LOCUS BC040481 4929 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens zinc fingers and homeoboxes 1, mRNA (cDNA clone
MGC:33068 IMAGE:5271344), complete cds.
ACCESSION BC040481
VERSION BC040481.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4929)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4929)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: b Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 63079679.
FEATURES Location/Qualifiers
source 1..4929
/db_xref="H-InvDB:HIT000052396"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33068 IMAGE:5271344"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4929
/gene="ZHX1"
/db_xref="GeneID:11244"
/db_xref="HGNC:HGNC:12871"
/db_xref="MIM:604764"
CDS 431..3052
/gene="ZHX1"
/codon_start=1
/product="zinc fingers and homeoboxes 1"
/protein_id="AAH40481.1"
/db_xref="GeneID:11244"
/db_xref="HGNC:HGNC:12871"
/db_xref="MIM:604764"
/translation="MASRRKSTTPCMVLASEQDPDLELISDLDEGPPVLTPVENTRAE
SISSDEEVHESVDSDNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSY
VCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKRNNQTIFEQTINDLTFDGSFVKE
ENAEQAESTEVSSSGISISKTPIMKMMKNKVENKRIAVHHNSVEDVPEEKENEIKPDR
EEIVENPSSSASESNTSTSIVNRIHPSTASTVVTPAAVLPGLAQMITAVSAQQNSNLI
PKVLIPVNSIPTYNAALDNNPLLLNTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSA
QRLKHGVSWTPEEVEEARRKQFNGTVHTVPQTITVIPTHISTGSNGLPSILQTCQIVG
QPGLVLTQVAGTNTLPVTAPIALTVAGVPSQNNIQKSQVPAAQPTAETKPATAAVPTS
QSVKHETALVNPDSFGIRAKKTKEQLAELKVSYLKNQFPHDSEIIRLMKITGLTKGEI
KKWFSDTRYNQRNSKSNQCLHLNNDSSTTIIIDSSDETTESPTVGTAQPKQSWNPFPD
FTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKA
LKEEKMEIDESNAGSSKEEAGETSPADESGAPKSGSTGKICKKTPEQLHMLKSAFVRT
QWPSPEEYDKLAKESGLARTDIVSWFGDTRYAWKNGNLKWYYYYQSANSSSMNGLSSL
RKRGRGRPKGRGRGRPRGRPRGSKRINNWDRGPSLIKFKTGTAILKDYYLKRKFLNEQ
DLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDEVIDDQEEDEEETDDSD
TWEPPRHVKRKLSKSDD"
BASE COUNT 1693 a 862 c 965 g 1409 t
ORIGIN
1 acaggtcaga gttgactccc tgaaaagtgc agccggtttg aaatgcaaga tggcggcggc
61 gtggcgctga gaggcgcggc ggcccctgca ggagaagaca gactgctgct ttggacctgt
121 tggtaatgat ggcctgagct aaacatctaa ctagaaggga tacccttcca tttcaaagaa
181 cagaatgcta aggaagctgt ggcaagtgat tggagttgtg cttcaaaaat ttcagaaatt
241 cagcagtatt atatctgcca acaataagct ctttacttga ttgcaccatg agaaagctgc
301 taatgagact tgttgagcac aaaaatggac ttgaagaacc aaaagccatt gttttcaaat
361 gaagaacact gaacagtttt aagcctcgat gctttttaat caccactgag cttttcctca
421 taacatcaga atggcaagca ggcgaaaatc aacaacacct tgcatggtcc ttgccagtga
481 acaagatcca gaccttgagt tgatatcaga tttggatgaa ggtcctcctg tgcttacacc
