LOCUS BC040496 4086 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens tubulin polymerization promoting protein, mRNA (cDNA
clone IMAGE:5302992), partial cds.
ACCESSION BC040496
VERSION BC040496.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4086)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4086)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: o Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5902017.
FEATURES Location/Qualifiers
source 1..4086
/db_xref="H-InvDB:HIT000096193"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5302992"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..4086
/gene="TPPP"
/gene_synonym="p24"
/gene_synonym="p25"
/gene_synonym="p25alpha"
/gene_synonym="TPPP/p25"
/gene_synonym="TPPP1"
/db_xref="GeneID:11076"
/db_xref="HGNC:HGNC:24164"
/db_xref="MIM:608773"
CDS <1..706
/gene="TPPP"
/gene_synonym="p24"
/gene_synonym="p25"
/gene_synonym="p25alpha"
/gene_synonym="TPPP/p25"
/gene_synonym="TPPP1"
/codon_start=2
/product="TPPP protein"
/protein_id="AAH40496.1"
/db_xref="GeneID:11076"
/db_xref="HGNC:HGNC:24164"
/db_xref="MIM:608773"
/translation="GRGGASAAVAASPSNMADKAKPAKAANRTPPKSPGDPSKDRAAK
RLSLESEGAGEGAAASPELSALEEAFRRFAVHGDARATGREMHGKNWSKLCKDCQVID
GRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALEELAKKRFKDKSSEEAVREVHRLIE
GKAPIISGVTKAISSPTVSRLTDTTKFTGSHKERFDPSGKGKGKAGRVDLVDESGYVS
GYKHAGTYDQKVQGGK"
BASE COUNT 859 a 1355 c 1236 g 636 t
ORIGIN
1 gggtcgcgga ggcgcctccg ctgcagtcgc tgcgtctcca agcaacatgg ctgacaaggc
61 caagcctgcc aaagctgcca acaggacgcc ccccaagtcc ccgggggacc cctcgaagga
121 ccgggcagcc aagaggctgt cgctggaatc ggagggtgct ggtgaggggg cagccgcatc
181 ccctgagctc agtgccctgg aggaggcctt ccggcgcttt gccgtgcacg gggacgccag
241 ggccaccggg agggagatgc acggcaagaa ctggtcgaag ctgtgcaagg actgccaggt
301 gatcgacggc aggaacgtga ccgtcactga cgtggacatc gtcttcagca agatcaaagg
361 gaagtcttgc cggacaatca cctttgagca gttccaggag gcgctggagg agctcgccaa
421 gaagcgattc aaagacaaga gcagcgagga ggccgttcgc gaggtgcaca ggctcatcga
481 gggcaaggcg cccatcatct caggggtgac gaaagccatc tcgtcgccca cagtgtcgag
541 gctcacggac accaccaagt tcacgggctc ccacaaggag cgcttcgacc cctctggcaa
601 gggcaagggc aaggctggcc gcgtggatct ggtggacgag tcaggctatg tgtccggcta
661 caagcacgca ggcacctacg accagaaggt gcaagggggc aagtagcccc cgctccatgc
721 ctcgcggcac tgccggtgtc cccagagcag ggactctgtc acctcgcact tcattacatt
781 cctgtactaa ctggggcaga actcagacgg gtgccccaga gggggctggg gggcggccag
841 gcccaggcct ccctcctgcc cctcctccta ccggatgccc ccagcactcc cctctcaaac
901 caggtttggg ccccagttcg ctgaccctcc taatacacct gcctcgtcct cagccatttc
961 caaagtgtct cgcggatcac accacactgg gcacgtggtt tgcaggtcaa aggggcgttt
1021 taaagcagct ggctgtcatg gcaacaggag gctgtgctga cctcctgagc ggcagacacc
1081 ttccaggagc cctgagggtg gcaggagcta accccaacca gcaggcaact aacacggaat
1141 tggccccaca ccggacgtgg gaggtgtctg tggggcccga ggcctgtcct gtgtgcagcg
1201 gacaccacgg ggccttcctg ctttcctggg cagagggcag agtgaggcca cctggcgggg
1261 gtgctgggcg cctggcacat gtgtggggaa gccggtcaca tggacacacc tgtgcacaca
1321 tgcctacagg ccagctctgt gccaagggca acctaggtaa aacgaaagcc gtcaggggca
1381 gtgggcggct tcccggctga ccacagtggc ttggactgtg agggtagagt aggctcgctt
