LOCUS BC040674 4919 bp mRNA linear HUM 13-SEP-2006
DEFINITION Homo sapiens cDNA clone IMAGE:4817018.
ACCESSION BC040674
VERSION BC040674.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4919)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4919)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 70 Row: p Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 53729315.
FEATURES Location/Qualifiers
source 1..4919
/db_xref="H-InvDB:HIT000096323_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4817018"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1189 a 1419 c 1393 g 918 t
ORIGIN
1 agcgggcacg ggctggtctc tgccctaatg cggcggctgg cggcgagagg cgctgcaggg
61 gacgcggggg aagtggcggc gccggcagcg gacagctcgg acagcgccca gggccggagc
121 ccgagccctt ggaggttgat tgacttatgt gcaatttggg acgctggagt ttaccttccc
181 tccgcagcct ggaacagagc ctcctctggt gttgcaagga agaggctgaa tgaggcagag
241 aagctgagtg ctgtccagga ggcccagtta aagcggctcg aggtgacaag accccgagtg
301 ctggggagca gggagcaggg ccaggtgccg aggatggcca ggcagccacc gccgccctgg
361 gtccatgcag ccttcctcct ctgcctcctc agtcttggcg gagccatcga aattcctatg
421 gatctgacgc agccgccaac catcaccaag cagtcagcga aggatcacat cgtggacccc
481 cgtgataaca tcatgattga gtgtgaagca aaagggaacc ctgcccccag cttccactgg
541 acacgaaaca gcagattctt caacatcgcc aaggaccccc gggtgtccat gaggaggagg
601 tctgggaccc tggtgattga cttccgcagt ggcgggcggc cggaggaata tgagggggaa
661 tatcagtgct tcgcccgcaa caaatttggc acggccctgt ccaataggat ccgcctgcag
721 gtgtctaaat ctcctctgtg gcccaaggaa aacctagacc ctgtcgtggt ccaagagggc
781 gctcctttga cgctccagtg caaccccccg cctggacttc catccccggt catcttctgg
841 atgagcagct ccatggagcc catcacccaa gacaaacgtg tctctcaggg ccataacgga
901 gacctatact tctccaacgt gatgctgcag gacatgcaga ccgactacag ttgtaacgcc
961 cgcttccact tcacccacac catccagcag aagaaccctt tcaccctcaa ggtcctcacc
1021 aaccaccctt ataatgactc gtccttaaga aaccaccctg acatgtacag tgatccctgc
1081 ctggggagaa ggaccactgc tgagatggcc tgccctgggg gccacacagt ggcctctggg
1141 atcccaacac aagctgctct ggagtagatc tcgcactgct cagacagccc ctccccgttc
1201 cagggaaggg gagattccct gaacctgagg gaagctgggc tcctccaggc agatcctttc
1261 agaacctaga gctcctctct ctcatcccga ggagttgcag aaagaacacc aagcttcatg
1321 tatccccagg gcaccgcgag cagccagatg gtgcttcgtg gcatggacct cctgctggaa
1381 tgcatcgcct ccggggtccc aacaccagac atcgcatggt acaagaaagg tggggacctc
1441 ccatctgata aggccaagtt tgagaacttt aataaggccc tgcgtatcac aaatgtctct
1501 gaggaagact ccggggagta tttctgcctg gcctccaaca agatgggcag catccggcac
1561 acgatctcgg tgagagtaaa ggctgctccc tactggctgg acgaacccaa gaaccttatt
1621 ctggctcctg gcgaggatgg gagactggtg tgtcgagcca atggaaaccc caaacccact
1681 gtccagtgga tggtgaatgg ggaacctttg caatcggcac cacctaaccc aaaccgtgag
1741 gtggccggag acaccatcat cttccgggac acccagatca gcagcagggc tgtgtaccag
1801 tgcaacacct ccaacgagca tggctacctg ctggccaacg cctttgtcag tgtgctggat
1861 gtgccgcctc ggatgctgtc gccccggaac cagctcattc gagtgattct ttacaaccgg
1921 acgcggctgg actgcccttt ctttgggtct cccatcccca cactgcgatg gtttaagaat
1981 gggcaaggaa gcaacctgga tggtggcaac taccatgttt atgagaacgg cagtctggaa
2041 attaagatga tccgcaaaga ggaccagggc atctacacct gtgtcgccac caacatcctg
2101 ggcaaagctg aaaaccaagt ccgcctggag gtcaaagacc ccaccaggat ctaccggatg
2161 cccgaggacc aggtggccag aaggggcacc acggtgcagc tggagtgtcg ggtgaagcac
