LOCUS BC040196 2970 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens chloride intracellular channel 6, mRNA (cDNA clone
IMAGE:4816168), partial cds.
ACCESSION BC040196
VERSION BC040196.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2970)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2970)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC040196.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 70 Row: o Column: 10.
FEATURES Location/Qualifiers
source 1..2970
/db_xref="H-InvDB:HIT000096061"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4816168"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2970
/gene="CLIC6"
/db_xref="GeneID:54102"
CDS <1..1227
/gene="CLIC6"
/codon_start=1
/product="CLIC6 protein"
/protein_id="AAH40196.1"
/db_xref="GeneID:54102"
/translation="SMDAEGPAGRARRVSGEPQQSGDGSLSPQAEAIEVAAGESAGRS
PGELAWDAAEEAEVPGVKGSEEAAPGDARADAGEDRVGDGPQQEPGEDEERRERSPEG
PREEEAAGGEEESPDSSPHGEASRGAAEPEAQLSNHLAEEGPAEGSGEAARVNGRRED
GEASEPRALGQEHDITLFVKAGYDGESIGNCPFSQRLFMILWLKGVIFNVTTVDLKRK
PADLQNLAPGTNPPFMTFDGEVKTDVNKIEEFLEEKLAPPRYPKLGTQHPESNSAGND
VFAKFSAFIKNTKKDANEIHEKNLLKALRKLDNYLNSPLPDEIDAYSTEDVTVSGRKF
LDGDELTLADCNLLPKLHIIKIVAKKYRDFEFPSEMTGIWRYLNNAYARDEFTNTCPA
DQEIEHAYSDVAKRMK"
BASE COUNT 798 a 665 c 769 g 738 t
ORIGIN
1 agtatggacg ccgagggtcc ggcaggaagg gcgcgccggg tctcgggtga gccgcagcaa
61 tcgggggacg gcagcctctc gccccaggcc gaggcaattg aggtcgcagc cggggagagt
121 gcggggcgca gccccggtga gctcgcctgg gacgcagcgg aggaggcgga ggtcccgggg
181 gtaaaggggt ccgaagaagc ggcccccggg gacgcaaggg cagacgctgg cgaggacagg
241 gtaggggatg ggccacagca ggagccgggg gaggacgaag agagacgaga gcggagcccg
301 gaggggccaa gggaggagga agcagcgggg ggcgaagagg aatcccccga cagcagccca
361 catggggagg cctccagggg cgccgcggag cctgaggccc agctcagcaa ccacctggcc
421 gaggagggcc ccgccgaggg tagcggcgag gccgcgcgcg tgaacggccg ccgggaggac
481 ggagaggcgt ccgagccccg ggccctgggg caggagcacg acatcaccct cttcgtcaag
541 gctggttatg atggtgagag tatcggaaat tgcccgtttt ctcagcgtct ctttatgatt
601 ctctggctga aaggcgttat atttaatgtg accacagtgg acctgaaaag gaaacccgca
661 gacctgcaga acctggctcc cggaacaaac cctcctttca tgacttttga tggtgaagtc
721 aagacggatg tgaataagat cgaggagttc ttagaggaga aattagctcc cccgaggtat
781 cccaagctgg ggacccaaca tcccgaatct aattccgcag gaaatgacgt gtttgccaaa
841 ttctcagcgt ttataaaaaa cacgaagaag gatgcaaatg agattcatga aaagaacctg
901 ctgaaggccc tgaggaagct ggataattac ttaaatagcc ctctgcctga tgaaatagat
961 gcctacagca ccgaggatgt cactgtttct ggaaggaagt ttctggatgg ggacgagctg
1021 acgctggctg actgcaacct cttacccaag ctccatatta ttaagattgt ggccaagaag
1081 tacagagatt ttgaatttcc ttctgaaatg actggcatct ggagatactt gaataatgct
1141 tatgctagag atgagttcac aaatacgtgt ccagctgatc aagagattga acacgcatat
1201 tcagatgttg caaaaagaat gaaatgaagc tgggctgttt tctgtcttat ttctcagttg
1261 agtgagcaag gatacgaaaa cagtgtgttt gaaaacaaat taggtttggg ttcaattcct
1321 tcaattttta aaaaactggt ctctgagagt tttttaaatc attgagagcc tgtttttctt
1381 ctctaaaaca ttagtttaat tttcttcaaa atgaaaatac tgctttgtaa ttacaaaatg
1441 agacacacct atcttgatat tttaaagcaa tatcagaggg tgtaaagaag gacattttaa
1501 caatcgcctt caattttact ccacttaatt accgaaaact tactggagaa catgttccaa
1561 atcttcagta tcttgttctc tctctctctc tctctctctc tatcacacac acacacacac
1621 acacacacac acaatttcat tcatatatgg tattgcatta ttttatttta aagcactggt
1681 gaggggacct cttggtgatt cctggatgat catacacaga ggacttacac catacaaaaa
1741 tattgggcac cgtagtgcca gagaagatgc ttgaggttag attttaagga gtggggaatt
1801 gtgaagccca cagatgcgca cgcaatgacc agcaggaacc ggaagccctg ggtcaccccc
1861 actctgcctc atttctgcct ccaggatgcc actgcctctg cttccaggaa aggcaagggg
1921 gagggtgctt atccgtgtct ctggttccag cttcctgtct ttgctccctc ccctctctta
1981 gagactgtgc cttcagcagg actcttaata tctgctgcaa cttggagaac ctccctgccc
2041 tgaaatgtga accaagcaca ctttggttcc ttctccgggc ggctctctct gagacccaag
2101 gctgcagtcc ctcagtgctg gtggtatcgt gtggggatag caatacttct ctgcccttca
2161 ttgtctcatc tagacatcaa gcagggaaaa tccagggaga ttaaattcat ggtgacaagt
2221 cctgggcagt tctggtagac ggtccagtta gggagggagt agaaactatt gactcaaaag
2281 agtttctggc tgatctgtgg ctttgcctcc accatcccta accaacctct catcacagct
2341 ttgtgtgtgg gctgagtgct ggccttaacc ctaggcgtgg aagagaaaat gtgaggttgt
2401 ttagatactc atcaggacct cacaggagct gagacttatc agccagaatg tgttcttcgg
2461 acagtcgtac acatcttaca gaaaaccctc cttgtagagt tggttgtggt atgtgtttga
2521 tgctataaag ctcattttta atgtgtacac ctgctctagg gacgattcgt ttgaaagaga
2581 gtaagatgca ttaacagaaa ctatcctggg attaggtgaa aaatgtctag caaaagaaac
2641 aaagtcttta atagagtggc ctctttcgct cttcgattat gactgctgca gttttacccc
2701 agcagtcagc tgtctttgtc aaccatacgt ttttggagat tgggtctagc acatgtcacc
2761 cttgtccacg ttgtttcaca tctggttagg gggcagattt taaaatgtag ttttgtaatg
2821 ttacatttaa gcatgataaa tgattagact accagatgtt actagtgcta actttgtatt
2881 cttagacatt aaaatgattg acataaactc tttgtgcctt gaaaatgaaa caaattataa
2941 aaatgtttaa atggaaaaaa aaaaaaaaaa
//