LOCUS BC040264 2966 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens coiled-coil domain containing 57, mRNA (cDNA clone
MGC:34727 IMAGE:5165045), complete cds.
ACCESSION BC040264
VERSION BC040264.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2966)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2966)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: k Column: 18.
FEATURES Location/Qualifiers
source 1..2966
/db_xref="H-InvDB:HIT000052357"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34727 IMAGE:5165045"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2966
/gene="CCDC57"
/gene_synonym="FLJ00130"
/gene_synonym="FLJ23754"
/db_xref="GeneID:284001"
/db_xref="HGNC:HGNC:27564"
CDS 356..2611
/gene="CCDC57"
/gene_synonym="FLJ00130"
/gene_synonym="FLJ23754"
/codon_start=1
/product="coiled-coil domain containing 57"
/protein_id="AAH40264.1"
/db_xref="GeneID:284001"
/db_xref="HGNC:HGNC:27564"
/translation="MLPLGSEPALNELLLRKEEEWRALQAHRTQLQEAALQDTRSQLE
EAQGKLRCLQEDFVYNLQVLEERDLELERYDAAFAQAREWEEARRAEVSELKIEAAKL
RQALAREARKVEELQQQQQLAFQEHRLELERVHSDKNGEIDHHREQYENLKWTLERKL
EELDGELALQRQELLLEFESKMRKREHEFRLQADNMSNTALSRELKVKLLHKELEALK
EAGAKAAESLQRAEATNAELERKLQSRAGELQDLEAMSRARVKDLEDKLHSVQLTRKK
EEETFKRKHEELDRLAREKDAVLVAVKGAHVEQLQELQTRVLELQAHCETLEAQLRRA
EWRQADTAKEKDAAIDQLREDASTVKSAWDAQIAQLSKEMVSRDLQIQTLQEEEVKLK
AQVARSQQDIERYKQQLSLAVERERSLERDQVQLGLDWQRRCDDIERDQIQKSEALIQ
GLSMAKSQVAAKLQETEQALQEQEVVLKAMTLERDQAVQALRMHGLPRPGAQMLLRQH
EEEISKDFPSSEIQRLREQNTSLRNAIAQMRKEMEALSHQIPPPIQTAAESTDANQPD
PEAGGDAATPDYVLALEAEIRTLKHKFKTLEKHLEDVLDPLKMSSPHAESQPSVRTST
ETTGGSAQAGQAGGSVQAGQAGGSVQAGPVSSGLALRKLGDRVQLLNLLVTRLRQKVL
REPLEPAALQRELPREVDQVHLEVLELRKQVAELGKHLRIAQHGGAEPSGRKQPPASD
AVALGREVGAR"
BASE COUNT 783 a 776 c 928 g 479 t
ORIGIN
1 cctggccagc gctgctggcg ggcgttaggg tatttctgga aaactgaaac tgtttttcct
61 ctactctgat accacaagaa tcatcagcac agaggaagac ttctgtgatc aaatgtggtg
121 ggagagggag gttttcacca gcacatgagc agtcagttct gccgcagact cggcgggtgt
181 ccttcggttc agttccaaca ccgcctgcct ggagagaggt cagaccacag ggtgagggct
241 cagtccccaa gacataaaca cccaagacat aaacacccaa caggtccacc ccgcctgctg
301 cccaggcaga gccgattcac caagacggga attaggatag agaaagacgg ccaccatgct
361 gccactgggc tcagagcccg ccctgaatga gctgctgctt cgcaaggagg aggagtggag
421 ggcgctgcag gcacaccgca cccagctgca ggaggcggct ctgcaggaca cacggagcca
481 gctggaggag gcgcagggga aactgcggtg cctgcaggag gactttgtct acaaccttca
541 ggtgctggag gagcgggacc tcgagctgga gcgctatgac gccgccttcg cccaggccag
601 ggagtgggag gaggccaggc gggcagaggt gagcgagctc aagatagagg cagctaagct
661 gaggcaggcg ctagccagag aggccaggaa ggtggaggag ctgcagcagc agcagcagct
721 ggcattccag gagcatcgcc tggagctgga gcgcgtccac agtgacaaga atggtgagat
