LOCUS BC040285 3826 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens coiled-coil domain containing 14, mRNA (cDNA clone
MGC:42614 IMAGE:4825732), complete cds.
ACCESSION BC040285
VERSION BC040285.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3826)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3826)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: m Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255224
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..3826
/db_xref="H-InvDB:HIT000052363"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42614 IMAGE:4825732"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3826
/gene="CCDC14"
/db_xref="GeneID:64770"
/db_xref="HGNC:HGNC:25766"
CDS 500..2761
/gene="CCDC14"
/codon_start=1
/product="CCDC14 protein"
/protein_id="AAH40285.1"
/db_xref="GeneID:64770"
/db_xref="HGNC:HGNC:25766"
/translation="MYSPIIYQALCEHVQTQMSLMNDLTSKNIPNGIPAVPCHAPSHS
ESQATPHSSYGLCTSTPVWSLQRPPCPPKVHSEVQTDGNSQFASQGKTVSATCTDVLR
NSFNTSPGVPCSLPKTDISAIPTLQQLGLVNGILPQQGIHKETDLLKCIQTYLSLFRS
HGKEPHLDSQTHRSPTQSQPAFLATNEEKCAREQIREATSERKDLNIHVRDTKTVKDV
QKAKNVNKTAEKVRIIKYLLGELKALVAEQEDSEIQRLITEMEACISVLPTVSGNTDI
QVEIALAMQPLRSENAQLRRQLRILNQQLREQQKTQKPSGAVDCNLELFSLQSLNMSL
QNQLEESLKSQELLQSKNEELLKVIENQKDENKKFSSIFKDKDQTILENKQQYDIEIT
RIKIELEEALVNVKSSQFKLETAEKENQILGITLRQRDAEVTRLRELTRTLQTSMAKL
LSDLSVDSARCKPGNNLTKSLLNIHDKQLQHDPAPAHTSIMSYLNKLETNYSFTHSEP
LSTIKNEETIEPDKTYENVLSSRGPQNSNTRGMEEASAPGIISALSKQDSDEGSETMA
LIEDEHNLDNTIYIPFARSTPEKKSPLSKRLSPQPQIRAATTQLVSNSGLAVSGKENK
LCTPVICSSSTKEAEDAPEKLSRASDMKDTQLLKKIKEAIGKIPAATKEPEEQTACHG
PSGCLSNSLQVKGNTVCDGSVFTSDLMSDWSISSFSTFTSRDEQDFRNGLAALDANIA
RLQKSLRTGLLEK"
BASE COUNT 1282 a 710 c 750 g 1084 t
ORIGIN
1 ggcgtgcggg ccaagaaggt ccgggagccc acggcggtta attcttttta ccgtgaggct
61 tcacttccct cggtctgggc ttctctgagg cggcgagaga tggtcaggtc tggagctcga
121 ccgggccagg acctatttaa gaaaaatacc acgttttaat gcagattctg gctattccat
181 ccattctgat tcagaaagtc aggctgaaac tgtacacggg cttgatggtt gtgcttcttt
241 gctgagggac attttgagaa atgaagattc aggttcagaa acagcatatt tagaaaacag
301 atctaattct agacctttag aaagcaaaag atacggatca aaaaagaaaa gacatgaaaa
361 acatactatt cctttggtag tccagaaaga aacatcatct tcagataata agaaacagat
421 acctaatgaa gcttctgcta gaagtgaaag agacacatca gacctagagc aaaactggtc
481 attgcaagat cattatagaa tgtattcacc cataatatac caagccctct gtgagcacgt
541 gcagactcag atgtcactga tgaatgactt gacttcaaag aacatcccta atggaattcc
601 tgctgtacca tgccatgctc cctctcattc tgaatctcag gcaactcctc attctagtta
661 tggcttatgt acctccaccc cagtctggtc acttcagcgg ccaccctgcc ctccaaaggt
721 tcattctgaa gttcaaactg atggcaacag tcagtttgca tcacaaggta aaacagtttc
781 tgcaacctgt actgatgttc tacggaattc atttaatacc agtcctggag ttccatgtag
841 cctgcccaaa actgacatat cagctattcc aacattgcag caactgggcc ttgttaatgg
901 aattctgcca caacaaggaa ttcataagga aacagaccta ctaaaatgta ttcaaacata
961 tttgtctctt tttcgatctc atggaaaaga accgcatctg gacagtcaga cacaccgaag
1021 ccctactcag tcacaaccag ctttcttggc cactaatgaa gaaaaatgtg ccagagagca
1081 aattagagag gccacaagtg aaagaaagga tttaaacata catgtgcgag atacaaaaac
1141 agtgaaggat gtacagaagg caaaaaatgt gaacaagaca gctgaaaaag ttagaattat
