LOCUS BC040605 2591 bp mRNA linear HTC 09-JUN-2008
DEFINITION Homo sapiens galactosidase, beta 1-like 3, mRNA (cDNA clone
IMAGE:5271039), with apparent retained intron.
ACCESSION BC040605
VERSION BC040605.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2591)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2591)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: m Column: 10
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2591
/db_xref="H-InvDB:HIT000096262"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5271039"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 657 a 634 c 636 g 664 t
ORIGIN
1 gccatagcga gactccgtct cgaaaaaaaa caaaaaccca gaaagactga atatttggat
61 ggaagtttta ccagaagcac aaatgccgtt cacaggcaca tgtatgcaac gaggaaagct
121 aatttacagg catcccattg aactgtggga aatgctagga aacttttaag aagcaaggaa
181 ttataaggta ccgccaggca ggccctgtca tcgcggtgca agtggagaat gagtatggct
241 cattcaataa ggataaaaca tacatgccgt atctccacaa ggccctgctg agaagaggga
301 ttgtggagct tctcttgacc tctgatggtg agaaacatgt gctgagtggc cacaccaaag
361 gaggtacaca tttagagtta gttcacagga gaacagggct ctcagccagc ccgtgtaaat
421 cttgaacaca ctgcagagaa aaccaagtgc atctcgatac ctccctttcc cgtgtccact
481 gggatggatc ctggagttcg atgttacaat aaatgaggac tcaaggttaa ggctcagggc
541 cactcacagc tccctatctt ggccttgctc ctgccgtctt taaacacagc agcactggag
601 ctcctctgtt ctcaggacgc ctttccatct cccatagttt ttctgtggca agaaatctgc
661 attggtgttg cgcctggctt gggatcaggg ccgtctccac taacttggga aaccacaggg
721 agaaccagaa gatgggtgtt gtgtcaggaa ccccgcctag atccggttcc attcctggga
781 tcctaccgcc caaggctctg tgtggacact taggagatcc tagagaatta agtggcagga
841 agattctgga cggactcatc agatggcaat agtgagggac gcgcctggga gtgagcaggc
901 gagcggggcg agctgctgcc ggcggctgcc gttctgcctc cttagtagtg gctcttccaa
961 ggaagcctgg cacactggaa cacgtgctga gcttggggcc aggaagcctg tgtcgcgttt
1021 ccagtctaat catgtcaggg agccttggcc tggctcactt ctctgcacag agtgtggtta
1081 atttcaacag tgggtgtcct cgcaagtgtc agggatgtgg caatggccgt ggcagccctt
1141 tggatgtggc agagtggggt ccagacagca tctcgccatc ctcactgctg agcatgggtt
1201 cctcctgcgt gcgtccgggc cgggggcgca ttccttccct tccctgacag cacttgtctc
1261 atgcctcagc tgggtctctc tcttctttat gcagtgttgg ccgccatcaa tttgcaaaaa
1321 cttcaccagg atactttcaa tcagcttcat aaagtccagc cagtcaggtc gcgtcagccc
1381 gtcaacatgg agaaccttcc cataaacaat gggagcggcc agtcctacgg gcttgtcctg
1441 tatgagaagt ccatctgctc cggaggccgc ctccgtgccc acgctcatga catggcacag
1501 gtgtttttgg atgagacaat gatagggatt ctgaatgaga ataataagga cctgcacatt
1561 cctgaactca gggaataact ggatctgtca gcatcaataa ctcttccctg gagggcttta
1621 ccatctattc cctggagatg aaaatgagct tctttgagag gctccgctct gccacctgga
1681 agcctgtccc agacagccac cagggcccgg ccttctactg tgggaccttg aaggctggcc
1741 cttctcccaa ggacaccttc ctgagcctgc tgaactggaa ttatggattt gtgttcatca
1801 atggacgtaa ccttgggcga tattggaata ttgggcctca gaaaacactg taccttcctg
1861 gagtttggct tcatccagaa gacaatgagg tcatcttgtt tgagaagatg atgagtggct
1921 cagatatcaa atctacagac aagcccacgc tgtaaaactg tgtctgaaca tttttttttt
1981 ttttttgaga tggagtctca ctttgtcgcc caggctggag tgcagtggca caatctctgc
2041 tcactgcaag ctcagcctct cgggttcacg ccattctcct gcctcagcct ccccagcagc
2101 tgggactaca ggtgcacgcc accacgcctg gctaattttt tgtattttta gtagagatgg
2161 ggtttcacca agttagccag gatggtccca atctcctgac cttgtgatct gctctcctca
2221 gcctcccaaa gtactgggat tacaggcgtg agccaccact cccggccgtg aacatttttt
2281 gggttgctgg agttcatcta taagtcattt ttgaggaata agatttatgt taagactatc
2341 aaacacagtg ttgcctacaa tagcaaaaat gtgaaaataa caacaacaac aaaacagcag
2401 aggaattgtt atgtattttg tagtctatct atatgatgcc tatttttagg ctttaaaaag
2461 tcttcaaaat ctttaatgac tgatttatct agttaaatgc ttaatcctta gcaggctctt
2521 attctttaat taaacgtgcc tttgagtaga tgtgaataaa ataaaaacaa gtttcaaaaa
2581 aaaaaaaaaa a
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