LOCUS BC040497 4216 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:5298630, containing frame-shift
errors.
ACCESSION BC040497
VERSION BC040497.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4216)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4216)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: n Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5174668
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..4216
/db_xref="H-InvDB:HIT000096194"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5298630"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1234 a 827 c 856 g 1299 t
ORIGIN
1 tggaggcagt ggcggttgcg gggcatgcgc ggctccgcgc gcggcttctc aaacatggcg
61 gcggcggtgt gaagctcggt gccggctcgc gcgatcggtg ggacagaatt tcgttgtttt
121 caccgacgag actggaggaa acaacaccaa atagggatac catgggacaa acagtgaatg
181 aagattccat ggatgtcaag aaggagaatc aagagaaaac tcctcagtca agtacatctt
241 ctgtacaaag ggatgatttc cactgggagg agtatttgaa agagactggg tctataagtg
301 ctccttcaga gtgcttccgt cagtctcaga ttccacctgt gaatgatttc aaagttggta
361 tgaaattgga agcccgtgac cctcgcaatg ccacttcagt atgtattgct acggttattg
421 gaattactgg ggccaggtta cggttacgac tggatggtag tgacaacaga aatgattttt
481 ggaggcttgt cgattcccca gacatacaac ctgttgggac atgtgaaaag gaaggagact
541 tacttcaacc tccactaggg taccagatga atacatcctc ctggccgatg ttcctcttaa
601 agacactaaa tgagtctgaa atggcatctg ccacattatt taagaaggaa ccaccaaagc
661 ccccactaaa taattttaaa gtggggatga aactggaagc tattgacaaa aagaacccgt
721 atctcatctg tcctgcgacc attggagatg ttaaagggga tgaagttcat atcacatttg
781 atggctgaag tggagctttt gattactggt gcaagtatga ttctcgagat attttcccag
841 ctgggtggtg tcgcctgaca ggagatgtat tacaaccccc aggaactagt gttcctattg
901 taaagaatat agcaaaaaca gagtcttctc cttccgaagc aagccagcat tcaatgcagt
961 ctccacagaa aactactcta atattaccaa cacagcaggt caggagatca agtcgaatta
1021 aaccacctgg acctactgca gtccccaaaa ggagcagttc tgttaaaaat atcacaccaa
1081 ggaaaaaagg tccaaactca ggaaaaaagg aaaaaccttt gcccgtgata tgttctacat
1141 ctgcagcttc tctaaaatcg ctgaccagag accgtggcat gttatataaa gatgtcgctt
1201 ctgggccatg taaaatagtg atgtctacag tctgtgtcta tgtaaacaaa catggaaact
1261 ttggccctca tctggatccc aagagaatcc agcagctgcc tgaccacttc ggcccgggcc
1321 cggtgaatgt ggtgcttcgc cggattgtgc aggcctgtgt ggattgtgcc cttgaaacta
1381 aaactgtttt tggatacctg aagccagata atcgtggagg agaagtgata actgcctcct
1441 ttgatgggga aactcattcc atccagctcc ctccagtgaa cagtgcatca tttgctcttc
1501 gctttcttga gaacttctgc cacagtctgc agtgtgataa ccttttgagt agccagcctt
1561 ttagttcttc caggggtcat actcacagct ctgcagagca tgataaaaat cagtcagcaa
1621 aagaagatgt aacagaaagg caaagcacca aacgatctcc tcagcaaact gtaccatatg
1681 ttgttcctct ctctcctaag ctccccaaaa caaaggagta tgcgtctgaa ggagaaccat
1741 tgtttgctgg gggaagtgcc attcccaaag aggagaatct ttcagaagat tctaagagct
1801 catcactaaa ttcaggaaat tatttgaatc ctgcctgtag aaatcctatg tatattcata
