LOCUS BC040342 4861 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 38, member 2, mRNA (cDNA clone
MGC:8808 IMAGE:3874551), complete cds.
ACCESSION BC040342
VERSION BC040342.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4861)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4861)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: o Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543637.
FEATURES Location/Qualifiers
source 1..4861
/db_xref="H-InvDB:HIT000052375"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8808 IMAGE:3874551"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4861
/gene="SLC38A2"
/gene_synonym="ATA2"
/gene_synonym="KIAA1382"
/gene_synonym="PRO1068"
/gene_synonym="SAT2"
/gene_synonym="SNAT2"
/db_xref="GeneID:54407"
/db_xref="HGNC:HGNC:13448"
/db_xref="MIM:605180"
CDS 343..1863
/gene="SLC38A2"
/gene_synonym="ATA2"
/gene_synonym="KIAA1382"
/gene_synonym="PRO1068"
/gene_synonym="SAT2"
/gene_synonym="SNAT2"
/codon_start=1
/product="solute carrier family 38, member 2"
/protein_id="AAH40342.1"
/db_xref="GeneID:54407"
/db_xref="HGNC:HGNC:13448"
/db_xref="MIM:605180"
/translation="MKKAEMGRFSISPDEDSSSYSSNSDFNYSYPTKQAALKSHYADV
DPENQNFLLESNLGKKKYETEFHPGTTSFGMSVFNLSNAIVGSGILGLSYAMANTGIA
LFIILLTFVSIFSLYSVHLLLKTANEGGSLLYEQLGYKAFGLVGKLAASGSITMQNIG
AMSSYLFIVKYELPLVIQALTNIEDKTGLWYLNGNYLVLLVSLVVILPLSLFRNLGYL
GYTSGLSLLCMVFFLIVVICKKFQVPCPVEAALIINETINTTLTQPTALVPALSHNVT
ENDSCRPHYFIFNSQTVYAVPILIFSFVCHPAVLPIYEELKDRSRRRMMNVSKISFFA
MFLMYLLAALFGYLTFYEHVESELLHTYSSILGTDILLLIVRLAVLMAVTLTVPVVIF
PIRSSVTHLLCASKDFSWWRHSLITVSILAFTNLLVIFVPTIRDIFGFIGASAASMLI
FILPSAFYIKLVKKEPMKSVQKIGALFFLLSGVLVMTGSMALIVLDWVHNAPGGGH"
BASE COUNT 1449 a 863 c 924 g 1625 t
ORIGIN
1 cgacgccgcc gccttagaac gcctttccag tactgctagc agcagcccga ccacgcgtta
61 ccgcacgctc gcgcctttcc cttgacacgg cggacgccgg aggattgggg cggcaatttg
121 tcttttcctt ttttattaaa attatttttc ctgcctgttg ttggatttgg ggaaattttt
181 tgtttgtttt ttatgatttg tatttgactg agagaaaccc actgaagacg tctgcgtgag
241 aatagagacc accgaggccg actcgcgggc cgctgcaccc accgccaagg acaaaaggag
301 cccagcgcta ctagctgcac ccgattcctc ccagtgctta gcatgaagaa ggccgaaatg
361 ggacgattca gtatttcccc ggatgaagac agcagcagct acagttccaa cagcgacttc
421 aactactcct accccaccaa gcaagctgct ctgaaaagcc attatgcaga tgtagatcct
481 gaaaaccaga actttttact tgaatcgaat ttggggaaga agaagtatga aacagaattt
541 catccaggta ctacttcctt tggaatgtca gtatttaatc tgagcaatgc gattgtgggc
601 agtggaatcc ttgggctttc ttatgccatg gctaatactg gaattgctct ttttataatt
661 ctcttgacat ttgtgtcaat attttccctg tattctgttc atctcctttt gaagactgcc
721 aatgaaggag ggtctttatt atatgaacaa ttgggatata aggcatttgg attagttgga
781 aagcttgcag catctggatc aattacaatg cagaacattg gagctatgtc aagctacctc
841 ttcatagtga aatatgagtt gcctttggtg atccaggcat taacgaacat tgaagataaa
901 actggattgt ggtatctgaa cgggaactat ttggttctgt tggtgtcatt ggtggtcatt
961 cttcctttgt cgctgtttag aaatttagga tatttgggat ataccagtgg cctttccttg
1021 ttgtgtatgg tgttctttct gattgtggtc atttgcaaga aatttcaggt tccgtgtcct
1081 gtggaagctg ctttgataat taacgaaaca ataaacacca ccttaacaca gccaacagct
1141 cttgtacctg ctttgtcaca taacgtgact gaaaatgact cttgcagacc tcactatttt
1201 attttcaact cacagactgt ctatgctgtg ccaattctga tcttttcatt tgtctgtcat
1261 cctgctgttc ttcccatcta tgaagaactg aaagaccgca gccgtagaag aatgatgaat
1321 gtgtccaaga tttcattttt tgctatgttt ctcatgtatc tgcttgccgc cctctttgga
1381 tacctaacat tttacgaaca tgttgagtca gaattgcttc atacctactc ttctatcttg
1441 ggaactgata ttcttcttct cattgtccgt ctggctgtgt taatggctgt gaccctgaca
1501 gtaccagtag ttattttccc aatccggagt tctgtaactc acttgttgtg tgcatcaaaa
1561 gatttcagtt ggtggcgtca tagtctcatt acagtgtcta tcttggcatt taccaattta
1621 cttgtcatct ttgtcccaac tattagggat atctttggtt ttattggtgc atctgcagct
1681 tctatgttga tttttattct tccttctgcc ttctatatca agttggtgaa gaaagaacct
