LOCUS BC040553 2465 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 60, mRNA (cDNA clone
MGC:39827 IMAGE:5301593), complete cds.
ACCESSION BC040553
VERSION BC040553.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2465)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2465)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: o Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341910.
FEATURES Location/Qualifiers
source 1..2465
/db_xref="H-InvDB:HIT000052427"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39827 IMAGE:5301593"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2465
/gene="CCDC60"
/gene_synonym="MGC39827"
/db_xref="GeneID:160777"
/db_xref="HGNC:HGNC:28610"
CDS 466..2118
/gene="CCDC60"
/gene_synonym="MGC39827"
/codon_start=1
/product="coiled-coil domain containing 60"
/protein_id="AAH40553.1"
/db_xref="GeneID:160777"
/db_xref="HGNC:HGNC:28610"
/translation="MTKVPATKKLQSSPNSGAVRPFYASENLRQVPDKPMKSIKYMDK
EIINLKKDLIRSRFLIQSVKIGRGYFAILREETAKKKKQQQLQKLKEEERNKFQPAEK
ISEIHYGDTLLSTYDDEKLKTLGARVTRRPFTPIHSCIISPSLTEAHVEPLFRQLCAL
HWLLEALTIDHTHHTMKPVITCWNPKDPGGSKSTIKKINKDKSMGQKWEHFITAPKTK
EFKIPTMRVTNRKPSRRGSTLSLSRASGGSSPQSSMISVNPGSDEPPSVNTQVTSSKD
IEDNESSSTKPDEEPLYMNLQKLLEMVREDARRTVTIENGMQRKAPSILSVLKQNKSN
SAYKEMQTTLKSSERSSSTSAESHIQPVQKKSKNRTNCDINIHYKSGVCNTMRAKFYS
VAQEAGFCLQDKMEILMKRQEERGIQKFRAFVLVSNFQKDIAKMRHHISVVKGDAEEI
ADHWYFDLLSKLPEDLKNFRPAKKILVKLQKFGENLDLRIRPHVLLKVLQDLRIWELC
SPDIAVAIEFVREHIIHMPQEDYISWLQSRINIPIGPYSALR"
BASE COUNT 714 a 622 c 569 g 560 t
ORIGIN
1 agttgcctac tttccccgca gtgcgataga cccctcgttg gggccgcctt agttctcggc
61 cgctctcgga ggatggcgat ctgggagccc ctccatggga ccactctcac actttgtcac
121 tggaatttta tttatttttt agttcatatt ttattttgct tatagaagag aaagatatac
181 cttccgaaga ggaggaagct tacagaagtt tataaccttt caaaaagtaa ataagtccag
241 gcttgcctga ttctgcccta cccggacttc cttatcccgt ctgtgggaga cccaggtgct
301 ttctcattac tcttcagaag gaaaccgctt tggagttcgt gtaattggga cttggggatc
361 agggagaagt tgccgaaact tctcatacca gtaactactg aagtagaaga ttctggaaaa
421 atccttgtct tgggggcaca ggctaaaacc tgaaggattt ttaagatgac caaggttcca
481 gccaccaaga agcttcagag ttcccccaac tcgggggctg tccggccctt ttatgcctcg
541 gagaacctaa ggcaggtccc agacaagcca atgaagagca tcaagtatat ggacaaggaa
601 ataataaacc tcaaaaagga ccttatacga agccgctttt tgatccagtc tgtgaagata
661 ggccgtggat attttgctat tctgagggaa gagactgcaa agaaaaagaa gcaacaacaa
721 cttcagaaac tgaaagagga ggaaagaaat aaattccagc cagccgaaaa gatctcagaa
781 atccactatg gggacacctt attgagcaca tatgatgatg agaagttgaa gacactggga
841 gctagagtca cacgtcgccc attcactccc atccacagct gcatcatttc tccctcgcta
901 accgaggctc acgtcgagcc cctcttccgc cagctctgtg ctctccactg gcttctggag
961 gccctgacta ttgaccacac ccaccacacc atgaagcctg tgatcacctg ctggaaccca
1021 aaggacccgg gtggaagcaa gagcaccatt aaaaaaatca ataaggacaa gtccatggga
1081 cagaaatggg agcatttcat cacagcgcca aagaccaagg aattcaaaat tcccacaatg
1141 cgagtcacca accgcaaacc aagccggcga ggctccacac taagtctgag tcgggccagt
1201 ggggggtcct ctccccagag cagcatgatc tctgtgaacc ctggctcgga tgagccccca
1261 agtgtgaaca cccaggtgac cagcagcaag gacattgagg acaatgagtc atcttcaacc
1321 aagccagatg aagaacctct gtatatgaat ctgcagaagc tcctggagat ggttcgggaa
1381 gatgcccgga ggacagtcac aatagaaaat gggatgcaaa gaaaagcacc cagcatcttg
1441 tcagtgctga aacaaaacaa gagtaattct gcttataagg aaatgcagac cactctcaaa
1501 tcaagtgaga gatccagcag tacaagtgca gaaagccaca tccaaccagt ccagaagaag
1561 tctaaaaacc gcactaattg tgacatcaac atccactaca agagtggggt gtgtaacacc
1621 atgagggcca agttttacag cgtagcccag gaggctggct tctgcctgca ggacaagatg
1681 gaaatcctca tgaagcgcca agaagagaga ggtatccaga agttccgtgc ttttgtcctt
1741 gtctcaaatt ttcaaaagga catagcaaaa atgagacatc acatatctgt agtaaaagga
1801 gatgcagaag aaattgcaga ccactggtac tttgatctgt tgtccaaact gccagaggat
1861 ctaaagaact tccgccccgc caaaaagatc ctggtgaaac tgcagaagtt tggagaaaac
1921 ctggacttgc ggattcgacc ccatgtcctc ctgaaggtgc tgcaggatct gaggatttgg
1981 gaactgtgct cccctgacat cgctgtggct attgagtttg tgcgagaaca catcatccat
2041 atgcctcaag aggattacat cagctggctg cagagccgga tcaacatacc cattgggccc
2101 tacagcgccc tgaggtaggc tgggcctggg ttgaccagct gtctcagtgg aggagtgttt
2161 gcctatatca tgttcctgta tcctgcctgt gttcctgcct cctgactacc ctcatggatg
2221 ctctttatgg atgacccttt acagtagggt catctggaga ctgacttcca gcaacatttt
2281 tagaggggga tggccccggt ggccctcccc tcaattccac accccagacc caacctacca
2341 gtctctgttc ttcaatgatc cagcctgact ctacctactt cctcttcaga ttccttcacc
2401 ctatttacct tcctcaagta ctggagaatt aaattgaact gaatgtttga aaaaaaaaaa
2461 aaaaa
//