LOCUS BC040265 3021 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens WD repeat domain 63, mRNA (cDNA clone MGC:35051
IMAGE:5165779), complete cds.
ACCESSION BC040265
VERSION BC040265.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3021)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3021)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: l Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21553320.
FEATURES Location/Qualifiers
source 1..3021
/db_xref="H-InvDB:HIT000052358"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35051 IMAGE:5165779"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3021
/gene="WDR63"
/gene_synonym="FLJ30067"
/gene_synonym="NYD-SP29"
/gene_synonym="RP11-507C22.2"
/db_xref="GeneID:126820"
/db_xref="HGNC:HGNC:30711"
CDS 158..2833
/gene="WDR63"
/gene_synonym="FLJ30067"
/gene_synonym="NYD-SP29"
/gene_synonym="RP11-507C22.2"
/codon_start=1
/product="WD repeat domain 63"
/protein_id="AAH40265.1"
/db_xref="GeneID:126820"
/db_xref="HGNC:HGNC:30711"
/translation="MAPKQKKKTSRGKKRLKPVLAASEDMEPVNMESMGHPEIYPLVL
TTKTQEIFNCRIDEDVTDEQPYKLINKEDIFEDLRNRAAVSDFHPVKKIVQEYPGNEL
LLVYDKDFKYGLNFYLIATEEGKENYLNPPEVPEEQEEYKEHIPEDVYIYKPPVSKPW
VSLGSEKEIEEESVTESTKQITYMISRKRSEFGAPIKFSDQNASSVKDAYIECTAYPD
KNFTLKQLEKDVGMQVIPQIKDISTQTKWTYPKNATTQYYPREFSEEEKETLKQSKPL
VDFLNNASISVEIALQQNEIMNTFIDDWKYLAEEEGTFGDKTDTHLKEYQSFTDLHSP
TEKMITCVSWHPTIYGLIAVSVAVRLSFEDRVHFSGKLLLQPSLILFWSFSDPIHPQL
MLESPDDIFCFKFCPSDPNIIAGGCINGQIVMWDITAHADRIENIKAGGSRSKRATLK
PMFLLEPESNKEAMYIRHCAVSSIENGHKKVITDIHWLSDTFEINRMGSVFENRSGIC
CQLVTCSADCTICFWDIRPQKPLTPQTTEKKKEESIEIPFDVPSTFLHLDLSWKPLTK
VRLSKGETSLDHCPTKISLNEDHLLCKTQDKMLAQSKTEKAEEMNPYHNLESGMANLL
KPIDDFCTKFFVGTEEGEVIYTDWKMEKDPETGRLMSKKPVSHHTIHDGTVHTIQRSP
FYNDIILTVGGWNVAIWKEGVMTGPLLQSCCAPKRYTSGHWSLTRPGVFYIGREDGYI
DIWDLLEKTHEPAQSQNICITMITYIKPWIFSSKQQFIATADYYGTLHILEIPWTLSR
PSTNEMASVNHYFEREVKHLEYVEQRKKIREQEKKEMELEMAKKKVKTYQKSKEQMQA
ELKMDYESYLELEKTVLINLGLIKVTEKGSYMEVM"
BASE COUNT 1064 a 602 c 600 g 755 t
ORIGIN
1 agtcggcaga gttgctgcgg tttgtgccct tgcgatttct ttttctgaga gaggagagtc
61 aaactcccac ctccagctct cgaaggagct tttcctgagg gcactgcaaa gaggctcctt
121 ttctttcaga tcagcagtat cagcccaagt cagaaccatg gctccaaaac aaaagaaaaa
181 gacatcacgt ggcaaaaaaa gactaaaacc agtattagct gctagtgaag acatggaacc
241 agtaaatatg gagagcatgg gtcatccaga aatttatcct ttagtattaa ccaccaagac
301 ccaagaaata tttaactgcc gaatagatga agatgtcaca gatgaacaac cttataagct
361 tatcaataaa gaagacattt ttgaggacct gcgcaacaga gctgcagtat ctgatttcca
421 cccagtcaaa aaaattgtcc aggaatatcc tggaaatgag cttctgcttg tttatgacaa
481 agacttcaaa tatggactta acttttatct tattgcaact gaagagggca aagaaaacta
541 tttaaatccc ccagaagtac cagaagaaca agaagaatat aaagaacata ttcctgaaga
601 tgtgtatatt tataaaccac ctgtctctaa accatgggtt tctttgggca gtgaaaaaga
661 aattgaggaa gaatcagtta cggaatctac aaagcagatt acatatatga tttctcgaaa
