LOCUS BC040174 3745 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens phosphatidic acid phosphatase type 2, mRNA (cDNA clone
IMAGE:4793707), partial cds.
ACCESSION BC040174
VERSION BC040174.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3745)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3745)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 70 Row: c Column: 6.
FEATURES Location/Qualifiers
source 1..3745
/db_xref="H-InvDB:HIT000096043"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4793707"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..3745
/gene="PAP2D"
/gene_synonym="PAP2"
/db_xref="GeneID:163404"
CDS <1..910
/gene="PAP2D"
/gene_synonym="PAP2"
/codon_start=2
/product="PAP2D protein"
/protein_id="AAH40174.1"
/db_xref="GeneID:163404"
/translation="AEVVIMAGTVMLAYYFEYTDTFTVNVQGFFCHDSAYRKPYPGPE
DSSAVPPVLLYSLAAGVPVLVIIVGETAVFCLQLATRDFENQEKTILTGDCCYINPLV
RRTVRFLGIYTFGLFATDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQYTQFISGE
EACTGNPDLIMRARKTFPSKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLMC
LAFLTGLNRVAEYRNHWSDVIAGFLVGISIAVFLVVCVVNNFKGRQAENEHIHMDNLA
QMPMISIPRVESPLEKNHITAFAEVT"
BASE COUNT 1206 a 705 c 660 g 1174 t
ORIGIN
1 agcggaggtg gtgatcatgg cagggacggt gatgctggcg tactacttcg agtatacgga
61 cacgttcacc gtgaacgtgc agggcttctt ctgccacgac agcgcctacc gcaaaccata
121 cccgggcccg gaggacagca gcgccgtgcc ccccgtgctc ctctactcgc tggccgccgg
181 ggtccccgtg ctcgtgataa tagttggaga aactgctgtc ttttgcctac aactagccac
241 aagggatttt gaaaaccagg aaaaaactat tttaactgga gactgttgct atataaaccc
301 gctggtgcgc cgaactgtcc gatttcttgg aatttataca tttggactgt ttgctacaga
361 tatctttgta aatgctggac aagtagtcac aggaaatctg gccccacatt tccttgccct
421 gtgtaagccc aattatacag cacttggatg tcagcagtat acacaattca tcagtgggga
481 agaggcctgt actggcaacc cagatctcat catgagagcc cgaaaaacct ttccatccaa
541 agaagcagct ctcagtgtct atgcagctat gtatctgacc atgtacatca ccaacacaat
601 caaagccaag ggaaccagac ttgctaagcc agttctatgc ttgggcttaa tgtgtttggc
661 atttcttact ggactcaaca gagtagcaga atatcgaaat cattggtcag atgttatagc
721 aggctttctg gttggaatat ctatagcagt atttctggtt gtgtgcgtgg tgaataattt
781 caaagggaga caagcagaaa atgagcatat acacatggat aatctggcac agatgccaat
841 gatcagcatt cctcgagtag aaagtccttt ggaaaagaac cacatcactg ccttcgcaga
901 agtcacatga tatcgaagca gatggttttt cactgcattg gacatcatcc ctttttacca
961 tccattcata acacccaaag tttgtttgat tgcaagtgaa gtttataaag ttgtttaata
1021 atttttataa ttttaaaatc aatgtcaacc tatctgtttc ccccactaga ctgtgagctc
1081 ctcgagggca ggattgtctt tttttttctg tgtccccagc acttacaaca aagcctagca
1141 caaagtaggt gttcaacaaa aatgtgatga ccaaatgaac aaaattctta aataaaacat
1201 tcactttagt ttctcacaga atcattgcaa ttatgttaaa agaaatctct acataaatcg
1261 tatttgtgta tgaaaacctt ctattttggg ctagttattt ttttaatctt catatatcta
1321 ttcagcagta tgccatattt aatttgaagt ggactttgaa agtcatgggg gtttttattt