1861 cttcagtctc ccaggatttt tctcgaagtg tgccaggcac cacaagttca ccactagttg
1921 gggacatatc ccccaagagc agtccccatg aagttaaatt ccaaatgcag aggaaaagtg
1981 aagctccaag ttatatagct gtacctgatc ccagtgtcct gaaacaaggc ttctctaagg
2041 acccttcaac ctggtctgtg gatgaagtga tacagtttat gaaacataca gatcctcaga
2101 tatcaggccc cctcgccgac ctcttcaggc aacatgaaat tgatgggaag gctctgttcc
2161 tactcaagag tgtgtgatga tgaagtatat ggggctgaag ctggggccag cattaaagct
2221 gtgttactac attgaaaagc ttaaagaagg aaaatacagt taaaaaaatg tgtaagttta
2281 gattggacat aattctcagg tgtactgtta acattttaat ttaaaagtat ttctcttagc
2341 agtttttgtt ttgtagacag ttcccataaa aatattttat cagaattgca gaactgtagt
2401 aacagttcag tcaactttgt ttttttcctg gagtcaccaa ccagctttgg gagacacagc
2461 cgccactccc ccagtctact tctttaaaaa gcatttaaca ggttagtatt ggcatattca
2521 aattggcagt tctttatgtc tttttaaatt ttcattgtac agtttacaaa tatacttaat
2581 gtagttaaca gagaaaaacc tttgattttg gttaaccttt atatctagaa ccaaaacagc
2641 taaatcccaa aggggaaaat atcagggatt gacaacttct ataattaaat ccatgagaat
2701 ttttcctcac tagagaattt aaaggtgcac ctgtagatat catcttttct cagatatttt
2761 gtgtgatact ctgtggtgtt ctgttcatgt tctatcagta tatctagaaa gggaatagcc
2821 atataaatta ttttcctttt attatttctc tgtatgttgt atttgatcat atttaaagga
2881 aaaaagcaag cttataagct ttcatgaagt gttcttacca gtttttgata aattttttaa
2941 attataggat agaattgtca ttttatgcag gagatattta tactacgagg gttgtttgga
3001 tggagtcaga ttaaattttt tcagtgaaat tcctattatt ttaaaacttt ccatattttc
3061 actacgcttg gacatttaac taggcattct tttcttacat ctctatatga agatacctgt
3121 gtccaaaatt tttgaagata tatattgtat gtgtttattc ttcatatggt actttaccat
3181 atttatatat tgttttatac ctgtaggttt acacacaagt aaatcttttt tttcttgaat
3241 ttaatctggc actttgcact gccacagagg tgacgatgaa ctatgtatat agttagatgt
3301 tttgatttcg taaaaaatat atgtccatcg tttgctatca ccagtacctg tcagcttact
3361 cttcagggga tatgaaacaa tctgtagatt ggtttccata cagggaagtt ctctgtccta
3421 tgcaatgttt ctaattaatt tgcttagttc tgagccattt attctgctac actttgaaag
3481 atatattagt tctgacttat tgtttggggc tttattttat ttttattttt ttgagatgga
3541 gtttcactct tgttgcccag gctggggtgc aatagctcga tctcggctca ctgcaacctc
3601 gcctccctgg ttcaagcaat tctcctgcct cagcgattac aggaatgcac caccacgccc
3661 agctaatttt gtagagatgg ggtttctcca tgttggtcag gctggtctca aactcctgac
3721 ctcaggtgat ccgcccacct cggccttgca aaatgctggg attacaggca tgagccacca
3781 tgcccagcca tgtttggggc tttattttat aagttagaac tttgaagagg aaatggtgct
3841 atatgtttat tgttattact ttgtgtaact ttgatgtaat gtttataagc tatgagaatc
3901 agttataaaa gtattagcca tttgttgtaa atgccaataa aatattcacc aggggcaaga
3961 atgtacattt tctttttaga aaaccaaatg tactttagac atgaatgcaa ctatttaaag
4021 aatagcttca tttatgttat tccttacatg tcataagatt cttacttaaa cttggtcttc
4081 tttcaagttg tttgtatgaa gatgctgtac ccacttgaac agtcctcagg tgtttacata
4141 aatactatgt tttacagttt tcatatttta aaatattaat aaagttaatc gcaacgattc
4201 aaaaaaaaaa aaaaaa
//