LOCUS       BC040604                2990 bp    mRNA    linear   HUM 06-OCT-2005
DEFINITION  Homo sapiens solute carrier family 1 (high affinity
            aspartate/glutamate transporter), member 6, mRNA (cDNA clone
            MGC:43671 IMAGE:5270965), complete cds.
ACCESSION   BC040604
VERSION     BC040604.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2990)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2990)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 74 Row: m Column: 5.
FEATURES             Location/Qualifiers
     source          1..2990
                     /db_xref="H-InvDB:HIT000096261"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:43671 IMAGE:5270965"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..2990
                     /gene="SLC1A6"
                     /gene_synonym="EAAT4"
                     /db_xref="GeneID:6511"
                     /db_xref="HGNC:HGNC:10944"
                     /db_xref="IMGT/GENE-DB:10944"
                     /db_xref="MIM:600637"
     CDS             1358..2296
                     /gene="SLC1A6"
                     /gene_synonym="EAAT4"
                     /codon_start=1
                     /product="SLC1A6 protein"
                     /protein_id="AAH40604.1"
                     /db_xref="GeneID:6511"
                     /db_xref="HGNC:HGNC:10944"
                     /db_xref="IMGT/GENE-DB:10944"
                     /db_xref="MIM:600637"
                     /translation="MSSHGNSLFLRESGQRLGRVGWLQRLQESLQQRALRTRLRLQTM
                     TLEHVLRFLRRNAFILLTVSAVVIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQM
                     LVLPLIVSSLVTGMASLDNKATGRMGMRAAVYYMVTTIIAVFIGILMVTIIHPGKGSK
                     EGLHREGRIETIPTADAFMDLIRNMFPPNLVEACFKQFKTQYSTRVVTRTMVRTENGS
                     EPGASMPPPFSVENGTSFLENVTRALGTLQEMLSFEETVPVPGSANGINALGLVVFSV
                     AFGLVIGGMKHKGRVLRDFFDSLNEAIMRLVGIIIW"
BASE COUNT          682 a          773 c          752 g          783 t
ORIGIN      
        1 ggcatagcgc gtcccggctc cgcgccggtg cctccacggt ccggtccccg cgccggtgct
       61 gcacagtccc tggcgggtcc ccgcggcccc ggccgggcgc ttcgccgggc tccggctcct
      121 gcatccgggc gcagcgcgca ggccgaggcg cgggcaggcc gcccccgccg ctccggacgc
      181 cgggatgtaa gaggctccga aaagcagccc acgcatctca tcagatctaa gtgtctagag
      241 gtcgggagaa ccaagtggga aagacccacc ctcacccctc accttgtaga aactgggaac
      301 actagaaggg acattttctg agcaggaaac ccaagagaca gggttttacg ctgtcaccca
      361 agttggagtg cagtggtacg atcatagctc attgcagcct caaactcctg ggttcaagcg
      421 atcctcctgc tttagcctct tgagtagcta ggactacagg cacaggccac cgtgcctggc
      481 taatttttaa tttttaaaaa agagacaggg tctggctatg ttgcccaggc tggccatgaa
      541 ctcctgggct caagcggttc tccagccttc acctcccaaa gtgttgggat tgcaggcatg
      601 agccactgcg tctggcccac agatgctaag tgctgtctgc tcttctccag gggtcagcaa
      661 attttttcag caaatggccc aagagtaaat attttgagct ttgtggcccg tacaatctct
