homeobox 8"
/protein_id="AAH41090.1"
/db_xref="GeneID:26257"
/db_xref="HGNC:HGNC:16364"
/db_xref="MIM:603245"
/translation="MATSGRLSFTVRSLLDLPEQDAQHLPRREPEPRAPQPDPCAAWL
DSERGHYPSSDESSLETSPPDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELERR
FRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAELH
AAPGLLRRVVVPVLVRDGQPCGGGGGGEVGTAAAQEKCGAPPAAACPLPGYPAFGPGS
ALGLFPAYQHLASPALVSWNW"
BASE COUNT 359 a 597 c 581 g 320 t
ORIGIN
1 ccggacctcg gctttcaaag cggcctgggt gggaagagct gtttatataa acagagattc
61 cgctgtaaat gcgctaatat cccggctgcc agcgcatggc gagcgcctcc cacgcccatc
121 cgtaggagcg gcgtcccggc cgcccctccg ttcccagcct gccctgcccc cgcctccttc
181 ccctcctcgg ccatggccac ctctggacgc ctgagcttca ccgtgcgcag ccttctagat
241 ttacccgagc aggacgcgca acacctgccg aggcgggagc cagaaccacg cgccccccag
301 cccgacccct gcgccgcctg gctggattcg gagcgcggcc actacccttc ctcggacgag
361 agcagcctgg agaccagccc gccagactcg tcgcagcggc cgtccgctag gcccgcgtct
421 ccgggctcgg acgccgagaa aaggaagaag cggcgggtgc tattctccaa ggcgcagacg
481 ctggagttgg agcggcgctt ccggcagcag cggtacctgt ctgcgcccga gcgcgagcag
541 ctggcgagcc tgcttcgcct cacgcccacg caggtcaaga tctggttcca gaatcatcgc
601 tacaagctga agcgcgctcg cgctccaggg gcggcggagt cgcctgacct ggcagcatcc
661 gccgagctgc acgccgcgcc cggcctgctg cgtcgcgtgg tggtgccggt gcttgttcgc
721 gacgggcagc cgtgcggcgg cggcggcggt ggcgaggtgg gaaccgccgc ggcccaggag
781 aagtgcggcg cccctccagc cgccgcctgc cctctgccgg gctaccctgc cttcggtccc
841 ggctcggcgc ttggcctctt ccccgcctac cagcacttag catcccccgc cctggtctcc
901 tggaactggt gaggccgcag ggcggcacct ggggctaccc tcgactttgg agcgcgctct
961 gcgattggag cagggccgga gccgaacgcc tggaacgctc tccgtccgcc tccctgcagc
1021 cccatctcct tgggcgccag ggtccctggc gcgccctcat cagccgtcgc gcaagcacac
1081 acgagggacg tgtgccagag ccccctccct caccttccct ccaccgccag ccccagagtt
1141 agattttatg cttgggcctt atttgtatat ttttaaatag cgatttgtat aggaagcaag
1201 ttattttttt aaaaaataga gtatttttcc tcgtagttcg agaataaaat gtgtggggtt
1261 gggtcccctg cgcgcctgcg gggaacgtag gcgggagtcg tgccccccag accggtgttc
1321 gcatcgctgg ctcgcccctt gactggctaa gtggggcccg gccccagctg gatcgaaggg
1381 cgggttgcag tcccgacacg gctttaggaa gatacctggg ggatggaggg gtggtgatgt
1441 cagggttggg cgcgggaaga aaaggagagg aggaagctga ggcaactttg ggattcttgt
1501 cagcgggagg cgtcactggc cccagagtga ctccgactct ccgctgggct cccagagctg
1561 ctggcgtttc gaataccgaa aagtcaaccc tgtggaccac gacagggcag aaggagtttc
1621 tccggagatg agccggcgag gccaggtgcg gggcgcgctg caccggagca gcccaggccg
1681 ggccgcaagc tgtttccaga gtgcaggagc caagtgctcg gggacccttt gaaaagtgcc
1741 tggggacctg aagagcaccg gggaatttgt aacccctatt taagcctgca agtgcctaag
1801 ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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