LOCUS BC040693 1502 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD53 molecule, mRNA (cDNA clone MGC:49823
IMAGE:5498854), complete cds.
ACCESSION BC040693
VERSION BC040693.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1502)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1502)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: d Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21237756.
FEATURES Location/Qualifiers
source 1..1502
/db_xref="H-InvDB:HIT000052443"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49823 IMAGE:5498854"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1502
/gene="CD53"
/gene_synonym="TSPAN25"
/db_xref="GeneID:963"
/db_xref="HGNC:HGNC:1686"
/db_xref="MIM:151525"
CDS 97..756
/gene="CD53"
/gene_synonym="TSPAN25"
/codon_start=1
/product="CD53 molecule"
/protein_id="AAH40693.1"
/db_xref="GeneID:963"
/db_xref="HGNC:HGNC:1686"
/db_xref="MIM:151525"
/translation="MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLIHNNFGVLF
HNLPSLTLGNVFVIVGSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAIL
LFVYEQKLNEYVAKGLTDSIHRYHSDNSTKAAWDSIQSFLQCCGINGTSDWTSGPPAS
CPSDRKVEGCYAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNCQIDKTSQTIG
L"
BASE COUNT 395 a 355 c 319 g 433 t
ORIGIN
1 gttaccagcc ttgtctcggc cacctcaagg ataatcacta aattctgccg aaaggactga
61 ggaacggtgc ctggaaaagg gcaagaatat cacggcatgg gcatgagtag cttgaaactg
121 ctgaagtatg tcctgttttt cttcaacttg ctcttttgga tctgtggctg ctgcattttg
181 ggctttggga tctacctgct gatccacaac aacttcggag tgctcttcca taacctcccc
241 tccctcacgc tgggcaatgt gtttgtcatc gtgggctcta ttatcatggt agttgccttc
301 ctgggctgca tgggctctat caaggaaaac aagtgtctgc ttatgtcgtt cttcatcctg
361 ctgctgatta tcctccttgc tgaggtgacc ttggccatcc tgctctttgt atatgaacag
421 aagctgaatg agtatgtggc taagggtctg accgacagca tccaccgtta ccactcagac
481 aatagcacca aggcagcgtg ggactccatc cagtcatttc tgcagtgttg tggtataaat
541 ggcacgagtg attggaccag tggcccacca gcatcttgcc cctcagatcg aaaagtggag
601 ggttgctatg cgaaagcaag actgtggttt cattccaatt tcctgtatat cggaatcatc
661 accatctgtg tatgtgtgat tgaggtgttg gggatgtcct ttgcactgac cctgaactgc
721 cagattgaca aaaccagcca gaccataggg ctatgatctg cagtagtcct gtggtgaaga
781 gacttgtttc atctccggaa atgcaaaacc atttatagca tgaagcccta catgatcact
841 gcaggatgat cctcctccca tcctttccct ttttaggtcc ctgtcttata caaccagaga
901 agtgggtgtt ggccaggcac atcccatctc aggcagcaag acaatctttc actcactgac
961 ggcagcagcc atgtctctca aagtggtgaa actaatatct gagcatcttt tagacaagag
1021 aggcaaagac aaactggatt taatggccca acatcaaagg gtgaacccag gatatgaatt
1081 tttgcatctt cccattgtcg aattagtctc cagcctctaa ataatgccca gtcttctccc
1141 caaagtcaag caagagacta gttgaaggga gttctggggc caggctcact ggaccattgt
1201 cacaaccctc tgtttctctt tgactaagtg ccctggctac aggaattaca cagttctctt
1261 tctccaaagg gcaagatctc atttcaattt ctttattaga gggccttatt gatgtgttct
1321 aagtctttcc agaaaaaaac tatccagtga tttatatcct gatttcaacc agtcacttag
1381 ctgataatca cagtaagaag acttctggta ttatctctct atcagataag attttgttaa
1441 tgtactattt tactcttcaa taaataaaag tttattatct caatcacaaa aaaaaaaaaa
1501 aa
//