LOCUS BC040516 4013 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens SH3-domain GRB2-like (endophilin) interacting protein 1, mRNA (cDNA clone MGC:39465 IMAGE:5275011), complete cds. ACCESSION BC040516 VERSION BC040516.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4013) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4013) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 63 Row: j Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14150038. FEATURES Location/Qualifiers source 1..4013 /db_xref="H-InvDB:HIT000052411" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39465 IMAGE:5275011" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4013 /gene="SGIP1" /gene_synonym="DKFZp761D221" /db_xref="GeneID:84251" CDS 139..2718 /gene="SGIP1" /gene_synonym="DKFZp761D221" /codon_start=1 /product="SGIP1 protein" /protein_id="AAH40516.1" /db_xref="GeneID:84251" /translation="MMEGLKKRTRKAFGIRKKEKDTDSTGSPDRDGIQGKKKTQKTQL LLTSFFWLRALSLTLSQKKSNGAPNGFYAEIDWERYNSPELDEEGYSIRPEEPGSTKG KHFYSSSESEEEEESHKKFNIKIKPLQSKDILKNAATVDELKASIGNIALSPSPVRKS PRRSQGAIKRNLSSEEVARPRRSTPTPELISKKPPDDTTALAPLFGPPLESAFDEQKT EVLLDQPEIWGSGQPINPSMESPKLTRPFPTGTPPPLPPKNVPATPPRTGSPLTIGPG NDQSATEVKIEKLPSINDLDSIFGPVLSPKSVAVNAEEKWVHFSDTSPEHVTPELTPR EKVVSPPATPDNPADSPAPGPLGPPGPTGPPGPPGPPRNVLSPLNLEEVQKKVAEQTF IKDDYLETISSPKDFGLGQRATPPPPPPPTYRTVVSSPGPGSGPGPGTTSDGKTEAQR YQVICPSLQAGGNELDSYSGASSPARPATPLVPCRSTTPPPPPPRPPSRPKLPPGKPG VGDVSRPFSPPIHSSSPPPIAPLARAESTSSISSTNSLSAATTPTVENEQPSLVWFDR GKFYLTFEGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFEGADPSKCIVKITGEMVLS FPAGITRHFANNPSPAALTFRVINFSRLEHVLPNPQLLCCDNTQNDANTKEFWVNMPN LMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVNWRCEPSSTDLRIDYKY NTDAMTTAVALNNVQFLVPIDGGVTKLQAVLPPAVWNAEQQRILWKIPDISQKSENGG VGSLLARFQLSEGPSKPSPLVVQFTSEGSTLSGCDIELVGAGYRFSLIKKRFAAGKYL ADN" BASE COUNT 1255 a 900 c 806 g 1052 t ORIGIN 1 agtttgattc cagagcccca ctcggcggac ggaatagacc tcagcagcgg cgtggtgagg 61 acttagctgg gacctggaat cgtatcctcc tgtgtttttt cagactcctt ggaaattaag 121 gaatgcaatt ctgccaccat gatggaagga ttgaaaaaac gtacaaggaa ggcctttgga 181 atacggaaga aagaaaagga cactgattct acaggttcac cagatagaga tggaattcag 241 gggaaaaaaa agacccagaa gactcagctt ctcctcacct ctttcttctg gctcagagcc 301 ctctcgttaa ctctgtctca gaagaaaagc aatggggcac caaatggatt ttatgcggaa 361 attgattggg aaagatataa ctcacctgag ctggatgaag aaggctacag catcagaccc 421 gaggaacccg gctctaccaa aggaaagcac ttttattctt caagtgaatc ggaagaagaa 481 gaagaatcac ataagaaatt taatatcaag attaaaccat tgcaatctaa agacattctt 541 aagaatgctg caactgtaga tgaattgaag gcatcaatag gcaacatcgc actttcccca 601 tcaccagtga ggaaaagtcc gaggcgcagc cagggtgcaa ttaaaaggaa cttatccagt 661 gaagaagtgg caagacccag gcgttccaca ccaactccag aacttataag caaaaagcct 721 ccagatgaca ctacggccct tgctcctctc tttggcccac cactagaatc agcttttgat 781 gaacagaaga cagaagttct tttagatcag cctgagatat ggggttcagg ccaaccaatt 841 aatccaagca tggagtcgcc aaagttaaca aggccttttc caactggaac acctccacca 901 ctgcctccaa aaaatgtacc agctacccca ccccgaacag gatccccctt aacaattgga 961 ccaggaaatg accagtcagc cacagaggtc aaaattgaaa aactaccatc catcaatgac 1021 ttggacagca tttttgggcc agtattgtcc cccaagtctg ttgctgttaa tgctgaagaa 1081 aagtgggtcc atttttctga tacatccccg gaacatgtta ctccggagtt gactccaagg 1141 gaaaaagtgg tgtccccacc agctacacca gacaacccag ctgactcccc agctccaggc 1201 cctctcggcc ccccaggtcc cacaggcccc