1441 tgctttcctg agaagatgcg gtggctgcct atgttctcag agcgggtctg ggaagattca
1501 gaatgtccgg tccctgtggt gttgccaggc aagagacacg aagtgccgag acactcctcg
1561 cctcaccgcg tgacagagcc tctgcccggc cctcccgttc gcccgtcctc actagctgca
1621 ccctgtttgc tcgcagacct cccattgcca cagcccaagc accttcttca actctcccaa
1681 aatggctcag cctaacctct cctggccaat cccccccgcc ggagagcagg acactaggga
1741 ggacccccag tcctgcagtg tctgtggggg tttctctgcc agcagggggc tgagcagagc
1801 ccatccagga cactccacac tgccaggaca cacccaggcg gcccgccctt gcctgtctgc
1861 acctggggag aagccggcgc tcctgctccc tcctggggag gctgacgggt gtggccaccc
1921 gctgtcacaa tggcacactg ccactgtccc ttggcacgca cacagccaca gccacacgtg
1981 tgacctgctg ggccgtggtt ctggagtcta cctgcggatg agcctgcggc agtcctgggg
2041 aaacttttcc agagcctgtt agcccgtggc tacggtcagg ctctggccag ggcagagggc
2101 tgcccagggc caggctcaca gtacaggagg gtggcgaggc ccctccctca ctggcacgca
2161 tgagcaccac ccgcctcccc gactcccaag agtgcacctg ctgcggccac agctccgtgg
2221 aaggactccc cctacctgag cagagcagaa gccccagggc ggagctccca gccagcatgg
2281 tccgctgagg gctggggggc ggtctccgag gcccctcaac agagaagcct ccacctgagg
2341 atggggagga cctggcaggc agcttccacg gcagggctgg gaagttcagt gcctggaaat
2401 aaagagcaag gaaaaatgga cctcaggctt cgtggctcct ttaggatgtc acctcaccgg
2461 cctggggaag gcggggggtg cccaagccca gccctgtgcc cccgctgaac ctggctggac
2521 cgcgtgtgaa aggcagaact aacgtgcgga aacatttgaa aacaactctg aatgtgcggt
2581 tcggaatcac ccgatcacag acgagcggtc accggaatcg cccggtcaca gacgagcagt
2641 catcggactc acccgatcac agacgagcgg tcaccggaat cgcccgatca cagacgagcg
2701 gccacgggaa tcgcccaatc acagacaagc agtcatcgga atcacccgat cacagacgag
2761 cagtcatcgg actcacccga tcacagacga gcggtcacca gactcgcccg atcacagacg
2821 agcagtcatc ggaatcaccc gatcacagac gagcagtcat cggactcacc cgatcacaga
2881 cgagcggtca ccagaatcgc ccgatcacag acgagcagtc atcggaatca cccgatcaca
2941 gacgagtggc caccggaatc acccgataac agcccatcac aactccaaag cccttgtgtt
3001 gaaaaggccg aggacgagtg gtcaccaaac agggtggctc cccaggtccc gaagcctgag
3061 acccggaagg ccctggcacc cttacaccct cggactcctg ccctcctcgg cctccctggc
3121 cccagcgcgg ctccaccctg ggctgcgtct cctggtcaca ggctgcgttt ctcctttctg
3181 tccgtgggca gcccagtccc cacagtcacg gccaagccac gcagaacgaa catgactcca
3241 gaggacctcg ccctggagct gagcctggcg ccgggtcagg acggagggaa gggcgggttg
3301 gggtccgcgg gtcctcacac cgcacggcag gcacagaggc tcgccaggcc ctgatccggt
3361 ctgtggggac gagggacact gaggagaggt gctgggcacc aggacgctgc ctcctggtcc
3421 ctggttggcc tcagacaagc acggcctcga gaaaagagcc aagcgcatcg ggagcacacc
3481 agaaaccggc cctgagcacg agaagagcct ccgcccggcc cgggcaccac ccgacctcgc
3541 agggagcagg ccctgtcacc gacgggtcac ctcgcccaca cggccagcac cgactcacca
3601 cagcccttcc cagacctggc tggagtggcc ggagcggcgg ggctcatggc tcccatcttg
3661 gcccctggag gtgagctcat tcacagaagt ggtcccttca ctctgagaga gaaaatcgtg
3721 gcgtgcatcc caaaccctag gccacgcctg tgggtttcgt gaatgagatc gaggctgctg
3781 tggcaccctg cccgtcctgg cctggagcac cctgggatcc tggagggaga ggccccacgc
3841 ccccactctc cctccacact tccagggttg gtgcccacga gttagaggca cggcctcccc
3901 cagcggccct caggcttttc tcagacatgc gggagccagg agagcaccct tctccactca
3961 gctccaaagc gaatctttga aaacacccac tcggctccca tctctgtcac ctagccagga
4021 ggggtagcaa aaataaagtc acgaggacat agtggtcacc actgtcagct aaaaaaaaaa
4081 aaaaaa
//