LOCUS BC040903 1332 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens leucine rich repeat containing 16A, mRNA (cDNA clone
IMAGE:5744007), partial cds.
ACCESSION BC040903
VERSION BC040903.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1332)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1332)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 88 Row: l Column: 4.
FEATURES Location/Qualifiers
source 1..1332
/db_xref="H-InvDB:HIT000096439"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5744007"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1332
/gene="LRRC16A"
/gene_synonym="dJ501N12.1"
/gene_synonym="dJ501N12.5"
/db_xref="GeneID:55604"
/db_xref="HGNC:HGNC:21581"
CDS <1..962
/gene="LRRC16A"
/gene_synonym="dJ501N12.1"
/gene_synonym="dJ501N12.5"
/codon_start=3
/product="LRRC16A protein"
/protein_id="AAH40903.1"
/db_xref="GeneID:55604"
/db_xref="HGNC:HGNC:21581"
/translation="LRFGREAARRGAVPAAATAAPHSVSPGGATYAGDPALGHRRPAS
HRCGGRLSRESIKDVIGRKIKISVKKKVKLEVKGDKVENKVLVLTSCRAFLVTARIPT
KLELTFSYLEIHGVVCSKSAQMIVETEKCSISMKMASPEDVSEVLAHIGTCLRKIFPG
LSPVRIMKKVSMEPSERLASLQALWDSQTVAEQGPCGGFSQMYACVCDWLGFSYREEV
QWDVDTIYLTQDTRELNLQDFSHLDHRKSRIAVWSLKSSSQLNRPGKKYTSWIYLLFA
QPGTTEDGEAGSAVSVVVADGPKASSSQAIFFFSCLEQFSFFL"
BASE COUNT 401 a 268 c 327 g 336 t
ORIGIN
1 ttttgcggtt tgggagggag gctgcgagga ggggcgcggt gcccgccgcc gccaccgcag
61 caccgcacag cgtctctcct gggggtgcga cctacgccgg ggacccagcg ctcgggcacc
121 ggaggccggc ctcgcaccgg tgcggaggcc ggctctcgcg agaaagcata aaggatgtta
181 ttggcagaaa gataaaaatt tcagtgaaga agaaagtaaa gttggaagtt aagggagaca
241 aagttgaaaa caaagtgctg gtgcttacat catgccgagc cttccttgta acagcgcgaa
301 tccccaccaa gctcgagtta accttcagct acttggagat tcatggcgtc gtttgcagca
361 agtcagctca gatgattgtg gaaactgaga agtgcagcat ttccatgaag atggcgtcac
421 ccgaggacgt gagtgaggtg ctggctcaca taggcacctg cctgaggaag atatttcctg
481 gcctctctcc agtgagaatc atgaaaaaag tctccatgga gccatctgag cgcctggcta
541 gtctccaggc gctgtgggac agccagaccg tggctgagca gggcccctgt ggtggatttt
601 ctcagatgta tgcctgtgtt tgtgactggc ttggattttc atacagggaa gaagtacaat
661 gggatgtgga tacaatttat cttacccaag acaccaggga attgaattta caagatttta
721 gtcatcttga ccacaggaaa tccagaattg cagtgtggtc cctgaagagc tctagccaac
781 tgaatcggcc agggaaaaag tatactagct ggatatacct cctctttgca cagcctggga
841 ctacggaaga tggtgaagca ggctcagctg tgtctgtagt tgtggctgat gggcctaaag
901 cctccagttc tcaggcaatt tttttttttt cctgcttaga gcagttctcc ttcttcctat
961 aagtgaggca actttatact ttcaaattta gacaagatgt ttcctgtgta gctcataaaa
1021 aagtgaactg agaaagaaaa agggaaaata ttttactttg taagtatttt ccaataaaac
1081 aagaaaattg cacgtggaat aagatagaag tttacagtcc tccagtgttt ggtctcagcg
1141 tttttggtcc ctttacaatc ttaaaaatga tcgatctttg gtttttgtgg gtcaaaacat
1201 tggtatttac aatattataa attaaaacta aaatttgaaa tatttattaa ttaaaaagtg
1261 acactaataa agcaaaccat tacgtactaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaaaa aa
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