LOCUS BC040949 3210 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens myocyte enhancer factor 2D, mRNA (cDNA clone MGC:48824
IMAGE:6044434), complete cds.
ACCESSION BC040949
VERSION BC040949.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3210)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3210)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: n Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254821.
FEATURES Location/Qualifiers
source 1..3210
/db_xref="H-InvDB:HIT000052467"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48824 IMAGE:6044434"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3210
/gene="MEF2D"
/db_xref="GeneID:4209"
/db_xref="HGNC:HGNC:6997"
/db_xref="MIM:600663"
CDS 215..1759
/gene="MEF2D"
/codon_start=1
/product="MEF2D protein"
/protein_id="AAH40949.1"
/db_xref="GeneID:4209"
/db_xref="HGNC:HGNC:6997"
/db_xref="MIM:600663"
/translation="MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIA
LIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPD
GEDSLEQSPLLEDKYRRASEELDGLFRRYGSTVPAPNFAMPVTVPVSNQSSLQFSNPS
GSLVTPSLVTSSLTDPRLLSPQQPALQRNSVSPGLPQRPASAGAMLGGDLNSANGACP
SPVGNGYVSARASPGLLPVANGNSLNKVIPAKSPPPPTHSTQLGAPSRKPDLRVITSQ
AGKGLMHHLNNAQRLGVSQSTHSLTTPVVSVATPSLLSQGLPFSSMPTAYNTDYQLTS
AELSSLPAFSSPGGLSLGNVTAWQQPQQPQQPQQPQPPQQQPPQPQQPQPQQPQQPQQ
PPQQQSHLVPVSLSNLIPGSPLPHVGAALTVTTHPHISIKSEPVSPSRERSPAPPPPA
VFPAARPEPGDGLSSPAGGSYETGDRDDGRGDFGPTLGLLRPAPEPEAEGSAVKRMRL
DTWTLK"
BASE COUNT 681 a 1021 c 851 g 657 t
ORIGIN
1 ggggcctgag accacccctg ccctaggccc agctttcctg gactgcctgc ccccacaaac
61 caacagcccg cccccaggtc ccctgtcgaa ggtatcctgc agaccatgaa ctgagcactg
121 ttcccagacc gttcatgagc acagtgtaag gtgtgccgag acccaccacc cagcgagccc
181 ctcccctccg tagcactgag gacccccgga gaagatgggg aggaaaaaga ttcagatcca
241 gcgaatcacc gacgagcgga accgacaggt gactttcacc aagcggaagt ttggcctgat
301 gaagaaggcg tatgagctga gcgtgctatg tgactgcgag atcgcactca tcatcttcaa
361 ccactccaac aagctgttcc agtacgccag caccgacatg gacaaggtgc tgctcaagta
421 cacggagtac aatgagccac acgagagccg caccaacgcc gacatcatcg agaccctgag
481 gaagaagggc ttcaatggct gcgacagccc cgagcccgac ggggaggact cgctggaaca
541 gagccccctg ctggaggaca agtaccgacg cgccagcgag gagctcgacg ggctcttccg
601 gcgctatggg tcaactgtcc cggcccccaa ctttgccatg cctgtcacgg tgcccgtgtc
661 caatcagagc tcactgcagt tcagcaatcc cagcggctcc ctggtcaccc cttccctggt
721 gacatcatcc ctcacggacc cgcggctcct gtccccccag cagccagcac tacagaggaa
781 cagtgtgtct cctggcctgc cccagcggcc agctagtgcg ggggccatgc tggggggtga
841 cctgaacagt gctaacggag cctgccccag ccctgttggg aatggctacg tcagtgctcg
901 ggcttcccct ggcctcctcc ctgtggccaa tggcaacagc ctaaacaagg tcatccctgc