781 tgaccaccac cgggaacagt atgaaaatct aaaatggaca ctggagagaa aacttgagga
841 gctcgacggt gagcttgctc tgcagagaca ggaactgctg ctggagtttg aatcgaaaat
901 gcggaagagg gagcacgaat tccgtctgca ggctgacaac atgagcaaca cagccttgtc
961 ccgggagctt aaggttaaac tactgcacaa agagctggag gctctgaagg aagccggggc
1021 aaaggctgca gagagtctgc agagggcaga ggccaccaac gccgagctgg agaggaagct
1081 ccagagccga gccggggagc tccaggatct ggaggccatg agccgcgccc gggtaaagga
1141 tttagaggat aaacttcact ctgtgcagct aaccaggaag aaggaagagg aaacatttaa
1201 gaggaagcat gaggagctcg accgtctggc cagggagaag gatgcagtgc tggtggcggt
1261 gaagggagcc cacgtggagc agctgcagga gctgcagacc agggttctgg agctgcaggc
1321 ccactgcgag accctcgagg cgcagctccg cagggcagag tggagacagg ctgacaccgc
1381 caaggagaag gacgctgcca ttgaccaact tcgtgaagat gcatcaactg taaaatctgc
1441 ctgggatgct caaattgctc aactatctaa ggagatggtc tccagagacc ttcagattca
1501 gacgctgcag gaagaagagg tgaagctcaa ggcacaggtg gcccgatccc agcaggacat
1561 tgaaaggtac aagcaacagc tgtccctggc agtggaaagg gagcggagcc tggagcgtga
1621 tcaggtgcag ctgggcctgg actggcagcg ccgctgtgat gacattgaaa gggaccagat
1681 ccaaaagtca gaggccctga ttcagggtct gagcatggca aaaagtcagg ttgctgccaa
1741 gctgcaggag acagagcagg cgctacagga gcaggaggtg gtgctgaagg ccatgaccct
1801 ggaacgagac caggccgtgc aggccctgag gatgcatggg ctccccagac caggggcaca
1861 gatgcttctc aggcagcatg aagaagaaat aagtaaagac tttccatcca gtgagatcca
1921 gcggctccga gagcagaaca cgagcttgcg aaacgcgatt gcccagatga ggaaagaaat
1981 ggaggctcta agccatcaga ttcctcctcc catccagaca gcggcagaga gcacagatgc
2041 aaaccagcct gacccagagg ctgggggaga tgccgccact cctgattatg ttctggccct
2101 tgaagcagaa atacgaactc taaagcataa gtttaaaact ctggaaaagc atctagaaga
2161 tgtgttggat cctttaaaga tgtcctcacc tcatgctgag tctcagccca gcgtccgcac
2221 ctcgacagag acgactggag ggtctgccca agctggtcaa gccggagggt ctgtccaagc
2281 tggtcaagca ggaggatctg tccaagctgg cccagtatcc tctggactgg cactcaggaa
2341 gctcggggac agagtgcagc tcctaaacct gctggtgaca cgactcagac agaaggtgct
2401 gcgggaaccc ctggagccgg ccgctctcca gcgtgagctt ccccgtgagg tggaccaggt
2461 acacctggag gttttggagc tgcggaagca ggtggctgag ctggggaagc atctcaggat
2521 agcccagcac gggggagcgg agccttcagg caggaagcag cccccagcct cggacgccgt
2581 ggcccttggg agagaggtgg gtgcccgcta gctcctcctg ccacccgccg aggttcctgc
2641 cacagaaacc gtccttgcct gtgctctgcc agcgttgctg tctgtatgcc ctgggagctc
2701 aggtgggacg agggctgcag tgaaggccgt gcctggaagt gggccctgct ccaccccctc
2761 tccccattcc tctgccttct tcctccacac gcctcctctt ctcctggtcc ttcaccttga
2821 cgccccgttg gtggggggcg ggacgggccc atcccagtcc tcccttcagc taacagcatc
2881 ttgtgttgga aacgcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2941 aaaaaaaaaa aaaaaaaaaa aaaaaa
//