LOCUS BC040656 1709 bp mRNA linear HUM 27-JUL-2005 DEFINITION Homo sapiens leucine rich repeat containing 3B, mRNA (cDNA clone MGC:42127 IMAGE:4798356), complete cds. ACCESSION BC040656 VERSION BC040656.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1709) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1709) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 70 Row: h Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 16945968. FEATURES Location/Qualifiers source 1..1709 /db_xref="H-InvDB:HIT000052440" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:42127 IMAGE:4798356" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1709 /gene="LRRC3B" /gene_synonym="LRP15" /db_xref="GeneID:116135" CDS 594..1373 /gene="LRRC3B" /gene_synonym="LRP15" /codon_start=1 /product="LRRC3B protein" /protein_id="AAH40656.1" /db_xref="GeneID:116135" /translation="MNLVDLWLTRSLSMCLLLQSFVLMILCFHSASMCPKGCLCSSSG GLNVTCSNANLKEIPRDLPPETVLLYLDSNQITSIPNEIFKDLHQLRVLNLSKNGIEF IDEHAFKGVAETLQTLDLSDNRIQSVHKNAFNNLKARARIANNPWHCDCTLQQVLRSM ASNHETAHNVICKTSVLDEHAGRPFLNAANDADLCNLPKKTTDYAMLVTMFGWFTMVI SYVVYYVRQNQEDARRHLEYLKSLPSRQKKADEPDDISTVV" BASE COUNT 484 a 406 c 387 g 432 t ORIGIN 1 agcggaaacg cagagctagg aggtgtgggc ctcgggtgag gggagaccca gctcttagac 61 ctgggagccc agacagaggt ggatctgccc accttgcagc tcccagagga ctcctgctgc 121 cttgtaccag ttgggaaaag caaaattcag agcagttcct ttttctgggt ccctcgcctt 181 ggccacatca gaggaaacgt cgactcgcca gggctcccgg gagaaatccc gaggtcagtc 241 cctcccattc tggggcaccc ctggagcagc tagctccctg cctagcggtg gcaaactcca 301 gagccccaag gagcagaacg gggattccct gtgcgcaggc tcctggtgca gctcctgagc 361 acaaaggcca caccctcaca gaccaggcct ggtgagagag ccgggcttct tcagaagtac 421 ctggatacct gaggtgccca agcaaggaaa gaaataatga agagacacat gtgttagctg 481 cagccttttg aaacacgcaa gaaggaaatc aatagtgtgg acagggctgg aacctttacc 541 acgcatgttg gagtagatga ggaatgggct cgtgattatg ctgacattcc agcatgaatc 601 tggtagacct gtggttaacc cgttccctct ccatgtgtct cctcctacaa agttttgttc 661 ttatgatact gtgctttcat tctgccagta tgtgtcccaa gggctgtctt tgttcttcct 721 ctgggggttt aaatgtcacc tgtagcaatg caaatctcaa ggaaatacct agagatcttc 781 ctcctgaaac agtcttactg tatctggact ccaatcagat cacatctatt cccaatgaaa 841 tttttaagga cctccatcaa ctgagagttc tcaacctgtc caaaaatggc attgagttta 901 tcgatgagca tgccttcaaa ggagtagctg aaaccttgca gactctggac ttgtccgaca 961 atcggattca aagtgtgcac aaaaatgcct tcaataacct gaaggccagg gccagaattg 1021 ccaacaaccc ctggcactgc gactgtactc tacagcaagt tctgaggagc atggcgtcca 1081 atcatgagac agcccacaac gtgatctgta aaacgtccgt gttggatgaa catgctggca 1141 gaccattcct caatgctgcc aacgacgctg acctttgtaa cctccctaaa aaaactaccg 1201 attatgccat gctggtcacc atgtttggct ggttcactat ggtgatctca tatgtggtat 1261 attatgtgag gcaaaatcag gaggatgccc ggagacacct cgaatacttg aaatccctgc 1321 caagcaggca gaagaaagca gatgaacctg atgatattag cactgtggta tagtgtccaa 1381 actgactgtc attgagaaag aaagaaagta gtttgcgatt gcagtagaaa taagtggttt 1441 acttctccca tccattgtaa acatttgaaa ctttgtattt cagtttcttt tgaattatgc 1501 cactgctgaa cttttaacaa acactacaac ataaataatt tgagtttagg tgatccacca 1561 cttaattgta cccccgatgg tatatttctg agtaagctac tatctgaaca ttagttagat 1621 ccatctcact atttaataat gaaatttatt tttttaattt aaaagcaaat aaaagcttaa 1681 ctttgaacca tggaaaaaaa aaaaaaaaa //