      721 gtcccaacaa ctcaactcag gcattgtagc ttgaaagcag ctgtagacaa taggtaatcc
      781 atgagtgtgg ctgtgtgcca ataaaacttt atttacaaaa acaagcagta ggctgaattt
      841 gactagcaga ccatagtttg tcaataccgt attatgtctt gtaaggaaga gaaaggaacc
      901 agacaaaact ctagcctcgg gagttttcct gactgttcag atcttagctg aatgatctcc
      961 cttggtatct acaggcaact tcctgctgtg gcttagggac tggaaacata atatcccaga
     1021 gggattccct gtgtagtctg tggttcactc tttgggattt tttttttttt tttcacagca
     1081 aggagaagca gcattgtggt ttcaggagat gggtccattt ggagcaggat cctaagtggg
     1141 gcttggcatt gggaatttgg attagctcta gaggacgcag gatctggaaa atcagggcag
     1201 atttcccatc ccttggatat ggtggggagt tgaggagggc aaggaagatc ccagaaaagc
     1261 cagtggcagc aaaacacaaa ggccagggac ctacgtactg gtaaaactga gacctccaag
     1321 aaacctgcag ctcgacctgg ttgaattcag atagaccatg agcagccatg gcaacagcct
     1381 gttccttcgg gagagcggcc agcggctggg ccgggtgggc tggctgcagc ggctgcagga
     1441 aagcctgcag cagagagcac tgcgcacgcg cctgcgcctg cagaccatga ccctcgagca
     1501 cgtgctgcgc ttcctgcgcc gaaacgcctt cattctgctg acggtcagcg ccgtggtcat
     1561 tggggtcagc ctggcctttg ccctgcgccc atatcagctc acctaccgcc agatcaagta
     1621 cttctctttt cctggagagc ttctgatgag gatgctgcag atgctggtgt tacctctcat
     1681 tgtctccagc ctggtcacag gtatggcatc cctggacaac aaggccacgg ggcggatggg
     1741 gatgcgggca gctgtgtact acatggtgac caccatcatc gcggtcttca tcggcatcct
     1801 catggtcacc atcatccatc ccgggaaggg ctccaaggag gggctgcacc gggagggccg
     1861 gatcgagacc atccccacag ctgatgcctt catggacctg atcagaaata tgtttccacc
     1921 aaaccttgtg gaggcctgct tcaaacagtt caagacgcag tacagcacga gggtggtaac
     1981 caggaccatg gtgaggacag agaacgggtc tgagccgggt gcctccatgc ctcctccatt
     2041 ctcagtggag aacggaacca gcttcctgga aaatgtcact cgggccttgg gtaccctgca
     2101 ggagatgctg agctttgagg agactgtacc cgtgcctggc tccgccaatg gcatcaacgc
     2161 cctgggcctc gtggtcttct ctgtggcctt tgggctggtc attggtggca tgaaacacaa
     2221 gggcagagtc ctcagggact tcttcgacag cctcaatgag gctattatga ggctggtggg
     2281 catcattatc tggtgagtcc tggtctgtgc ccacgggaag gtggagccag agctgggaag
     2341 tcaggctgtg gggaagctgc cgaagggctt gctggggacc tttggtcatt catttacgta
     2401 ttgggtgatt cacttaccca ctcaccaact cattcattca tgtctttctg ggatgatttc
     2461 atcactagtt cacttccttg ttcatctgtt cattcattca ttcttctatg cattggttag
     2521 ttcatggaat atctcactct ttcattcatt catgtccttc tgcaatgatt cattcactgc
     2581 tttgttcatc tgttcattca ctcattcttc tatgcattga tgaaatcact cattcagtga
     2641 tttattcatc tatactcatg cttcaatgca ttgatttact catttcctca tgcatttatt
     2701 cattcatcta tgcattggtt aaatcactgg ccaactcact aactcattca ttcattcaca
     2761 cttttctgca atgatttgtt cacttgttca ctcccttgct tatctgttca ttcactcatt
     2821 cttcaataca ttgaccaagc cattcactga catttattca gctacattta ttctttcatg
     2881 cattggtctg gatttatttg gtcattcatt tatttatttt gcaaaattaa tgtattttta
     2941 attgacaaat aaaaactgta tatattttca tgtgcaaaaa aaaaaaaaaa
//