1741 atgaaatctg tacaaaagat tggggctttg ttcttcctgt taagtggtgt actggtgatg
1801 accggaagca tggccttgat tgttttggat tgggtacaca atgcacctgg aggtggccat
1861 taattggcac cactcaaact caaactcagt ccatctgatg ccagtgttga gtaaactcaa
1921 ctactatgaa atttcaccta atgttttcag tttcacttcc ttttgaagtg cagattcctc
1981 gctggttctt ctgagtgcag aataagtgaa cttttttgtt ttgttttgtt tttttaagaa
2041 acttatctgt atgttagaaa tggatatgaa caacaaaacc acgagtctcg ggttaaggga
2101 agtgacaatt ttattccatt ccagagaatg gacaaactct taacttttat caagccacat
2161 gcttggctgt gtcattgttt aacttggata ttttatgatt ttacttgaat gtgcctaatg
2221 gaaccatttg atgtgagaaa caattctttt taatttacag caaaatattg aataaccatt
2281 gacaaaaaca ctattatttt ttgtaccaaa aatacttaaa gacctcagaa gcactctttt
2341 acttttaaga aattgctttt ttgaacttta ttcagaagca gttatcaata aattccataa
2401 aataatgtca ttggtattta aaaatgaata ttaatataat gaaatggttt gcctttttgt
2461 aggcataata agccaaatac ttttttaccc aaaataattt ttagagaaaa tgatgtaatg
2521 aaaaattgta ccatgaatta ggagcatagt tttttccatt taaacgtcac cattacttaa
2581 aagatgattg attattgcta taccaaatca gatgaactct gttcatcact tttcttctct
2641 gtccccaaac aatttggttc attcagactg aaatgtttgt gtcttcaact tattagaatg
2701 gaagataatg cagatatttc tgtgggaaat aaaataacta attttgaggt accaaatagt
2761 gcaattgggt aaaacagggt ttattcagtt gcatctgtct ccagtgttgt attgacagct
2821 ctgggtcttt ttttgggcca gccctttttt gacattgctt ccagcagtgg aaaatgggca
2881 tttgatggca ataggccaaa attattgtgt ccagagagta cactttttca aaatgctcac
2941 ctactggaag tgtgaattac ttgacaatgt atggcttagt tgtgttcatg ttttgtctac
3001 agtagaggtc taatccacag gttacaccta tgtttgatat gatataagtt ctctttgcgt
3061 aggccactgg gtttctcatg cagtaagctt tataaaaact catttgcact ggactgtcat
3121 ctcattcttg tacaacgtag aattacttgt ttacatccaa caaatggtta gctagggaaa
3181 acagtgcaaa ctgagtgtta gtagtcattt tggtccaact gcatgtcaac ccttccattt
3241 caatcccagt tagaaatgaa aataattact ttgaaacttg gctttaagag cacatttatc
3301 gtacgtcaca gtgtatggtg aatatattat taaataatgt ggtacttcgc tcatcaggca
3361 taatgtctaa aatctaatat acataattcc attaagtggt tgaaggaagc aaataatgga
3421 attgtcaatt ggtcatctgg ctgtaaggtt tgcccttgaa ctaaaaatgt tgtttggggc
3481 aagggccaga aatgtggaga catggttttt gttacgcatt cttgtattat atgtgactaa
3541 atttacaaac aagatacatg tgtaattaaa gacccttatg gaactggaag acgtcttgta
3601 gtgctacatt gggtgaaacc gttggtccat ttttgtctgt ttctatgaag ataaaataat
3661 tgggggccat ctagaaatag aaaggcagtg ggaagacaga ttctacggca ctgctttcat
3721 ttaattgggc tttaggcact ccattcgaat gcagaacctc acctctagtt gagaccaaga
3781 attggcaaat ttgcatgagc tcctggaaag agttgctgac tttgtatcta agacctgcca
3841 gggaatacca agagttgttt ctacagactt tttttttttt ttgtatggga gaagatactg
3901 tggcaaccag gaaggaatgg aaaaaaaatt cttttctcta cagcaaatta atgtgaggaa
3961 gctcctccaa tcctctggct atttaaggtt caaaatcaag tgcctaggga aaattccaat
4021 ggatgatttt ctgggagcta tcttgtctac cttgaggttc ctgaacaatg aattcccatt
4081 aatgagcagt cttcagtatt aaaaccactg tcttgtcacc tcattttgca ttactgtctt
4141 ccgtggatgt ttcagttaca actgtaatgt tatttataga acaacattaa tccattaaag
4201 ctaacctatt tttcaatatt tatgataatc tatgtacata tattgtctgt ccatatgtat
4261 ttgtaaatag gttgtatata atgtcaggtt tgggtcttgg gttcaagtgt atatattcct
4321 gtaagtttct taactgcatt ttgatgaatt cacattatgt aactataaga attgtcccaa
4381 aagtacctgt acagaaaatt gaatattgaa aaattgacaa attgtgtaca aacactaaaa
4441 aaaacttgtt taaattgtat ttgcaataaa caacatcaaa ttttttcatg aaatcttggt
4501 acaaattcag atctcttatt taaaatttaa ataaggaata cattttcaaa atgcagtaat
4561 caaaatgtga tctagtgtaa tgaaataaaa tgtgatctag tgtaatggaa gacctttgag
4621 aacctgggtg tattaacttt gtgtatatag tgtaaatatc cccactgtac tgttagaggc
4681 caacaattct agtatggctt gttggcaaag agtgctacac cgtttcaatg aaacaatgta
4741 tgtttgtttt aactgaacta aaataaatac atgcttaatc ctgaaaaaaa aaaaaaaaaa
4801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4861 a
//