ccagggcctc ctgggcctcc tcgcaatgta 1261 ctatcgccgc tcaatttaga agaagtccag aagaaagtcg ctgagcagac cttcattaaa 1321 gatgattact tagaaacaat ctcatctcct aaagattttg ggttgggaca aagagcaact 1381 ccacctcccc caccaccacc cacctacagg actgtggttt cgtcccccgg acctggctcg 1441 ggccctggtc cggggaccac cagtgatggg aaaactgagg ctcagagata tcaagtaatt 1501 tgcccaagtt tacaagctgg aggcaatgaa ctggattcat actcaggtgc atcatcccct 1561 gctcgaccag ccactccttt ggttccttgc agaagtacca ctccacctcc acctcctccc 1621 cggcctccat cccggccaaa gctacctcca ggaaaacctg gagttggaga tgtgtccaga 1681 ccttttagcc ctcccattca ttcttccagc cctcctccaa tagcaccctt agcgcgggct 1741 gaaagcactt cttcaatatc gtcaaccaat tccttgagcg cagccaccac tcccacagtt 1801 gagaatgaac agccttccct cgtttggttt gacagaggaa agttttattt gacttttgaa 1861 ggttcttcca ggggacccag ccccctaacc atgggagctc aggacactct ccctgttgca 1921 gcagcattta cagaaacagt caatgcctat ttcgaaggag cagacccaag caaatgtatc 1981 gttaagatta ccggagaaat ggtgttgtca tttcctgctg gcatcaccag acactttgcc 2041 aacaacccgt ccccagctgc tctgactttt cgggtgataa atttcagcag gttagaacac 2101 gtcctgccaa acccccaact tctctgctgt gataatacac aaaatgatgc caataccaag 2161 gaattctggg taaacatgcc aaatttgatg actcacctaa agaaagtgtc tgaacaaaaa 2221 ccccaggcta catattataa cgttgacatg ctcaaatatc aggtgtctgc ccagggcatt 2281 cagtccacac ctctgaacct ggcagtgaat tggcgatgtg agccttcaag cactgacctg 2341 cgcatagatt acaaatataa tacagatgca atgacgactg ctgtggccct caacaatgtg 2401 cagttcctgg tccccatcga cggaggagtc accaagctcc aggcagtgct cccaccagca 2461 gtctggaatg ctgaacaaca gagaatattg tggaagattc ctgatatctc tcagaagtca 2521 gaaaatggag gggtgggttc tttgttggca agatttcagt tatctgaagg cccaagcaaa 2581 ccttctccat tggttgtgca gttcacaagt gaaggaagca ccctttctgg ctgtgacatt 2641 gaacttgttg gagcagggta tcgattttca ctcatcaaga aaaggtttgc tgcaggaaaa 2701 tacttggcag ataactaatg aaatcttatg caaggatttg gaggattcat ataatggaga 2761 actgatgtat gagaaacaga ttttaatttt ggtttgatga aaacaaacca atatctgcac 2821 ttgggatata tcaggtggaa agtcaatgac tttcatctgt gatttccctc acacactacc 2881 atgatgacca gtcctacagt atttacttct aggtgtaata ttgttaatgg ttttaaaatg 2941 taattattgt atttgtaaat tgtactctca ttccagtaag gcagttagac acttgagttt 3001 tagcatttta ccattcctga aatggatgta atttaaactg tggtatgtaa atttaatagt 3061 agtattgttg aatggcacaa tgcttacaga ggtagattgc attttgtcaa tatataaaat 3121 ttaaatataa tattgatagc tgtcataaag ggggtgccac atattaaaga aacttaagtg 3181 gaaccagaag aaaaagaaac aaacttactt ttcttcaatg cttagtatgt tttactctag 3241 tgctaaataa aaactctatc ttcaaatgtt tagtgggtta aattgagaaa ctatttcaga 3301 aaaaaattct aaggttacag catattcaaa gaaaagcatt agttaccact ttttaaaaag 3361 cttttttttc aaactgcaaa tttcataaaa atgcaaactg tgtaaacagg gcctcttatt 3421 tttataactt gtgtaaaaag ggaaagcaat tcatatttaa agtttaagta tattaaatta 3481 taatcaagag taaagaagat gctgaagtct taactacttg cccctctcta cagtttcgca 3541 aatgtgggga ttgctgaata atcagtcaga ctaaaaccaa aattgtgatt ttaagatttc 3601 aagactttcc gtagttgaac tggttaagaa tttttgctta gttactctga atagatgatc 3661 ttactcatcc agtatggggg aatgatacct cacgtcttcc tctttaccca caggaatcaa 3721 aacgctgaga ctgagaattt tagggaaaaa aaagtccgct gtttagatcc agaaggagag 3781 ttttaatcat tgtttatatc atttgagaat gaaaaaataa gcttcataaa tgaaattcta 3841 ttcacattac tgtgtaataa atttcctttt ggatgattag gattcattgt ataaaactgt 3901 aaatctttgc cattcttgga gaagcaaaag gagagttatc aaaaatgtat gtcgtttcat 3961 cgttgcaagg tataataaaa actgtaatta ttcaatcaaa aaaaaaaaaa aaa //