541 tgtagaaaac accagagcag agagtatctc aagtgatgaa gaggttcatg aatctgtgga
601 ttcagacaat cagcaaaata aaaaagttga aggtggatat gaatgtaaat attgtacttt
661 tcaaactcca gatctaaata tgtttacttt tcatgtggat tcggaacatc ccaatgtagt
721 gctaaattca tcctatgttt gtgtcgaatg caattttctt accaaaaggt atgatgcact
781 ttctgagcat aatctgaaat atcacccagg agaagagaat tttaagttga ctatggtgaa
841 acgtaataac cagacaatct ttgaacaaac aataaatgat ctgacttttg atggtagttt
901 tgttaaagag gagaatgcag agcaagcaga atctacagaa gtttcttctt cgggaatatc
961 tatcagtaaa actcctatca tgaaaatgat gaaaaataaa gtggaaaata aacggattgc
1021 agttcatcat aactcagttg aggacgttcc tgaagagaaa gagaatgaaa tcaaaccaga
1081 ccgtgaagaa attgtagaaa atccaagttc ttcagcttct gaatctaata caagtacttc
1141 cattgtaaac agaatacatc caagtactgc cagcacggta gtgacaccag cagcagttct
1201 tcctggattg gcacagatga taactgctgt atctgctcag cagaattcta atttgattcc
1261 caaagtctta atccctgtta atagcattcc cacctacaat gctgcattgg ataacaatcc
1321 ccttttactt aacacctaca acaagttccc ttacccaaca atgtcagaaa ttacagttct
1381 ttctgctcaa gcaaaatata cagaggaaca gatcaagata tggttttcag cccaacgttt
1441 aaaacatggt gttagttgga ctcccgagga agtagaggag gcaagaagga aacaattcaa
1501 tggaacagtg catactgtac ctcagaccat aactgttatt cctacacaca tttccacagg
1561 gagtaatggt ttaccatcta ttttacagac atgccaaata gttggtcagc ctggtctggt
1621 ccttactcaa gtggctggaa caaacacctt gccagttaca gcacctatag ccttgacagt
1681 ggcaggcgtt ccaagtcaaa ataatataca gaaaagtcag gtacctgctg ctcagcctac
1741 tgcagaaaca aagccagcaa cagcagcagt tccaacttct caaagtgtca aacatgaaac
1801 tgcattggta aaccctgatt catttggcat tcgggcaaaa aagacaaaag agcaactggc
1861 agaattaaaa gttagctacc ttaaaaatca gtttccccat gattcagaaa ttatcagact
1921 tatgaaaata acaggcctga cgaaaggaga gattaaaaaa tggtttagtg acacaaggta
1981 caaccagaga aattcaaaga gtaatcagtg cttacatctc aacaatgatt cctctaccac
2041 cattattata gactccagtg atgaaaccac ggaatcccca actgttggta ctgcacagcc
2101 taagcaatcc tggaatcctt ttcctgactt tactccccaa aagtttaaag agaaaactgc
2161 agagcagctt cgtgtccttc aggcaagttt tctcaacagc tctgtactta cagatgaaga
2221 attaaatagg ttaagggcac aaaccaaact taccagaaga gaaatcgatg cttggtttac
2281 agagaagaag aaatcaaaag ctttaaagga agagaaaatg gaaatagatg aaagtaatgc
2341 aggtagttcc aaagaagaag ctggagaaac ttctcctgca gatgaatctg gtgcacctaa
2401 gtcagggagt acaggcaaga tatgtaaaaa aacacctgag cagctgcaca tgcttaagag
2461 tgcatttgtc cggacacagt ggccatcacc agaagagtat gacaagttgg ccaaagaaag
2521 cgggcttgct agaacagaca tagttagttg gtttggggac acccgttatg cttggaagaa
2581 tggaaacttg aaatggtact actactatca gagcgccaat tcaagtagta tgaatggtct
2641 gtcttccctt aggaaaagag ggagagggag acccaaagga cggggaagag gaagaccgcg
2701 tgggcggcct agaggaagca aaagaattaa caactgggac aggggaccat cactcataaa
