LOCUS BC040564 3190 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens sarcoma antigen NY-SAR-48, mRNA (cDNA clone
IMAGE:5266883), with apparent retained intron.
ACCESSION BC040564
VERSION BC040564.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3190)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3190)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: a Column: 9
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3190
/db_xref="H-InvDB:HIT000096224"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5266883"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 744 a 838 c 845 g 763 t
ORIGIN
1 gagttccgcg tcctcggctg ggacgctggg cgacctccgg caagcggcct gaccgcccag
61 tgcctcgctt tcctccgcta cgaaatgggg ccgatgacgc agctcaacct cgtaggcgtc
121 gcgtgaggct gaaacgcgct tagatcggcg cctgggtctt tactgtgatg tcgctcttgg
181 aattatcgtt atgcagtgaa caagtgttgg gcgaccaaag tgtccccttt aatcctccca
241 cgcgctttat tctgtgctcc cagtttactg aggagatgat ggagacccag ggaggggaag
301 tgacttgcct agggtaacac accatgaaca agaaagaagt tgaatactga ccgagagcta
361 ggcatgaatg atcatgaggc tatatttgtc tagttttgtt aattctgcca gtgttgattg
421 tgccaggtgc aaactgaagt gaaattggcc agcaagagga atcactccac cgccccttgc
481 cgtaaccgat agattgacag tagcacctcc caggtacagg tgcagtagct gaggctcgca
541 caggttgtag ggacccccct caggtcgcag caggttcacc caggagccca ttcggtttga
601 ggccacagcc ctagcacagt ccccagaggg agtctgtgct cttgtctctt tctggctgtg
661 agactgcccc gggggtgacc tatgtaaaac ctgtgcgtct ttgttttgca gcgacgaaaa
721 agcaggtgtg aacagttagg aagctgtcgg gttaggagga gcctacgggc gagcgcagct
781 gctggcacct ggcgaacatt tgctaagttg cctctcccca cggtggcctg gaagtgtccc
841 caacattgtc tgggtctcac tttggggtcc tgggagcctg cttcagagga ggtggccgca
901 gggaccagtg gagccgcctt tggtgatggg agcaggagtt acagtgccct ggccttggcc
961 ctgcccctcc acttgcccat ccacttgccc ctcctgtgtt gctggtgtct gttcttggat
1021 cccttctttt ctcaccagct caggctgaaa ccctgaaacc cctagtcatc ccagattctc
1081 cctctcctgc acccccacag ctgatgagtc agcgattcct atctcagggt cccttctttc
1141 ctattacatc aggcttcatt ctatttttat ttttattttt atttttattt atttatttat
1201 tgagacggag tctcactgtc accctggctg gagtgcaatg gcgtgatctt ggctcactgc
1261 aacctgtgcc tcccgggttc aagcagttct cctgtgtcag tctcctgagt aggagggact
1321 acaggcgcat gccaccaccc cagctcattt ttgtattttt agtagagatg gggtttcacc
1381 atgttagcca ggatggtctc gatctcctga cctcgtgatc cgccagcctc agcctcccaa
1441 agtgaggtac ctgctgggac cactcctcgt acctgcctgt caagatgttg ttcttccctt
1501 tctgggaagg agctctgtgt tttgttacca ctgtgtctct actggaatat agtaggtgca
1561 tcaatgtctg gtgaatgaat gaacccaggg ataatttgag atctgctgtg atctcttcca
1621 cagagctctc attaccctcc tctcttctca gtttgggtgt tcacctatgc cttcttgccc
1681 aggtgaccag ggctggctgc tccttgtgtc ccttttcctg ttgaggtggc ccaccctcac
1741 tgaaattgtc ctctggcagc ccttggactg ggctgtctga gcttcaacta gcagaggcac
1801 ctcgccggct tccctgtgct tcttgggtag tgaggtgaac aagacctctc tctcttctct
1861 tgcaggaagc ctgcaaccgg ccccacaaat tctagcagtg ccaagaagaa ggataaaaga
1921 gttcaaggtg gaagagtgat tgagtcccgg tatctgcagt atgaaaagaa gacaacccaa
1981 aaggctcctg caggagatgg gtcacagacc cgagggaaga tgtctgaagg tggaaggaaa
2041 tccagcctgc tccagaaaag caaagcagat agcagtgggg tcggaaaggg tgacctgcag
2101 tccacgttgc tggaagggca tggcacagct ccacctgacc tggatctctc tgctattaat
2161 gacaaaagca tcgtcaaaaa gacgccacag ttagcaaaaa caatatcaaa gaaacctgag
2221 tcaacatcat tttctgcccc tcggaaaaag agcccggatt tatctgaagc aatggaaatg
2281 atggagtctc agacactact gctgacgcta ctatccgtaa agatggagaa caatcttgct
2341 gagtttgaaa gaagggcaga aaagaattta ttaataatgt gtaaggagaa ggagaagcta
2401 cagaaaaagg cccacgagct gaagcgcagg cttctcctct ctcagaggaa gcgggagctg
2461 gcagatgtcc tggatgccca gatcgagatg ctcagcccct tcgaggcagt ggccacacgc
2521 ttcaaggagc aatacaggac attcgccacg gccctggaca ctaccaggca cgagctgccc
2581 gtgaggtcca tccacctgga gggagatggg cagcagctct tagacgccct gcagcatgaa
2641 ctggtgacca ctcagcgcct cctgggagaa cttgatgttg gtgattcgga agaaaatgtg
2701 caggtgctgg acttactgag cgaactcaag gacgtgacgg cgaaaaagga ccttgagctc
2761 cgaaggagct ttgcccaggt gctggaactc tccgcagagg caagcaaaga ggcagccttg
2821 gcaaaccagg aagtctggga agagacccag ggcatggcgc cccccagccg gtggtatttc
2881 aatcaagaca gtgcctgcag agaatctggg ggagcaccca agaacacgcc cctgtctgag
2941 gacgacaacc cgggtgcctc gtcagccccc gctcaggcca cgttcatcag cccaagcgaa
3001 gatttttctt caagcagcca ggcagaagtc ccgccctctc tctctcgttc agggagggac
3061 ttgtcatgac tcatggttac attcaggata cttgagcact ttatatacta ccgtagcact
3121 gtagctattt tttatgtgat aatcttgttt gataaaaaag taaacctgtt ttgcaaaaaa
3181 aaaaaaaaaa
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