LOCUS BC040681 2577 bp mRNA linear HUM 12-FEB-2004
DEFINITION Homo sapiens leucine rich repeat and fibronectin type III domain
containing 1, mRNA (cDNA clone IMAGE:3355052), partial cds.
ACCESSION BC040681
VERSION BC040681.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2577)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2577)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: a Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..2577
/db_xref="H-InvDB:HIT000096330"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3355052"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 445 a 901 c 795 g 436 t
ORIGIN
1 ggtccgtctg gacatgacct ccaaccgcct gcataaactc ccgcccgacg ggctcttcct
61 gaggtcgcag ggcaccgggc ccaagccgcc caccccgctg accgtcagct tcggcggcaa
121 ccccctgcac tgcaactgcg agctgctctg gctgcggcgg ctgacccgcg aggacgactt
181 agagacctgc gccacgcccg aacacctcac cgaccgctac ttctggtcca tccccgagga
241 ggagttcctg tgtgagcccc cgctgatcac acggcaggcg gggggccggg ccctggtggt
301 ggaaggccag gcggtgagcc tgcgctgccg agcggtgggt gaccccgagc cggtggtgca
361 ctgggtggca cctgatgggc ggctgctggg gaactccagc cggacccggg tccgggggga
421 cgggacgctg gatgtgacca tcaccacctt gagggacagt ggcaccttca cttgtatcgc
481 ctccaatgct gctggggaag cgacggcgcc cgtggaggtg tgcgtggtac ctctgcctct
541 gatggcaccc ccgccggctg ccccgccgcc tctcaccgag cccggctcct ctgacatcgc
601 cacgccgggc agaccaggtg ccaacgattc tgcggctgag cgtcggctcg tggcagccga
661 gctcacctcg aactccgtgc tcatccgctg gccagcccag aggcctgtgc ccggaatacg
721 catgtaccag gttcagtaca acagttccgt tgatgactcc ctcgtctaca ggatgatccc
781 gtccaccagt cagaccttcc tggtgaatga cctggcggcg ggccgtgcct acgacttgtg
841 cgtgctggcg gtctacgacg acggggccac agcgctgccg gcaacgcgag tggtgggctg
901 tgtacagttc accaccgctg gggatccggc gccctgccgc ccgctgaggg cccatttctt
961 gggcggcacc atgatcatcg ccatcggggg cgtcatcgtc gcctcggtcc tcgtcttcat
1021 cgttctgctc atgatccgct ataaggtgta tggcgacggg gacagccgcc gcgtcaaggg
1081 ctccaggtcg ctcccgcggg tcagccacgt gtgctcgcag accaacggcg caggcacagg
1141 cgcggcacag gccccggccc tgccggccca ggaccactac gaggcgctgc gcgaggtgga
1201 gtcccaggct gcccccgccg tcgccgtcga ggccaaggcc atggaggccg agacggcatc
1261 cgcggagccg gaggtggtcc ttggacgttc tctgggcggc tcggccacct cgctgtgcct
1321 gctgccatcc gaggaaactt ccggggagga gtctcgggcc gcggtgggcc ctcgaaggag
1381 ccgatccggc gccctggagc caccaacctc ggcgccccct actctagctc tagttcctgg
1441 gggagccgcg gcccggccga ggccgcagca gcgctattcg ttcgacgggg actacggggc
1501 actattccag agccacagtt acccgcgccg cgcccggcgg acaaagcgcc accggtccac
1561 gccgcacctg gacggggctg gagggggcgc ggccggggag gatggagacc tggggctggg
1621 ctccgccagg gcgtgcctgg ctttcaccag caccgagtgg atgctggaga gtaccgtgtg
1681 agcggcgggc gggcgccggg acgcctgggt gccgcagacc aaacgcccag ccgcacggac
1741 gctggggcgg gactgggaga aagcgcagcg ccaagacatt ggaccagagt ggagacgcgc
1801 ccttgtcccc gggagggggc ggggcagcct cgggctgcgg ctcgaggcca cgcccccgtg
1861 cccagggcgg ggttcgggga ccggctgccg gcctcccttc ccctatggac tcctcgaccc
1921 ccctcctacc cctcccctcg cgcgctcgcg gacctcgctg gagccggtgc cttacacagc
1981 gaagcgcggg gaggggcagg gccccctgac actgcagcac tgagacacga gccccctccc
2041 ccagcccgtc acccggggcc ggggcgaggg gcccatttct tgtatctggc tggactagat
2101 cctattctgt cccgcggcgg cctccaaagc ctcccacccc accccacgca cattcctggt
2161 ccggtcgggt ctggcttggg gtcccccttt ctctgtttcc ctcgtttgtc tctatcccgc
2221 cctcttgtcg tctctctgta gtgcctgtct ttccctattt gcctctcctt tctctctgtc
2281 ctgtcgtctc ttgtccctcg gccctccctg gttttgtcta gtctccctgt ctctcctgat
2341 ttcttctctt tactcattct cccgggcagg tcccactgga aggaccagac tctcccaaat
2401 aaatccccac acgaacaaaa tccaaaacca aatccccctc cctaccggag ccgggaccct
2461 ccgccgcagc agaattaaac ttttttctgt gtctgagaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//