LOCUS BC040458 3653 bp mRNA linear HUM 30-JUL-2005
DEFINITION Homo sapiens catenin (cadherin-associated protein), alpha 2, mRNA
(cDNA clone MGC:26134 IMAGE:4815068), complete cds.
ACCESSION BC040458
VERSION BC040458.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3653)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3653)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: l Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7656998.
FEATURES Location/Qualifiers
source 1..3653
/db_xref="H-InvDB:HIT000096176"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26134 IMAGE:4815068"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3653
/gene="CTNNA2"
/gene_synonym="CAP-R"
/gene_synonym="CAPR"
/gene_synonym="CTNR"
/db_xref="GeneID:1496"
/db_xref="MIM:114025"
CDS 606..2669
/gene="CTNNA2"
/gene_synonym="CAP-R"
/gene_synonym="CAPR"
/gene_synonym="CTNR"
/codon_start=1
/product="CTNNA2 protein"
/protein_id="AAH40458.1"
/db_xref="GeneID:1496"
/db_xref="MIM:114025"
/translation="MLYTASQAFLRHPDVAATRANRDYVFKQVQEAIAGISNAAQATS
PTDEAKGHTGIGELAAALNEFDNKIILDPMTFSEARFRQSLEERLESIISGAALMADS
SCTRDDRRERIVAECNAVRQALQDLLSEYMNNTGRKEKGDPLNIAIDKMTKKTRDLRR
QLRKAVMDHISDSFLETNVPLLVLIEAAKSGNEKEVKEYAQVFREHANKLVEVANLAC
SISNNEEGVKLVRMAATQIDSLCPQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVR
VLTEAVDDITSVDDFLSVSENHILEDVNKCVIALQEGDVDTLDRTAGAIRGRAARVIH
IINAEMENYEAGVYTEKVLEATKLLSETVMPRFAEQVEVAIEALSANVPQPFEENEFI
DASRLVYDGVRDIRKAVLMIRTPEELEDDSDFEQEDYDVRSRTSVQTEDDQLIAGQSA
RAIMAQLPQEEKAKIAEQVEIFHQEKSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMT
DFTRGKGPLKNTSDVINAAKKIAEAGSRMDKLARAVADQCPDSACKQDLLAYLQRIAL
YCHQLNICSKVKAEVQNLGGELIVSGLDSATSLIQAAKNLMNAVVLTVKASYVASTKY
QKVYGTAAVNSPVVSWKMKAPEKKPLVKREKPEEFQTRVRRGSQKKHISPVQALSEFK
AMDSF"
BASE COUNT 1089 a 792 c 936 g 836 t
ORIGIN
1 gagacccagg cgggcgggca gagcaggcgg caccgcacct cggccagagg cggctgcagc
61 agctgctgcc cttgtccctg ccgccgcctc tccagtccct tctgtgatta ccactccagc
121 tgctgggaac gggcgagaaa gaggaggagg cgagaaactc ccaccgaccc acagagggag
181 catgacttcg gcaacttcac ctatcattct gaaatgggac cccaaaagtt tggaaatccg
241 gacgctaaca gtggaaaggc tgttggagcc acttgttaca caggtgacta cacttgtcaa
301 cacaagcaac aaaggcccat ctggtaaaaa gaaagggagg tcaaagaaag cccatgtact
361 agctgcctct gtagagcaag ccactcagaa tttcctggaa aagggtgaac agatcgctaa
421 ggagagtcaa gatctcaaag aagagttggt ggctgctgta gaggatgtgc gcaaacaagg
481 tgagacgatg cggatcgcct cctccgagtt tgcagatgac ccttgctcgt cggtaaagcg
541 cggcaccatg gtacgggcgg caagggcttt gctctccgcg aggggctctg aagaagaatg
601 ccacaatgct gtacacggcc tctcaagcat ttctccgcca cccagatgtc gccgctacga
661 gagccaaccg agattatgtg ttcaaacaag tccaggaggc catcgccggc atctccaatg
721 ctgctcaagc tacctcgccc actgacgaag ccaagggcca cacgggcatc ggcgagctgg
781 ctgcggctct taatgagttt gacaataaga ttatcctgga ccccatgacg ttcagcgagg
841 ccaggttccg gcagtccctg gaggagaggc tggagagcat catcagcggc gcagcgctga
901 tggccgactc ctcctgcacg cgagacgacc ggcgcgagag gatcgtggcg gagtgcaacg
961 ccgtgcggca ggcgctccag gacctgctca gcgagtacat gaataatact ggaaggaaag
1021 aaaaaggaga tcctctcaac attgcgattg ataagatgac taagaagaca agagatctaa
