LOCUS BC041029 1041 bp mRNA linear HTC 18-MAR-2009 DEFINITION Homo sapiens family with sequence similarity 13, member A, mRNA (cDNA clone IMAGE:4121917), with apparent retained intron. ACCESSION BC041029 VERSION BC041029.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1041) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1041) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 44 Row: c Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 56119109 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1041 /db_xref="H-InvDB:HIT000096539" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4121917" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" BASE COUNT 295 a 198 c 244 g 304 t ORIGIN 1 ggaaagagaa gcaaaaccac tcttcctaaa atgttagaag ctgctcttcg cttaccttgg 61 ggcctttgca ttgggagctg tttttcacat caaagaatat gtgctgaatg gaattttagt 121 attttgctgt cgttttaata ttttcgtctg gtcttcctca gttcttccag acgctttctg 181 agagaatggg ggcaggagct ctagccatct gtcaaagtaa agcagcggtt cggctgaaag 241 aagacatgaa aaagatagtg gcagtgccat taaatgaaca gaaggatttt acctatcaga 301 agttatttgg agtcagtctc caagaacttg aacggcaggg gctcaccgag aatggcattc 361 cagcagtagt gtggaatata gtggaatatt tgacgcagca tggacttacc caagaaggtc 421 tttttagggt gaatggtaac gtgaaggtgg tggaacaact tcgactgaag ttcgagagtg 481 gagtgcccgt ggagctcggg aaggacggtg atgtctgctc agcagccagt ctgttgaagc 541 tgtttctgag ggagctgcct gacagtctga tcacctcagc gttgcagcct cgattcattc 601 aactctttca ggatggcaga aatgatgttc aggagagtag cttaagagac ttaataaaag 661 agctgccaga cacccactac tgcctcctca agtacctttg ccagttcttg acaaaagtag 721 ccaagcatca tgtgcagaat cgcatgaatg ttcacaatct cgccactgta tttgggccaa 781 attgctttca gtaagttagt ggagttttac tgttaatatc atcatgtccc cctttgtgtt 841 tactactgtc tgaaattact gggatgtaga agcatatttc agtctgaaaa ttcagccagc 901 ttattttgga gaagttgtat cttgttcttg ggcatgttag ccttgttttt catcccaatt 961 tgaagaaggt agctatgccc tttttacaaa actataattt gcaataaatc aaatagcctt 1021 atttaaaaaa aaaaaaaaaa a //