2761 atttaaaact ggaactgcaa tacttaagga ttattacctg aagcgcaagt ttcttaatga
2821 gcaagacctt gatgaacttg ttaacaaatc acatatgggc tatgagcagg tcagagagtg
2881 gtttgcagaa agacagagaa gatcagaatt aggtatagaa ttatttgagg aaaatgagga
2941 ggaagatgaa gttattgatg accaggaaga ggatgaagaa gaaacagatg atagtgacac
3001 ttgggaacct ccacgacatg tgaaacggaa gctgtctaaa tcagatgact gaaatctgcc
3061 taaaacgttg aaggagaatc aattcttcaa ctcaagatgt ctgatttact gtgaatttgc
3121 ccaatctttg atgacattga aaacgttttg gggcatacac actcaaaaag caggatccaa
3181 tacccaaaag aaatggaact taatgttgtg ccaaagttaa actactgcag ttggtggaag
3241 ttctgcaatg taaatagaac actaattaaa aaacaacttg taaaaatgca atttaaattt
3301 taatacagta catttttctt ctaatatgat ggagacattc tgaatcttag actttctgag
3361 ggggtttaat gaccactaga gcttgtcctc atattcagtc cagtttaata ctgtatgtct
3421 agtaagatgg gctatatatt gcctctattc tttgagatgt gattaagctt agaactttga
3481 ccaaaaattt tacagtaaaa attgttagaa atgggtaaaa aaaaaaaaaa aaaaaaaaac
3541 cctgatttat tactatgtct tatttatcag accctgcact aagattaaaa gttgtgcatg
3601 ggcttataca atttcaaatg taaaaacagc ctatttatat atgttgaaac aataagattt
3661 tatggtttca ctggccctta ataattggat tcttcattaa acacatccat gaataccact
3721 gtttctactg ttacttgttc cattagaagc tgatttgctt tttattaaac tgcaggaaat
3781 taattctgaa gaaggaaaag aaactgacat ggtaatttgg atagggtgaa gctttgaaat
3841 aaatactgca ccaaaaatgt gaaaaagaat cacgtagtaa atgtatactt agtgttttct
3901 tacaatcgtg gaaatcagaa atgtttatac aggtgtcaga tcagaatttt taagagttat
3961 ctttcagtga aattttataa cagtttcagt gaatagagaa aaaattctga actgatcata
4021 atgagttaaa agttagcttt tcacttatga atcatgggag tgttaactgt taactcttgc
4081 cgtatcagga gactgaaagt tcatactaat ttacaaactt tgtaaagact ggtgctgttc
4141 attcatattg ggaagaaccc tttcttttgt gaccatagga ccatttttca aaatgcgctt
4201 tcttcgtaga agaaatgttc agtttaatta gctttggatt ttaacatgtt tttctgaatg
4261 accagatgta ggcttagcca gtttattttc tctaatttaa tggataataa atattaagct
4321 cttggttaaa tgtttttcag ccattgaaaa tgttatgaaa aagccttgaa tatgcatgct
4381 gctttcattt ttataaactt tttatttttt aactatagct ttattagtaa ttccaaaatg
4441 ctgcaatgta gctgatttcc tcactcagac agctggcttt gtgggtggct tttttcatac
4501 tactgttaac ttttttaaaa aagaagcaat gtaaagaccg taatgcacta agcttttttt
4561 ttttctttta cacgtttaaa aacttcttaa agcactctgt aatataatga ttaaattgct
4621 cccttttata aacattgcta atgtggtctg agttttgttt gacaataatt ttaatgttct
4681 caaaatttga aatgtcaagt attagaaatg aagcctttga atatagttgt ttcccttgca
4741 atatgttaac tctgtgtagc tgtatataac tattaatttc cctcatctct tttataggcc
4801 tgataaaact cttctctgac gtttgctagc ttttaaatat atttatttga cagagcaaaa
4861 gaaccctctt ctggttgatt gtgaccttga atacaaaata aaagtagtga ttaggaaaaa
4921 aaaaaaaaa
//