2221 gacccctccc tgaaactcac cgtctcctgg ctgaaggatg acgagccgct ctatattgga
2281 aacaggatga agaaggaaga cgactccctg accatctttg gggtggcaga gcgggaccag
2341 ggcagttaca cgtgtgtcgc cagcaccgag ctagaccaag acctggccaa ggcctacctc
2401 accgtgctag ctgatcaggc cactccaact aaccgtttgg ctgccctgcc caaaggacgg
2461 ccagaccggc cccgggacct ggagctgacc gacctggccg agaggagcgt gcggctgacc
2521 tggatccccg gggatgctaa caacagcccc atcacagact acgtcgtcca gtttgaagaa
2581 gaccagttcc aacctggggt ctggcatgac cattccaagt accccggcag cgttaactca
2641 gccgtcctcc ggctgtcccc gtatgtcaac taccagttcc gtgtcattgc catcaacgag
2701 gttgggagca gccaccccag cctcccatcc gagcgctacc gaaccagtgg agcacccccc
2761 gagtccaatc ctggtgacgt gaagggagag gggaccagaa agaacaacat ggagatcacg
2821 tggacgccca tgaatgccac ctcggccttt ggccccaacc tgcgctacat tgtcaagtgg
2881 aggcggagag agactcgaga ggcctggaac aacgtcacag tgtggggctc tcgctacgtg
2941 gtggggcaga ccccagtcta cgtgccctat gagatccgag tccaggctga aaatgacttc
3001 gggaagggcc ctgagccaga gtccgtcatc ggttactccg gagaagattg cctactactg
3061 gagggagagc agcttgctga agaacctgtg ggtgtctcag aagagacagc aagccagctt
3121 ccctggtgac cgcctccgtg gcgtggtgtc ccgcctcttc ccctacagta actacaagct
3181 ggagatggtt gtggtcaatg ggagaggtga tgggcctcgc agtgagacca aggagttcac
3241 caccccggaa ggagtaccca gtgcccctag gcgtttccga gtccggcagc ccaacctgga
3301 gacaatcaac ctggaatggg atcatcctga gcatccaaat gggatcatga ttggatacac
3361 tctaaaatat gtggccttta acgggaccaa agtaggaaag cagatagtgg aaaacttctc
3421 tcccaatcag accaagttca cggtgcaaag aacggacccc gtgtcacgct accgctttac
3481 cctcagcgcc aggacgcagg tgggctctgg ggaagccatc acagaggagt caccagcacc
3541 cccgaatgaa gcttacacca acaaccaagc ggacatcgcc acccagggct ggttcattgg
3601 gcttatgtgc gccatcgccc tcctggtgct gatcctgctc atcgtctgtt tcatcaagag
3661 gagtcgcggc ggcaagtacc caggtgagat gtgcaagagg cgtgggcttg cagggtgggg
3721 cacgtccact ttcccgtgag tctccaggtc tccagccaga tccggggaat gtgttctctc
3781 agtgaagcca gcccttgccc ggattggaaa tacaatcctc ttgcctgtgc atcttcagac
3841 tgccagcgag cacttgagtt aattaagttc gcctgagttg ggcggatggc acagtccagg
3901 cggcctcaga gaggggatgg aaggaaccct ggctcctgtt aagaatgacc tttcctcccc
3961 ttgactcacc acccatctgt tctataaatt ggcttttttt cagcctgaat ctcattagga
4021 tcctgtgtcc cagggaagga gaaaggaaga gaggcatttt ccctaaccgt gtcccagaga
4081 atggggagag gaggggcctg ggcagaagca gcacccacat gagagagttc cagaggtggg
4141 cgctcagcag gacaacagtg taactgccaa taccactagc aagggtcaga agcgaggagc
4201 agggagaggc tgaagatggg tggcactggt agggaccccc atggccctaa agcactttgg
4261 gcttccctaa aatcccaagg atacctcaag atccttcagc ccctagccag gcacaatgac
4321 tcacacctgt aatcccagca cttcgggagg ccaaggtgag caggtcactt aaggtcagga
4381 gtttgaggcc agcccaacca acatgacgaa actccgtctc tactaaatat acaaaaatta
4441 gctgggtgtg gtggcaggtg tcggaggtcc cagctattca acaggctgag gtgggaggat
4501 tacctgagcc tggagaggtc aaggctgcca tgaggcgtga ttgtgccact gcactccagc
4561 ctgggtgaca gagaccctgt ctcaaataaa taaaattttt taaaagatcc tccaggccgg
4621 gcgcagtggc tcacacctgt aatcccagca ctttgcgagg ctgaggcagg cagatcactt
4681 gaggtcagga gttcgagacc agcctggcca acatggtgaa acccaatctc taccaaaaat
4741 acaaaaaatt agctgggtgt tttggcacgt gcctataatc acagctactc aggaggctga
4801 ggcaggagaa tcacttgaac ctgggaggca gaggttgcag tgagccgaaa tcgtgccact
4861 gcactccagc ctgggcggca gagcaagact ccgtctcaaa aaagaaaaaa aaaaaaaaa
//