LOCUS BC040530 4516 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:5260209, containing frame-shift
errors.
ACCESSION BC040530
VERSION BC040530.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4516)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4516)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: d Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39995077
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..4516
/db_xref="H-InvDB:HIT000096204"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5260209"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1360 a 895 c 987 g 1274 t
ORIGIN
1 ggaactggct gtggggctgc ggcggtgggg acgggccacg gcgttctgtg acatcccccc
61 gcctcccctc gtcttctccc ggctggcggc gaccggcctc agctgcagcg ggcccggggc
121 gtggggcctg ggttttttgt gacatcgtaa acatgagccc cacacagtgg gacttccctg
181 tggaattatg ttgccggcct atggcctttg ttactctgac gggcctggat gtagtttata
241 atgcagtcca tcgagctgtc tgggacgcct tctgtgcaaa tcggagagct gatcgagtac
301 caatttcttt caaggtgctc ccaggtgacc atgagtatcc caaatgtaga cccaagagaa
361 cttcatatga gtggtacatt cctaaaggga tcttaaagac tggctggatg aataagcatc
421 tgaatctggt gccagccctg gtggttgtgt tctatgaact ggactgggat gagcctcagt
481 ggaaagaaaa gcagtctgag tgcgccacca gagtggaaat agtcaggcaa agtttacaag
541 gaagaaacac aaaagttgca gtggttctga ttcagaagaa aacccctttg cccccaggag
601 aagatgtcat tgcttcagaa agggctgcag ctttatgcaa tgcatgtgaa ctctcaggaa
661 agtctttgtt tgtactgccg cacactgacc accttgtggg ttatattata agattggaaa
721 atgcctttta tgaacatgca cagacttatt actacactga gatcagaaga gtgaaatctc
781 ataaagaatt tttgaataaa acaacacacc agcttttgtt tgttaggcat cagttcaaaa
841 tagctttctt cagtgagttg aaacaagata cacaaaatgc gctgaagaat tataggaccg
901 cctataatct tgtacacgaa ttgagagccc atgaaactaa tattctggaa attaagacta
961 tggcaggatt tataaactac aagatctgta ggctgtgttt tcaacacaac accccattgg
1021 atgcaattgc tcagttccga aaacacatcg acttgtgtaa gaaaaagatt ggaagtgcag
1081 agctgtcttt tgagcatgat gcatggatgt ctaaacaatt ccaggccttt ggagatttat
1141 ttgatgaagc tattaagtta gggttaacag ctattcaaac tcagaatcct ggtttctatt
1201 accagcaggc agcatactat gcccaggagc ggaaacagct tgcaaaaacc ctctgtaacc
1261 acgaagcttc tgtaatgtat cccaatcctg atcccttaga aacacaaaca ggcgttcttg
1321 acttttatgg acaaagatca tggcgacaag gaatactaag ttttgatctt tctgatcctg
1381 aaaaagaaaa ggtgggaatt cttgccattc agctgaagga gagaaatgtt gttcactctg
1441 agataatcat aactcttctg agcaatgctg ttgcacagtt caagaagtat aagtgcccgc
1501 gaatgaaaag tcacctaatg gttcagatgg gagaggaata ttattacgca aaggattata
1561 ccaaagcttt gaagttgctg gattatgtga tgtgtgatta tcggagtgaa ggatggtgga
1621 ctctgctcac ttctgtatta actacagctc tgaagtgctc ctacctcatg gcccaattaa
1681 aggattacat tacttactcc ctagaactcc ttggtagagc ttcaactctg aaagatgacc
1741 agaagtctcg gatagaaaag aacctcataa atgttttaat gaatgaaagt cctgatccag
1801 aacccgactg tgatatctta gctgtgaaaa ctgctcagaa gctgtgggca gaccgaattt
1861 ctctggctgg cagcaatatt ttcacaatag gagtacagga cttcgtgcca tttgtgcagt
1921 gcaaagccaa gtttcatgcc ccaagttttc atgttgatgt tcctgttcag tttgatattt