1381 tgttattcag catgacatta tttccattct aacatttcag tgtgtgaaat tactttattt
1441 ttagaaagta tgttctatag taaaataatg tttccacatt atattatgtt atatttcact
1501 taaaatacta ttcatactat acattctaag actggtgctt ctgcttttga aggggaaaat
1561 gccaattttt actgtaataa gtaatgtatc ataattaaaa attatttatt tggacttctt
1621 ctcctgacaa ttgtggctta attcatgact tgtttttgaa tgcaggcagt atttagggta
1681 gtttaaatga gtaaattcag cactggtacc ttattattga gtaatttccc atgggtagca
1741 gtgtctcaag agtggtcaaa agctccactc ttaggctttt ttactactaa agattccaca
1801 taatttaaat gggaaagaac tataccctga cacataattt aaattatata aatgctagaa
1861 atatggttaa tgtattttac tttgcatttg tgtagtactt tatagtttac aaagcatatt
1921 tacaccaatt attttatgta atcctcataa taacctggta taaacatgaa gggtatggct
1981 ttatttttat agataagaaa aatgaagcca agacagggta aataacatgc caaatcacaa
2041 actagtaaga gacatagttg aagcttaaat tcaagttttc tggccctgaa ctcatattcc
2101 tttctaatat agcacagctg tcatctcatt ttggacactg aggcctttca gagctcagta
2161 gaatcctggg caactaccta tggttcaaaa aataaagaaa tgccagaata caaatatgaa
2221 agctctgctg tattttaaat gtttatgttt taagaatgaa cacttttcaa atataaaact
2281 atataataat tataatccag ttttaagata atatcaagag tctagatgtg aggctttttg
2341 tgaaagagaa gcctaaattc agcatctccc cttccaccct cacccccagg tcccagcctc
2401 ccactcagca gagtgcccaa gggacatacc ttacatttag catgtagaat tcgagattac
2461 aatcgccata atataaggaa ggtgagctcc tcaacaataa ctttgcaata attaaaacta
2521 ccctaagtaa ctttggctta tatggcaaag taactttggc agtaattgac tgaaatgaat
2581 ctttctaaac tttacagtac taaagaaagc aaacttttaa tttcctctgt aatttcaaca
2641 gagatcagca aataaatata accaaagatt gtccattact ccccaaatag atgttatttg
2701 cccatttcta tcactgtgga agctaaaaca cttctactag ggccaaaaag agaaaagaaa
2761 agaaaatttc tactaatttc agacctctag agcaattcag tcctgttgga aatttagaac
2821 atgaagaaac tttgaatgtc ttgacccttt ttaaagattt tttaggcaat aacagtaata
2881 gggaattcac ttattgagaa tgaaagtgaa ggggatgatt ctaatgcctt agaaagctag
2941 attactagta aggcttccag acttctatca gttctattga ttctacatca gacttccaag
3001 cagccaagca ggaatgtttt ccctgttgga agccttagcc atatattctt atgtcaaggt
3061 tgcttctttg caccttgcta aacctgatac gaatgcagga gttttaaatt cttcaaaaac
3121 tcagatttaa cccagaacca gagtaaagtc acctctacta tttacacatc ataggctcaa
3181 gattgtacag tgagtgatgc tgtcatgaag aaaattcaga tgaaaaaggc aagatacatg
3241 tgaataaggc aaaagccaga aaatagccct tattcatgat gctgttactg agaataatga
3301 aaatcatatt tcagaaaata ttaccatgta aatatgtaca tatgtagtct agtaaaagca
3361 ggcaaacaca tatctttctg ataaaaacat ctccttttta ttctacttac ttggggccca
3421 ggtcagtata atttagtcaa cttgaaaatt tcggtagtct ctgtttgcat ggcagaaatt
3481 ctgcacatgt tttatctgat tcctgtgata acttaaaaag ctcttttatg ttaaaagaga
3541 ggtgaatctt ctttgacaga ctttgtattt tccacttcta actgggcctc tcttttctca
3601 ggatctatcc tagccaaata tctcagttac atttaccata cagtttcctt tgtgaaagaa
3661 cagtagggga ggaaataatt ctctgctgtg tattgtattt ttcaaataaa aatttaaaaa
3721 ttcaattgaa aaaaaaaaaa aaaaa
//