LOCUS BC040324 2416 bp mRNA linear HTC 29-AUG-2005
DEFINITION Homo sapiens 3-phosphoinositide dependent protein kinase-1, mRNA
(cDNA clone IMAGE:4830546), with apparent retained intron.
ACCESSION BC040324
VERSION BC040324.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2416)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2416)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: h Column: 13
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2416
/db_xref="H-InvDB:HIT000096126"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4830546"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 557 a 647 c 704 g 508 t
ORIGIN
1 gccggtttgt taccctgccg ggtccggcgg ccgcccgggt ccggcgaggc ggggcggccc
61 ggggtcccga gggccgggtg cctccttacc tgcagccggg cggccgggcc ggggatggcg
121 ggcgccggcc gagggcgctg cttggctgcg gcggggagac cgggcctggg ttgcggcggg
181 cggcggcctg gccgggggcg ctgacagacg cgcggagggc gggggaggcc gggaggtgtc
241 acccggccca gcggggtgga agtgcctgga aagtttgttt tcggcttggc gcagcctgga
301 gccgagcctc cagggttacc tttcggttct gtctgtagag gaaccgccct gggcttccac
361 ctggaacggg gtccttggcg cctccgcctg cgagagaagc agaaggtgca agttcttgct
421 gaaagcacct gatgctcctg ggcccccttt tccagattct tgatgacagt ggtcgggaaa
481 actcgccttt cacggcccgg ccaaggggca tttgggtgct tttgctgccc gtggctgtgc
541 tcagcgttgt gggaagcccc tgggaggccg aatgtgcagg atcaccgagg ggaaagtgag
601 cttgacagta tgacgccgtg cccatccagt ccagcgtggt gttatgttcc tgcccatccc
661 catcaatggt gaggacccag actgagtcca gcacgccccc tggcattcct ggtggcagca
721 ggcagggccc cgccatggac ggcactgcag ccgagcctcg gcccggcgcc ggctccctgc
781 agcatgccca gcctccgccg cagcctcgga agaagcggcc tgaggacttc aagtttggga
841 aaatccttgg ggaaggctct ttttccacgg ttgtcctggc tcgagaactg gcaacctcca
901 gagaatatgc gattaaaatt ctggagaagc gacatatcat aaaagagaac aaggtcccct
961 atgtaaccag agagcgggat gtcatgtcgc gcctggatca ccccttcttt gttaagcttt
1021 acttcacatt tcaggacgac gagaagctgt atttcggcct tagttatgcc aaaaatggag
1081 aactacttaa atatattcgc aaaatcggtt cattcgatga gacctgtacc cgattttaca
1141 cggctgagat tgtgtctgct ttagagtact tgcacggcaa gggcatcatt cacagggacc
1201 ttaaaccgga aaacattttg ttaaatgaag atatgcacat ccagatcaca gattttggaa
1261 cagcaaaagt cttatcccca gagagcaaac aagccagggc caactcattc gtgggaacag
1321 cgcagtacgt ttctccagag ctgctcacgg agaagtccgc ctgtaagagt tcagaccttt
1381 gggctcttgg atgcataata taccagcttg tggcaggact cccaccattc cgagctggaa
1441 acgagtatct tatatttcag aagatcatta agttggaata tgactttcca gaaaaattct
1501 tccctaaggc aagagacctc gtggagaaac ttttggtttt agatgccaca aagcggttag
1561 gctgtgagga aatggaagga tacggacctc ttaaagcaca cccgttcttc gagtccgtca
1621 cgtgggagaa cctgcaccag cagacgcctc cgaagctcac cgcttacctg ccggctatgt
1681 cggaagacga cgaggactgc tatggcaatt atgacaatct cctgagccag tttggctgca
1741 tgcaggtgtc ttcgtcctcc tcctcacact ccctgtcagc ctccgacacg ggcctgcccc
1801 agaggtcagg cagcaacata gagcagtaca ttcacgatct ggactcgaac tcctttgaac
1861 tggacttaca gttttccgaa gatgagaaga ggttgttgtt ggagaagcag gctggcggaa
1921 acccttggca ccagtttgta gaaaataatt taatactaaa gatgggccca gtggataagc
1981 ggaagggttt atttgcaaga cgacgacagc tgttgctcac agaaggacca catttatatt
2041 atgtggatcc tgtcaacaaa gttctgaaag gtgaaattcc ttggtcacaa gaacttcgac
2101 cagaggccaa gaattttaaa actttctttg tccacacgcc taacaggacg tattatctga
2161 tggaccccag cgggaacgca cacaagtggt gcaggaagat ccaggaggtt tggaggcagc
2221 gataccagag ccacccggac gccgctgtgc agtgacgtgg cctgcggccg ggctgccctt
2281 cgctgccagg acacctgccc cagcgcggct tggccgccat ccgggacgct tccagaccac
2341 ctgccagcca tcacaagggg aacgcagagg cggaaacctt gcagcatttt tatttaaaag
2401 aaaaaaaaaa aaaaaa
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