1081 ggagacagct tcggaaagca gtgatggatc acatatctga ctctttcctg gaaaccaatg
1141 ttcctttgct agttctcatt gaggctgcaa agagcggaaa tgaaaaggaa gtgaaagaat
1201 atgcccaagt tttccgtgag catgccaaca aactggtaga ggttgccaat ttggcctgtt
1261 ccatctccaa caatgaagaa ggggtgaaat tagttcggat ggcagccacc cagattgaca
1321 gcctgtgtcc ccaggtcatc aatgccgctc tgacactggc tgcccggcca cagagcaaag
1381 ttgctcagga taacatggac gtcttcaaag accagtggga gaagcaggtc cgagtgttga
1441 cagaggccgt ggatgacatc acctcagtgg atgacttcct ctctgtctca gaaaatcaca
1501 tcttggagga tgtgaacaag tgtgtgatag ccctccaaga gggcgatgtg gacactctgg
1561 accggactgc aggggccatc aggggccggg cagctcgagt catacacatc atcaatgctg
1621 agatggagaa ctatgaagct ggggtttata ctgagaaggt gttggaagct acaaaattgc
1681 tttctgaaac agtgatgcca cgcttcgctg aacaagtaga ggttgccatt gaagccctga
1741 gtgccaacgt tcctcaaccg tttgaggaga atgagttcat cgatgcctct cgcctggtgt
1801 atgatggcgt tcgggacatc agaaaggctg tgctgatgat caggacccca gaagaactag
1861 aggatgattc tgactttgag caggaagatt atgatgtgcg tagcaggaca agtgttcaga
1921 ctgaggatga ccagctcatt gcagggcaga gcgcacgggc catcatggcg caactaccgc
1981 aggaggagaa ggcaaaaata gctgagcagg tggagatatt ccatcaagag aaaagcaagc
2041 tggatgcaga agtggccaaa tgggacgaca gcggcaatga tatcattgta ctggccaagc
2101 agatgtgtat gatcatgatg gaaatgacag acttcacaag aggcaaaggc ccattgaaaa
2161 atacatctga tgtcattaat gctgccaaga aaattgccga agcaggttct cgaatggaca
2221 aattagctcg tgctgtggct gatcagtgtc ctgattcagc atgtaagcag gatttattag
2281 cctaccttca acgaattgcc ttgtattgcc atcagcttaa tatctgcagc aaggtgaagg
2341 cagaagtgca gaatctggga ggagagctca ttgtgtcagg gctggacagt gccacatcgc
2401 ttatccaggc agctaaaaac ctgatgaatg ctgttgtcct cacggtgaaa gcatcctatg
2461 tggcctcaac caaataccag aaggtctatg ggacagcagc tgtcaactca cctgttgtgt
2521 cttggaagat gaaggctcca gagaagaagc cccttgtgaa gagagaaaag cctgaagaat
2581 tccagacacg agttcgacga ggttctcaga agaaacacat ttcgcctgta caggctttaa
2641 gtgaattcaa agcaatggat tccttctagg acgataggtt ttaacaagaa agctttttct
2701 ttcttttctt tctttctttt tctttttaat tccatttttg tatgcatacc tgccagctcg
2761 tatgcctctg gcatggggaa attaagggaa cagtgtctgt ttgcatgtaa gatgagatga
2821 gatcaatact actgatccat ctgtagcctg ggaaggagac aggacattcc tgtactgagg
2881 tggcacagag ctgtcctttg caacattctc ataaaattgg gcacagagtt cgcattggcg
2941 caatatttat gggagtggga gggatgggga aaataaactt aactctacaa aagcaaactc
3001 taatgcatgc aagaatcatt aggttggcag gtatatgcat aagtgaaaaa tctggaagtg
3061 taatggtaga acataaaact tgtattgctt ctgtttcagt gcaaaaatgt actagccaat
3121 acgcttaagt gtgtggccca tgaattgaac aatttaacct tgaagtctat atccgtgata
3181 ttatgtcgat ttttaactga ggggaaatta actagtccag cctaaaatgc ttcttttaat
3241 ctgcattctg tttcctcttc tagttgtgcc attactagtg atcatgtttt tttcccccct
3301 ttaatgaaaa caataaacat ctatttgaga caattaaaat ccttctgggg gcactggaag
3361 cacaatacgg tgaccaatct tgctttcatt ttttttcttt ttaatttgaa ccatgatttt
3421 gctagaaata gaaggcccag tggtggaata ttagagggaa ggaaactgac aacgtgtgaa
3481 agttagaggc aaatacatag gtgtagcttg gagtgctggt atctaatata ccattgtatt
3541 cactaactaa ctcaaaataa acacatttaa tcttgaaaaa aaaaaaaaaa aaaaaaaaaa
3601 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaacca aaaaaaaaaa aaa
//