961 caagtctccg cccccaccta cccacagcac ccagcttgga gcccccagcc gcaagcccga
1021 cctgcgagtc atcacttccc aggcaggaaa ggggttaatg catcacttga acaatgccca
1081 gcgccttggg gtctcccagt ctactcattc gctcaccacc ccagtggttt ctgtggcaac
1141 gccgagttta ctcagccagg gcctcccctt ctcttccatg cccactgcct acaacacaga
1201 ttaccagttg accagtgcag agctctcctc cttaccagcc tttagttcac ctggggggct
1261 gtcgctaggc aatgtcactg cctggcaaca gccacagcag ccccagcagc cgcagcagcc
1321 acagcctcca cagcagcagc caccgcagcc acagcagcca cagccacagc agcctcagca
1381 gccgcaacag ccacctcagc aacagtccca cctggtccct gtatctctca gcaacctcat
1441 cccgggcagc cccctgcccc acgtgggtgc tgccctcaca gtcaccaccc acccccacat
1501 cagcatcaag tcagaaccgg tgtccccaag ccgtgagcgc agccctgcgc ctccccctcc
1561 agctgtgttc ccagctgccc gccctgagcc tggcgatggt ctcagcagcc cagccggggg
1621 atcctatgag acgggagacc gggatgacgg acggggggac ttcgggccca cactgggcct
1681 gctgcgccca gccccagagc ctgaggctga gggctcagct gtgaagagga tgcggcttga
1741 tacctggaca ttaaagtgac gattcccact cccctcctct cagcctccct gatgaagagt
1801 tgacaatctc accgcccgcc cttccctgcc ccgggctcct cccgctcgac ccccacttcc
1861 tttcttgtgc ttcgtgtcct gttgacggtt acatttgtgt ataattatta tattattatt
1921 attattatta tatttttttt aatttggatt ctcgctttgg agagggggat gctctcatcc
1981 cctctttctg taccccccac cattttcact ggctgggggg ctctcttttt cgcgggaagg
2041 ggggacactt tgcacgttgt acacatatgc tgcaggaagg gggtgggggg cccaataagg
2101 cctttgggaa aggacaggtg ccgagccctg catgtggagc cctcccaccc cacccccaga
2161 tagagggaaa taaccaaaaa actaccaaac aacagaaacc cacactctag actgaaaccc
2221 caaagtgggc ttgatgggtg ggtttgtgtt tcaaggggaa agtgaggcag aggttctgaa
2281 aagggtctct gtttttgtgt tcatgtagcc ataggcacat ggagcagaat acttaagcct
2341 ggcccccaaa tgcccctgca cacacacgtg ccacacctgc gctgattctt gtgtgtgctg
2401 cacccccaag gtgtgtgggt gctggctgag ctttgggccg ggaaggcagc ctgggaatct
2461 gaggctggag acaggggttt gaggtggggg cctctctgga agcacatttg gagggaaaga
2521 caagagagcc atgaggagag ggctgaggag ggcagaaggg ctaggcaggg ggcaaattga
2581 gcccctccct tccccagttt ttctctaaga tatacagtgc aatagctccc cacccctcag
2641 ttgacgccag ccctgtaaag ctggccacag tgtgcaggga gaatggggag agggtcttca
2701 gtgaggtggc tggggcgaga gtcggcctgg acttccctgg ggtgctccag gccagagctc
2761 tttcattggg gcgagtgtgg tgaggggacg tccttggtct tgcacgcaca ctacctgggg
2821 gagtcaacac tgggatggtc tgtggggtgg gagggcctac ggatgggtcc gtagaggtcc
2881 cacctccctc attcctcctt ggcccctctc cctagcttct cctgttagct ccttctgctc
2941 ctgaccccac ctccttgctc ttggcgcccc tattgtctct ggctacctcc ttgtcccacc
3001 acctccaggc tgcatcccac cttccctctt ggctactgta attgtaaata gcgacctttg
3061 gaaaacgtta gcggtgtaac agtccaggaa actgtttttt tttgttgttg ttgtattgat
3121 atgaaatgag attctatttt tgtcaaagta tattgtaata ataatgactc aaacggcccg
3181 tactgtacag acgaaaaaaa aaaaaaaaaa
//