1201 aaaatatttg ttgggagagc tcaaggccct ggtagcagaa caagaggatt cagaaattca
1261 gaggttgatt acagaaatgg aggcatgtat atctgtactt ccaacagtaa gtggaaacac
1321 agatattcaa gttgagatag cactggccat gcaaccatta agaagtgaga atgctcagtt
1381 acgaaggcag ttgagaattt tgaaccagca actcagagaa caacagaaaa ctcaaaaacc
1441 atctggtgct gtggattgca accttgaatt gttttctctt cagtcattga atatgtcact
1501 gcaaaatcaa ttggaggagt cactaaagag ccaggaatta ctgcagagta aaaatgaaga
1561 gctgttaaaa gtgattgaaa atcagaaaga tgaaaacaaa aaattcagta gtatatttaa
1621 agacaaagat caaactatac ttgaaaataa acagcaatat gatattgaga taacaagaat
1681 aaaaattgaa ttggaggaag ccctagtcaa tgtgaaaagc tcccagttta agttagaaac
1741 tgctgaaaag gaaaaccaga tattggggat aacattacgt cagcgtgatg ctgaggtgac
1801 tcgactaaga gaattaacca gaactttaca gactagcatg gcaaagcttc tctccgatct
1861 tagtgtggac agtgctcgct gcaagcctgg gaataacctt accaaatcac tcttgaacat
1921 tcatgataaa caacttcaac atgacccagc tcctgctcac acttccataa tgagctatct
1981 aaataagtta gaaacaaatt acagttttac acattcagag ccactttcta caattaaaaa
2041 tgaggaaacc atagagccag acaaaaccta tgaaaatgtt ctgtcctcca gaggccctca
2101 aaatagtaac actaggggca tggaggaagc atctgcacct ggaattattt ctgccctttc
2161 aaaacaggat tctgatgaag ggagtgaaac tatggcttta atagaagatg agcataattt
2221 ggataataca atttacattc cttttgctag aagcactcct gaaaagaaat caccactttc
2281 taagagacta tcccctcagc cacaaataag agcagctaca acacagctag tcagcaacag
2341 tggacttgct gtctctggaa aagaaaataa actgtgtaca cctgtaatct gttcctcttc
2401 aacaaaggaa gcagaagatg cacctgaaaa actttccaga gcatctgata tgaaggacac
2461 acagctcctc aagaaaataa aggaagcaat tggtaagatc cctgctgcca ccaaggagcc
2521 agaggaacaa actgcatgtc atggcccatc aggttgtctt agcaacagcc ttcaagtgaa
2581 aggcaatact gtctgtgatg gtagtgtttt cacttctgac ttgatgtctg actggagcat
2641 ctcttcgttt tcaacgttca cttctcgtga tgaacaagac ttcagaaatg gccttgcggc
2701 attagatgcc aacatagcta gactccagaa gtctttaagg actggtcttc tggagaaatg
2761 aattcagaag aaagttcatc aggtgcttct ttttaaaact agaacttggc tatattgaat
2821 gtgtattttt ctttagtgaa atgatgtttt atgttattat gtgtgaagta atatattgta
2881 caagtaataa atgtattgtt gagatatatt gacactgagg agcttataaa aacaagtcat
2941 cttaagttca caattgctac aagaagaaag ttgtggataa ctaggaaatt attgtaagta
3001 atgttttatt tcagtactta gcaattagag ttcttttatt aagatgtatc tgctggatta
3061 agggtacagg ttgaaatagt tctgtggctg tcctaagaaa taatgggaaa agaatctctg
3121 gatgtaagtt tttctgttga aactagaggg tttttttttt ctgtttacat atactttttt
3181 ttaatagcaa tgtgttttta ttaaacatgc tgtgtgccac aggccagtgt tgttggtgaa
3241 atatataaac atttatttaa agagaaaagt taccagtatc tacacctctt aaaaaacatt
3301 gattggtcta aaaaatatat agataacatc ctaagttaac atatggcttc ttaaaacttg
3361 ggcactttta tttgttttta tcccaaattc atgttttaag gcctttaaag aatagtcaga
3421 ctgataaaga agtgctaaca gataagctat agttggggaa atttgtgggt tttttttaaa
3481 taagaaatgt ttatttttgt ccttatattt aaacatgatg gaatttgtaa atcttggcat
3541 tgattgtaat tctgcctttt tggaaatttt ttctcccagc atgttagctg agaatattct
3601 ctattttata aataatatga agtaggttgg tctctctgct tctctatacc aggacttctt
3661 agctcagtat catctccctt catgtaagca gcacgtttta actcttagga agctgaatgt
3721 tgtgttatca ctaatacttt gtacaggtca cctgcctact ctaattgtcc ttagtacttg
3781 gacaggcttt atcattaaag agtgttctcc taaaaaaaaa aaaaaa
//