1981 atctgaaggc tgattgtcca catcccatta ggttttccaa gctctgtgtc agctttaata
2041 atcaggaata caaccagttc tgtgtaatag aagaagcatc caaagcaaat gaagttttag
2101 aaaatctgac tcaaggaaag atgtgcctag ttcctggcaa aacaagaaaa ctgttattta
2161 agtttgttgc aaaaactgaa gatgtgggaa agaaaattga gattacttca gtggatcttg
2221 ctctgggcaa tgagacggga agatgtgtgg ttttaaattg gcagggagga ggaggagatg
2281 ctgcttcctc ccaagaagcc ttacaggcag ctcggtcttt caaaaggcga cctaagctac
2341 ctgacaatga agttcactgg gacagcatta taattcaggc aagcacaatg atcatatcca
2401 gagtccaaac atttctgtac atctgctaca tgaaccccct gcactgacta atgaaatgta
2461 ttgtttggtt gtgactgttc agtcccatga aaagacccaa atcagagatg tgaagctcac
2521 cgctggctta aaaccaggac aggatgccaa tttaactcag aagactcacg tgactcttca
2581 tggaacagaa ctgtgtgatg aatcctaccc ggctttactc actgacattc ctgttggaga
2641 cttacatcca ggggaacagc tggaaaaaat gttgtatgtt cgctgtggaa cagtgggttc
2701 cagaatgttt cttgtatatg tttcttacct gataaataca accgttgaag aaaaagaaat
2761 tgtttgcaag tgtcacaagg atgaaactgt aacaattgaa acagtctttc catttgatgt
2821 tgcggttaaa tttgtttcta ccaagtttga gcacctggaa agggtttatg ctgacatccc
2881 ctttctgttg atgacggacc tcttaagtgc ctcaccctgg gccctcacta ttgtttccag
2941 tgagctccac cttgctccat ccatgaccac agtggaccag ctcgagtctc aagtggacaa
3001 tgttatctta cagactggag agagtgctag tgaatgcttt tgtcttcaat gcccatctct
3061 tggaaatatt gaaggtggag tagcaaccgg gcattatatt atctcttgga aaaggacctc
3121 agcaatggag aatatcccca tcatcacaac tgtcatcact ctgccgcacg tgattgtgga
3181 gaatatccct ctccatgtga atgcagatct gccgtcattt gggcgtgtca gagagtcgtt
3241 acctgtcaag tatcacctac agaataagac cgacttagtt caagatgtag aaatttctgt
3301 ggagcccagt gatgccttca tgttctcagg tctcaaacag attcgattac gtatcctccc
3361 tggcacggag caggaaatgc tatataattt ctatcctctg atggctggat accagcagct
3421 gccatctctc aacatcaact tgcttagatt tcctaacttc acaaatcagc tgctcaggcg
3481 ttttatacct accagtattt ttgtcaagca acagggtcga ctcatggatg atacctctat
3541 tgctgctgca tgatgttcaa gaccggccct tggctgttgt tacagagatg ttgggcagag
3601 ctatgcaggt gtttcattgt gaactctagc tttgatcatg gtaaaaagtt aaccttttct
3661 attttttaat ggatgttata ccaactattc agaggaactc atacttcaaa aatattagga
3721 aaatctgtct tatagtttct ctaataaata tctgaaatct cagtacgaca tgaaagaatg
3781 tcagaccatt gttattgttg aaagtcattt gatgaatggt aaattctatg aaaagtaagt
3841 gatttgcatg tataatatca ggaaaattaa gcatcccaag tgtgactgga caaagagagc
3901 agatgcacca gtgcctgtgc cataaagttc cgaatccccc atgtgtctct ttcagagctg
3961 gccagaccgg aaataaatca ttctcataaa ttcagtgtgt actcagaaca catacacaac
4021 aacataggga gttgtatgac tgatacggaa aacttccaga aagttttaat caaagcagtt
4081 taattaaggt atcaaaaata tctttgctta ctatcaagaa gtgtcaaata ggttcagctt
4141 gctgccaaaa tatggatcat ttatgaagca ggttcatatt ttagaggtgt taataaaatc
4201 ctcatcggaa aagatccaaa gtgcaaggat ttgattataa acataatttc ctagactgaa
4261 agtttttgga aaagatgcag ggtctgagtc aggccttctg gttatattgt gcagtttcaa
4321 aagaactatt taaaactctt gaaaactcat gtaaataaaa atcatagggt gaaaattgta
4381 tttgttaaaa taccttaata atttaaaatg acctgatttc ctggaaaatt ttattattca
4441 aaaggtggag gcattgtaaa aaggaaatag tgatgtaaat aaacatgttc tctttcaagt
4501 aaaaaaaaaa aaaaaa
//