LOCUS BC040852 2249 bp mRNA linear HTC 09-JUN-2008
DEFINITION Homo sapiens H19, imprinted maternally expressed transcript
(non-protein coding), mRNA (cDNA clone IMAGE:3454196), with
apparent retained intron.
ACCESSION BC040852
VERSION BC040852.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2249)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2249)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 88 Row: a Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2249
/db_xref="H-InvDB:HIT000096394"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3454196"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 455 a 639 c 776 g 379 t
ORIGIN
1 atggggtgct ggaggagagc ttgtgggagc caaggagcac cttggacatc tggagtctgg
61 caggagtgat gacgggtgga ggggctagct cgaggcaggg ctggtggggc ctgaggccag
121 tgaggagtgt ggagtaggcg cccaggcatc gtgcagacag ggcgacatca gctggggacg
181 atgggcctga gctagggctg gaaagaaggg ggagccaggc attcatcccg gtcacttttg
241 gttacaggac gtggcagctg gttggacgag gggagctggt gggcagggtt tgatcccagg
301 gcctgggcaa cggaggtgta gctggcagca gcgggcaggt gaggacccca tctgccgggc
361 aggtgagtcc cttccctccc caggcctcgc ttccccagcc ttctgaaaga aggaggttta
421 ggggatcgag ggctggcggg gagaagcaga caccctccca gcagaggggc aggatggggg
481 caggagagtt agcaaaggtg acatcttctc ggggggagcc gagactgcgc aaggctgggg
541 ggttatgggc ccgttccagg cagaaagagc aagagggcag ggagggagca caggggtggc
601 cagcgtaggg tccagcacgt ggggtggtac cccaggcctg ggtcagacag ggacatggca
661 ggggacacag gacagagggg tccccagctg ccacctcacc caccgcaatt catttagtag
721 caggcacagg ggcagctccg gcacggcttt ctcaggccta tgccggagcc tcgagggctg
781 gagagcggga agacaggcag tgctcgggga gttgcagcag gacgtcacca ggagggcgaa
841 gcggccacgg gaggggggcc ccgggacatt gcgcagcaag gaggctgcag gggctcggcc
901 tgcgggcgcc ggtcccacga ggcactgcgg cccagggtct ggtgcggaga gggcccacag
961 tggacttggt gacgctgtat gccctcaccg ctcagcccct ggggctggct tggcagacag
1021 tacagcatcc aggggagtca agggcatggg gcgagaccag actaggcgag gcgggcgggg
1081 cggagtgaat gagctctcag gagggaggat ggtgcaggca ggggtgagga gcgcagcggg
1141 cggcgagcgg gaggcactgg cctccagagc ccgtggccaa ggcgggcctc gcgggcggcg
1201 acggagccgg gatcggtgcc tcagcgttcg ggctggagac gaggccaggt ctccagctgg
1261 ggtggacgtg cccaccagct gccgaaggcc aagacgccag gtccggtgga cgtgacaagc
1321 aggacatgac atggtccggt gtgacggcga ggacagagga ggcgcgtccg gccttcctga
1381 acaccttagg ctggtggggc tgcggcaaga agcgggtctg tttctttact tcctccacgg
1441 agtcggcaca ctatggctgc cctctgggct cccagaaccc acaacatgaa agaaatggtg
1501 ctacccagct caagcctggg cctttgaatc cggacacaaa accctctagc ttggaaatga
1561 atatgctgca ctttacaacc actgcactac ctgactcagg aatcggctct ggaaggtgaa
1621 gctagaggaa ccagacctca tcagcccaac atcaaagaca ccatcggaac agcagcgccc
1681 gcagcaccca ccccgcaccg gcgactccat cttcatggcc accccctgcg gcggacggtt
1741 gaccaccagc caccacatca tcccagagct gagctcctcc agcgggatga cgccgtcccc
1801 accacctccc tcttcttctt tttcatcctt ctgtctcttt gtttctgagc tttcctgtct
1861 ttcctttttt ctgagagatt caaagcctcc acgactctgt ttcccccgtc ccttctgaat
1921 ttaatttgca ctaagtcatt tgcactggtt ggagttgtgg agacggcctt gagtctcagt
1981 acgagtgtgc gtgagtgtga gccaccttgg caagtgcctg tgcagggccc ggccgccctc
2041 catctgggcc gggtgactgg gcgccggctg tgtgcccgag gcctcaccct gccctcgcct
2101 agtctggaag ctccgaccga catcacggag cagccttcaa gcattccatt acgccccatc
2161 tcgctctgtg cccctcccca ccagggcttc agcaggagcc ctggactcat catcaataaa
2221 cactgttaca gcaaaaaaaa aaaaaaaaa
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