721 acgaagtgaa tttggtgcac caattaagtt cagtgaccag aatgcttcca gtgtaaaaga
781 tgcctatatt gaatgtacag cctacccaga taaaaatttt acccttaaac aacttgaaaa
841 agatgttggc atgcaagtaa tcccccaaat aaaggacata agcactcaga caaaatggac
901 atatcctaaa aatgctacta cgcaatatta tccaagagaa ttctcagaag aggaaaaaga
961 gacactcaaa caatcaaagc ctttggttga ttttcttaac aatgcatcca taagtgttga
1021 aatagccctg cagcaaaatg aaatcatgaa cacatttatt gatgactgga aatacctcgc
1081 agaagaagaa ggcacctttg gggacaagac cgatacccac ctgaaagagt accagtcctt
1141 taccgacctt catagcccaa cggagaaaat gattacctgt gtctcatggc atccaactat
1201 ctatgggcta atagctgtgt cggtagccgt gcgactttct tttgaagaca gagttcactt
1261 ttctggtaaa ttattgctgc agccatcact gattcttttc tggagcttct ctgatcctat
1321 acatcctcag ttaatgctgg agagcccaga tgacatcttc tgcttcaagt tctgtccgag
1381 tgatcctaat atcattgctg gaggctgtat caatgggcag attgtcatgt gggatatcac
1441 cgcacatgca gatcgcatag aaaacattaa ggcaggtggt agtagaagta aaagagccac
1501 actgaagcct atgtttctcc ttgaaccgga gagtaataaa gaagcaatgt atatcagaca
1561 ctgtgcagtc tcttcaatag aaaatggaca taagaaagta attacagata tacactggtt
1621 gtctgacaca tttgagatta acagaatggg ctccgtcttt gagaatcgaa gtggaatatg
1681 ctgtcaactt gtcacatgtt cagcagattg cacaatatgt ttttgggata ttagaccaca
1741 gaaaccttta accccccaaa caacagagaa aaagaaggag gaaagtattg aaattccttt
1801 tgatgtacca tctacttttt tgcatctgga tctctcctgg aaacctctca ctaaggtaag
1861 gctgtccaag ggtgaaacaa gtttagacca ctgtccaacc aagataagcc tgaatgaaga
1921 ccatcttctt tgcaaaacac aagacaaaat gttagcacag agcaaaacag agaaggcaga
1981 agaaatgaac ccgtatcata atctggaaag tgggatggcc aatcttctca agccaataga
2041 tgacttctgc acaaagttct ttgtgggaac agaggaaggc gaagtgatat acacagattg
2101 gaaaatggaa aaagaccctg aaactggccg acttatgtca aagaagccag tgagccacca
2161 caccattcac gacggaactg tccacactat tcagagatca cctttctaca acgacattat
2221 tctcacggtt ggaggttgga acgtggccat atggaaagaa ggtgttatga ctggaccgct
2281 ccttcagtca tgctgtgcac caaaaaggta cacctcaggc cactggtccc tgactcggcc
2341 cggagttttc tacatcggcc gagaagatgg atacattgat atctgggacc ttctggagaa
2401 aacccatgaa ccagcccagt ctcaaaacat ttgcataact atgatcacct acatcaaacc
2461 ctggatcttt tcttctaaac agcaatttat agccacagct gattattatg gaacactgca
2521 tatattagaa attccttgga cattaagtcg cccttccacc aatgagatgg caagtgtcaa
2581 ccactatttt gaaagagaag tcaagcatct ggaatacgta gaacagcgca aaaaaattcg
2641 tgagcaagaa aagaaagaaa tggaactaga aatggcaaag aaaaaagtta aaacatatca
2701 gaagtcaaaa gaacaaatgc aggctgaatt aaaaatggac tatgagagtt atctggaact
2761 ggaaaagact gttcttatca accttggcct aatcaaagtc acagagaagg ggtcatacat
2821 ggaggtgatg taaaaaagct tcctgaaggg gtgttttggg gacttcttcc ctctatttat
2881 ttttatgtca ggtgaactgg catgctgaac atatatatat ataggctcat ttatagactt
2941 ttatttccct gctattaaaa cttttgaatt ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3001 aaaaaaaaaa aaaaaaaaaa a
//